Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00141

Experiment: a-Cyclodextrin 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin 2.5 mg/ml (C)
10,187	+		BACOVA_00139	0.65	+1.5
10,262	+				+0.2
10,262	+				+0.2
10,262	+				-1.7
10,262	+				+1.6
10,262	+				+1.5
10,283	+				-1.4
10,284	-				-0.1
10,287	+				+1.1
10,287	+				-0.9
10,293	+				+0.3
10,293	+				-0.3
10,297	+				+1.7
10,297	+				+0.1
10,297	+				+1.5
10,400	+		BACOVA_00140	0.12	-0.2
10,400	+		BACOVA_00140	0.12	-0.9
10,418	+		BACOVA_00140	0.14	-0.9
10,418	+		BACOVA_00140	0.14	+1.1
10,422	+		BACOVA_00140	0.14	+1.3
10,428	-		BACOVA_00140	0.15	+2.3
10,428	-		BACOVA_00140	0.15	+1.5
10,428	-		BACOVA_00140	0.15	+0.3
10,429	+		BACOVA_00140	0.15	-0.6
10,454	+		BACOVA_00140	0.18	+2.5
10,454	+		BACOVA_00140	0.18	-2.0
10,455	-		BACOVA_00140	0.18	+0.5
10,455	-		BACOVA_00140	0.18	+0.4
10,549	+		BACOVA_00140	0.29	-1.3
10,549	+		BACOVA_00140	0.29	-0.8
10,550	-		BACOVA_00140	0.29	-1.3
10,550	-		BACOVA_00140	0.29	-0.8
10,606	+		BACOVA_00140	0.36	-0.6
10,621	+		BACOVA_00140	0.38	+0.2
10,687	+		BACOVA_00140	0.46	-0.1
10,751	+		BACOVA_00140	0.53	-0.1
10,751	+		BACOVA_00140	0.53	+0.1
10,827	+		BACOVA_00140	0.62	-0.5
10,898	+		BACOVA_00140	0.71	+1.9
10,921	+		BACOVA_00140	0.73	-0.0
10,921	+		BACOVA_00140	0.73	+0.9
10,921	+		BACOVA_00140	0.73	+0.2
10,921	+		BACOVA_00140	0.73	-0.8
10,928	-		BACOVA_00140	0.74	+0.9
11,065	+				+1.8
11,066	-				-1.8
11,068	-				-0.5
11,073	+				-0.4
11,130	+				-1.3
11,130	+				+0.2
11,150	+				-0.3
11,150	+				+1.0
11,151	-				+0.5
11,155	+				+0.3
11,156	-				+0.7
11,328	+		BACOVA_00141	0.18	-1.0
11,379	-		BACOVA_00141	0.24	-0.5
11,383	-		BACOVA_00141	0.25	-0.1
11,442	+		BACOVA_00141	0.32	-0.1
11,476	+		BACOVA_00141	0.36	-0.7
11,606	-		BACOVA_00141	0.52	-0.5
11,626	+		BACOVA_00141	0.55	+0.5
11,627	-		BACOVA_00141	0.55	+0.5
11,705	-		BACOVA_00141	0.65	+3.6
11,746	+		BACOVA_00141	0.70	-0.8
11,843	-		BACOVA_00141	0.82	+1.5
11,917	+				+1.3
11,942	+				-1.3
11,947	-				-0.8
11,947	-				-1.5
11,991	-				+0.3
11,991	-				+1.7
11,991	-				+1.8
11,998	-				-0.4
12,069	-		BACOVA_00142	0.48	-1.4
12,086	+		BACOVA_00142	0.63	+0.3
12,086	+		BACOVA_00142	0.63	-0.9
12,087	-		BACOVA_00142	0.64	+1.9
12,087	-		BACOVA_00142	0.64	+2.3
12,087	-		BACOVA_00142	0.64	+0.3
12,087	-		BACOVA_00142	0.64	+1.7
12,100	-		BACOVA_00142	0.76	+0.5
12,108	+		BACOVA_00142	0.83	-0.1
12,108	+		BACOVA_00142	0.83	+0.9
12,108	+		BACOVA_00142	0.83	-0.5
12,108	+		BACOVA_00142	0.83	+2.5
12,108	+		BACOVA_00142	0.83	-1.3
12,109	-		BACOVA_00142	0.84	+0.0
12,110	+		BACOVA_00142	0.85	-0.5
12,110	+		BACOVA_00142	0.85	+0.5
12,110	+		BACOVA_00142	0.85	+1.2
12,110	+		BACOVA_00142	0.85	+1.5
12,110	+		BACOVA_00142	0.85	+0.2
12,111	-		BACOVA_00142	0.86	-0.3
12,111	-		BACOVA_00142	0.86	+2.3
12,130	+				-0.1
12,130	+				-0.8
12,131	-				-0.5
12,131	-				-1.2
12,132	+				-0.3
12,132	+				+0.3
12,133	-				+0.9
12,133	-				+0.4
12,150	+				-0.3
12,150	+				-0.1
12,151	-				-0.4
12,151	-				+1.7
12,152	+				-0.9
12,152	+				-1.5
12,152	+				-0.8
12,154	+				+1.2
12,154	+				+2.9
12,154	+				+2.6
12,155	-				-0.1
12,155	-				-0.5
12,175	-				-0.1
12,177	-				-0.1
12,177	-				+0.0
12,195	-				-0.5
12,196	+				-0.9
12,197	-				-0.7
12,199	+				-0.3
12,200	-				-0.5
12,218	+				-0.3
12,218	+				-0.8
12,220	+				-0.6
12,225	+				+0.2
12,239	-				-0.3
12,243	+				-0.1
12,243	+				-0.7
12,248	-				+0.5
12,258	+				-1.1
12,400	+		BACOVA_00143	0.12	-0.6
12,476	+		BACOVA_00143	0.18	-0.0
12,477	-		BACOVA_00143	0.18	-1.0
12,477	-		BACOVA_00143	0.18	+0.2
12,530	+		BACOVA_00143	0.23	+1.2
12,530	+		BACOVA_00143	0.23	-0.7
12,531	-		BACOVA_00143	0.23	-2.7
12,531	-		BACOVA_00143	0.23	+0.3
12,532	+		BACOVA_00143	0.23	+2.0
12,584	+		BACOVA_00143	0.27	-1.0
12,645	-		BACOVA_00143	0.32	-1.0
12,645	-		BACOVA_00143	0.32	-0.8
12,705	-		BACOVA_00143	0.37	+0.4
12,705	-		BACOVA_00143	0.37	-0.4
12,705	-		BACOVA_00143	0.37	+1.8
12,706	+		BACOVA_00143	0.37	+2.1
12,710	-		BACOVA_00143	0.37	-0.1
12,751	+		BACOVA_00143	0.40	+0.0
12,833	+		BACOVA_00143	0.47	-0.1
12,839	-		BACOVA_00143	0.48	-0.7
12,852	-		BACOVA_00143	0.49	-1.7
12,852	-		BACOVA_00143	0.49	+0.7
12,866	+		BACOVA_00143	0.50	-0.1
12,867	-		BACOVA_00143	0.50	+3.5
12,874	-		BACOVA_00143	0.50	-0.1
12,926	-		BACOVA_00143	0.55	+0.0
12,926	-		BACOVA_00143	0.55	+0.6
12,926	-		BACOVA_00143	0.55	-0.8
12,930	-		BACOVA_00143	0.55	-0.6