Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00143

Experiment: a-Cyclodextrin 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin 2.5 mg/ml (C)
11,328	+		BACOVA_00141	0.18	-1.0
11,379	-		BACOVA_00141	0.24	-0.5
11,383	-		BACOVA_00141	0.25	-0.1
11,442	+		BACOVA_00141	0.32	-0.1
11,476	+		BACOVA_00141	0.36	-0.7
11,606	-		BACOVA_00141	0.52	-0.5
11,626	+		BACOVA_00141	0.55	+0.5
11,627	-		BACOVA_00141	0.55	+0.5
11,705	-		BACOVA_00141	0.65	+3.6
11,746	+		BACOVA_00141	0.70	-0.8
11,843	-		BACOVA_00141	0.82	+1.5
11,917	+				+1.3
11,942	+				-1.3
11,947	-				-0.8
11,947	-				-1.5
11,991	-				+0.3
11,991	-				+1.7
11,991	-				+1.8
11,998	-				-0.4
12,069	-		BACOVA_00142	0.48	-1.4
12,086	+		BACOVA_00142	0.63	+0.3
12,086	+		BACOVA_00142	0.63	-0.9
12,087	-		BACOVA_00142	0.64	+1.9
12,087	-		BACOVA_00142	0.64	+2.3
12,087	-		BACOVA_00142	0.64	+0.3
12,087	-		BACOVA_00142	0.64	+1.7
12,100	-		BACOVA_00142	0.76	+0.5
12,108	+		BACOVA_00142	0.83	-0.1
12,108	+		BACOVA_00142	0.83	+0.9
12,108	+		BACOVA_00142	0.83	-0.5
12,108	+		BACOVA_00142	0.83	+2.5
12,108	+		BACOVA_00142	0.83	-1.3
12,109	-		BACOVA_00142	0.84	+0.0
12,110	+		BACOVA_00142	0.85	-0.5
12,110	+		BACOVA_00142	0.85	+0.5
12,110	+		BACOVA_00142	0.85	+1.2
12,110	+		BACOVA_00142	0.85	+1.5
12,110	+		BACOVA_00142	0.85	+0.2
12,111	-		BACOVA_00142	0.86	-0.3
12,111	-		BACOVA_00142	0.86	+2.3
12,130	+				-0.1
12,130	+				-0.8
12,131	-				-0.5
12,131	-				-1.2
12,132	+				-0.3
12,132	+				+0.3
12,133	-				+0.9
12,133	-				+0.4
12,150	+				-0.3
12,150	+				-0.1
12,151	-				-0.4
12,151	-				+1.7
12,152	+				-0.9
12,152	+				-1.5
12,152	+				-0.8
12,154	+				+1.2
12,154	+				+2.9
12,154	+				+2.6
12,155	-				-0.1
12,155	-				-0.5
12,175	-				-0.1
12,177	-				-0.1
12,177	-				+0.0
12,195	-				-0.5
12,196	+				-0.9
12,197	-				-0.7
12,199	+				-0.3
12,200	-				-0.5
12,218	+				-0.3
12,218	+				-0.8
12,220	+				-0.6
12,225	+				+0.2
12,239	-				-0.3
12,243	+				-0.1
12,243	+				-0.7
12,248	-				+0.5
12,258	+				-1.1
12,400	+		BACOVA_00143	0.12	-0.6
12,476	+		BACOVA_00143	0.18	-0.0
12,477	-		BACOVA_00143	0.18	-1.0
12,477	-		BACOVA_00143	0.18	+0.2
12,530	+		BACOVA_00143	0.23	+1.2
12,530	+		BACOVA_00143	0.23	-0.7
12,531	-		BACOVA_00143	0.23	-2.7
12,531	-		BACOVA_00143	0.23	+0.3
12,532	+		BACOVA_00143	0.23	+2.0
12,584	+		BACOVA_00143	0.27	-1.0
12,645	-		BACOVA_00143	0.32	-1.0
12,645	-		BACOVA_00143	0.32	-0.8
12,705	-		BACOVA_00143	0.37	+0.4
12,705	-		BACOVA_00143	0.37	-0.4
12,705	-		BACOVA_00143	0.37	+1.8
12,706	+		BACOVA_00143	0.37	+2.1
12,710	-		BACOVA_00143	0.37	-0.1
12,751	+		BACOVA_00143	0.40	+0.0
12,833	+		BACOVA_00143	0.47	-0.1
12,839	-		BACOVA_00143	0.48	-0.7
12,852	-		BACOVA_00143	0.49	-1.7
12,852	-		BACOVA_00143	0.49	+0.7
12,866	+		BACOVA_00143	0.50	-0.1
12,867	-		BACOVA_00143	0.50	+3.5
