Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00204

Experiment: a-Cyclodextrin 2.5 mg/ml (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_00203 and BACOVA_00204 are separated by 8 nucleotidesBACOVA_00204 and BACOVA_00205 are separated by 28 nucleotidesBACOVA_00205 and BACOVA_00206 are separated by 102 nucleotides BACOVA_00203: BACOVA_00203 - DNA polymerase III, beta subunit, at 20,044 to 21,168 _00203 BACOVA_00204: BACOVA_00204 - hypothetical protein, at 21,177 to 21,293 _00204 BACOVA_00205: BACOVA_00205 - hypothetical protein, at 21,322 to 21,696 _00205 BACOVA_00206: BACOVA_00206 - hypothetical protein, at 21,799 to 23,373 _00206 Position (kb) 21 22Strain fitness (log2 ratio) -2 -1 0 1 2 3at 21.694 kb on + strandat 21.695 kb on - strandat 21.721 kb on + strandat 21.743 kb on - strandat 21.771 kb on + strandat 21.783 kb on - strandat 21.786 kb on + strandat 21.786 kb on + strandat 21.786 kb on + strandat 21.787 kb on - strandat 21.810 kb on + strandat 21.835 kb on + strandat 21.835 kb on + strandat 21.836 kb on - strandat 21.836 kb on - strandat 21.839 kb on - strandat 21.849 kb on + strandat 21.984 kb on - strand, within BACOVA_00206at 22.033 kb on - strand, within BACOVA_00206at 22.064 kb on + strand, within BACOVA_00206at 22.064 kb on + strand, within BACOVA_00206at 22.077 kb on + strand, within BACOVA_00206at 22.096 kb on + strand, within BACOVA_00206at 22.125 kb on - strand, within BACOVA_00206at 22.164 kb on + strand, within BACOVA_00206at 22.168 kb on + strand, within BACOVA_00206at 22.199 kb on + strand, within BACOVA_00206at 22.199 kb on + strand, within BACOVA_00206at 22.199 kb on + strand, within BACOVA_00206at 22.210 kb on + strand, within BACOVA_00206at 22.211 kb on - strand, within BACOVA_00206at 22.215 kb on + strand, within BACOVA_00206at 22.218 kb on - strand, within BACOVA_00206at 22.227 kb on + strand, within BACOVA_00206at 22.266 kb on + strand, within BACOVA_00206

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Per-strain Table

Position Strand Gene LocusTag Fraction a-Cyclodextrin 2.5 mg/ml (C)
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21,694 + -0.4
21,695 - +0.9
21,721 + -2.0
21,743 - +0.1
21,771 + +2.9
21,783 - -0.3
21,786 + +0.1
21,786 + -0.1
21,786 + -1.1
21,787 - -0.6
21,810 + -0.2
21,835 + +0.3
21,835 + +1.0
21,836 - -0.6
21,836 - +2.4
21,839 - +1.6
21,849 + -0.9
21,984 - BACOVA_00206 0.12 -0.8
22,033 - BACOVA_00206 0.15 -0.4
22,064 + BACOVA_00206 0.17 -2.4
22,064 + BACOVA_00206 0.17 -0.1
22,077 + BACOVA_00206 0.18 +2.6
22,096 + BACOVA_00206 0.19 -2.3
22,125 - BACOVA_00206 0.21 +0.2
22,164 + BACOVA_00206 0.23 -0.1
22,168 + BACOVA_00206 0.23 -0.6
22,199 + BACOVA_00206 0.25 +2.3
22,199 + BACOVA_00206 0.25 -1.6
22,199 + BACOVA_00206 0.25 -0.9
22,210 + BACOVA_00206 0.26 -0.9
22,211 - BACOVA_00206 0.26 -1.1
22,215 + BACOVA_00206 0.26 -0.4
22,218 - BACOVA_00206 0.27 -0.3
22,227 + BACOVA_00206 0.27 -0.8
22,266 + BACOVA_00206 0.30 +1.4

Or see this region's nucleotide sequence