12,874	-		BACOVA_00143	0.50	-0.1
12,926	-		BACOVA_00143	0.55	+0.0
12,926	-		BACOVA_00143	0.55	+0.6
12,926	-		BACOVA_00143	0.55	-0.8
12,930	-		BACOVA_00143	0.55	-0.6
13,001	+		BACOVA_00143	0.61	-1.8
13,078	+		BACOVA_00143	0.67	-0.3
13,137	+		BACOVA_00143	0.72	-3.5
13,138	-		BACOVA_00143	0.72	+0.2
13,138	-		BACOVA_00143	0.72	+0.1
13,187	-		BACOVA_00143	0.76	-1.0
13,187	-		BACOVA_00143	0.76	+0.1
13,193	+		BACOVA_00143	0.76	-0.7
13,193	+		BACOVA_00143	0.76	+0.2
13,197	+		BACOVA_00143	0.76	-2.0
13,197	+		BACOVA_00143	0.76	+1.1
13,198	-		BACOVA_00143	0.76	+0.5
13,198	-		BACOVA_00143	0.76	-0.7
13,216	+		BACOVA_00143	0.78	+1.5
13,266	+		BACOVA_00143	0.82	+1.5
13,352	+		BACOVA_00143	0.89	-1.2
13,370	+				+0.2
13,373	-				-0.3
13,373	-				-0.8
13,376	+				+0.8
13,376	+				-0.0
13,377	-				+1.5
13,379	+				+0.5
13,380	-				-0.8
13,408	+				+0.0
13,436	+				-1.2
13,436	+				-0.4
13,437	-				+0.3
13,437	-				-2.5
13,488	-				-0.1
13,510	+				+0.7
13,557	+				+1.8
13,558	-				+1.4
13,591	-				-1.0
13,597	+				+0.6
13,658	+				-1.0
13,689	+				+1.5
13,689	+				-2.7
13,689	+				-0.6
13,690	-				-1.5
13,718	+				+1.1
13,718	+				-2.1
13,719	-				-0.7
13,733	-				-0.5
13,733	-				-0.4
13,740	-				-0.4
13,804	+		BACOVA_00144	0.13	+0.7
13,804	+		BACOVA_00144	0.13	-0.3
13,809	+		BACOVA_00144	0.14	+1.5
13,852	+		BACOVA_00144	0.22	-0.6
13,853	-		BACOVA_00144	0.22	+0.7
13,853	-		BACOVA_00144	0.22	-0.1
13,886	+		BACOVA_00144	0.28	-0.1
13,886	+		BACOVA_00144	0.28	+0.1
13,889	+		BACOVA_00144	0.29	+0.7
13,918	+		BACOVA_00144	0.34	+0.6
13,922	+		BACOVA_00144	0.35	-1.2
13,925	+		BACOVA_00144	0.35	-0.1
13,943	-		BACOVA_00144	0.39	-0.1
13,943	-		BACOVA_00144	0.39	-0.2
13,960	+		BACOVA_00144	0.42	-0.4
13,960	+		BACOVA_00144	0.42	-2.0
13,961	-		BACOVA_00144	0.42	+1.5
13,961	-		BACOVA_00144	0.42	-0.3
13,961	-		BACOVA_00144	0.42	-1.6
13,964	+		BACOVA_00144	0.42	-0.3
13,964	+		BACOVA_00144	0.42	+0.9
13,964	+		BACOVA_00144	0.42	-1.1
13,965	-		BACOVA_00144	0.43	-1.0
13,965	-		BACOVA_00144	0.43	-0.1
13,965	-		BACOVA_00144	0.43	-0.3
13,983	+		BACOVA_00144	0.46	-0.1
13,984	-		BACOVA_00144	0.46	+1.4
13,989	-		BACOVA_00144	0.47	-0.1
13,991	-		BACOVA_00144	0.47	+3.2
13,991	-		BACOVA_00144	0.47	+0.2
14,021	+		BACOVA_00144	0.53	+0.5
14,031	+		BACOVA_00144	0.55	-0.7
14,032	-		BACOVA_00144	0.55	-0.8
14,069	-		BACOVA_00144	0.62	+1.2
14,094	+		BACOVA_00144	0.66	+2.4
14,140	+		BACOVA_00144	0.74	+0.9
14,157	+		BACOVA_00144	0.78	-0.9
14,158	-		BACOVA_00144	0.78	+0.1
14,158	-		BACOVA_00144	0.78	+2.1
14,160	+		BACOVA_00144	0.78	-0.1
14,170	-		BACOVA_00144	0.80	+0.5
14,201	+		BACOVA_00144	0.86	-0.7
14,253	-				+2.2
14,260	-				-0.8
14,260	-				+0.0
14,291	-				+0.7
14,291	-				-1.3
14,472	+		BACOVA_00145	0.31	-0.3
14,473	-		BACOVA_00145	0.31	-1.3