Experiment: Hyaluronic from Streptococcus equi 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_05203 and BACOVA_05204 are separated by 103 nucleotides BACOVA_05204 and BACOVA_05205 are separated by 18 nucleotides
BACOVA_05203: BACOVA_05203 - tetratricopeptide repeat protein, at 703,188 to 706,541
_05203
BACOVA_05204: BACOVA_05204 - 23S rRNA m2A2503 methyltransferase, at 706,645 to 707,679
_05204
BACOVA_05205: BACOVA_05205 - hypothetical protein, at 707,698 to 708,738
_05205
Position (kb) 706
707
708 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 705.648 kb on + strand, within BACOVA_05203 at 705.648 kb on + strand, within BACOVA_05203 at 705.648 kb on + strand, within BACOVA_05203 at 705.688 kb on - strand, within BACOVA_05203 at 705.744 kb on + strand, within BACOVA_05203 at 705.765 kb on + strand, within BACOVA_05203 at 705.765 kb on + strand, within BACOVA_05203 at 705.766 kb on - strand, within BACOVA_05203 at 705.767 kb on + strand, within BACOVA_05203 at 705.768 kb on - strand, within BACOVA_05203 at 705.892 kb on - strand, within BACOVA_05203 at 705.950 kb on - strand, within BACOVA_05203 at 705.997 kb on - strand, within BACOVA_05203 at 705.999 kb on + strand, within BACOVA_05203 at 705.999 kb on + strand, within BACOVA_05203 at 706.000 kb on - strand, within BACOVA_05203 at 706.000 kb on - strand, within BACOVA_05203 at 706.000 kb on - strand, within BACOVA_05203 at 706.004 kb on - strand, within BACOVA_05203 at 706.060 kb on + strand, within BACOVA_05203 at 706.061 kb on - strand, within BACOVA_05203 at 706.092 kb on + strand, within BACOVA_05203 at 706.092 kb on + strand, within BACOVA_05203 at 706.155 kb on - strand, within BACOVA_05203 at 706.170 kb on + strand, within BACOVA_05203 at 706.171 kb on - strand, within BACOVA_05203 at 706.178 kb on + strand, within BACOVA_05203 at 706.186 kb on - strand, within BACOVA_05203 at 706.242 kb on - strand at 706.258 kb on + strand at 706.259 kb on - strand at 706.260 kb on + strand at 706.260 kb on + strand at 706.281 kb on + strand at 706.282 kb on - strand at 706.300 kb on - strand at 706.350 kb on + strand at 706.351 kb on - strand at 706.374 kb on - strand at 706.458 kb on + strand at 706.459 kb on - strand at 706.518 kb on + strand at 706.518 kb on + strand at 706.518 kb on + strand at 706.520 kb on + strand at 706.551 kb on - strand at 706.551 kb on - strand at 706.573 kb on + strand at 706.601 kb on + strand at 706.623 kb on + strand at 706.623 kb on + strand at 706.710 kb on + strand at 706.710 kb on + strand at 706.779 kb on + strand, within BACOVA_05204 at 706.868 kb on + strand, within BACOVA_05204 at 706.885 kb on + strand, within BACOVA_05204 at 706.893 kb on + strand, within BACOVA_05204 at 706.893 kb on + strand, within BACOVA_05204 at 706.893 kb on + strand, within BACOVA_05204 at 706.927 kb on + strand, within BACOVA_05204 at 707.020 kb on + strand, within BACOVA_05204 at 707.022 kb on + strand, within BACOVA_05204 at 707.022 kb on + strand, within BACOVA_05204 at 707.022 kb on + strand, within BACOVA_05204 at 707.022 kb on + strand, within BACOVA_05204 at 707.051 kb on + strand, within BACOVA_05204 at 707.051 kb on + strand, within BACOVA_05204 at 707.051 kb on + strand, within BACOVA_05204 at 707.091 kb on + strand, within BACOVA_05204 at 707.099 kb on + strand, within BACOVA_05204 at 707.099 kb on + strand, within BACOVA_05204 at 707.099 kb on + strand, within BACOVA_05204 at 707.379 kb on + strand, within BACOVA_05204 at 707.544 kb on + strand, within BACOVA_05204 at 707.917 kb on + strand, within BACOVA_05205 at 708.590 kb on + strand, within BACOVA_05205
Per-strain Table
Position Strand Gene LocusTag Fraction Hyaluronic from Streptococcus equi 2.5 mg/ml (C) remove 705,648 + BACOVA_05203 0.73 +2.5 705,648 + BACOVA_05203 0.73 -0.5 705,648 + BACOVA_05203 0.73 +1.4 705,688 - BACOVA_05203 0.75 +0.4 705,744 + BACOVA_05203 0.76 +1.0 705,765 + BACOVA_05203 0.77 -1.6 705,765 + BACOVA_05203 0.77 -1.3 705,766 - BACOVA_05203 0.77 +3.2 705,767 + BACOVA_05203 0.77 -1.3 705,768 - BACOVA_05203 0.77 +0.5 705,892 - BACOVA_05203 0.81 -1.6 705,950 - BACOVA_05203 0.82 +0.5 705,997 - BACOVA_05203 0.84 +0.0 705,999 + BACOVA_05203 0.84 -1.5 705,999 + BACOVA_05203 0.84 +2.6 706,000 - BACOVA_05203 0.84 -2.2 706,000 - BACOVA_05203 0.84 -0.1 706,000 - BACOVA_05203 0.84 -2.6 706,004 - BACOVA_05203 0.84 -0.2 706,060 + BACOVA_05203 0.86 -1.6 706,061 - BACOVA_05203 0.86 +0.9 706,092 + BACOVA_05203 0.87 -0.5 706,092 + BACOVA_05203 0.87 +1.6 706,155 - BACOVA_05203 0.88 -2.5 706,170 + BACOVA_05203 0.89 +3.7 706,171 - BACOVA_05203 0.89 +1.5 706,178 + BACOVA_05203 0.89 -1.6 706,186 - BACOVA_05203 0.89 +3.0 706,242 - +0.7 706,258 + -2.4 706,259 - -1.1 706,260 + -1.3 706,260 + -2.1 706,281 + +0.1 706,282 - +1.0 706,300 - +0.9 706,350 + +0.5 706,351 - -1.3 706,374 - +1.4 706,458 + -0.1 706,459 - -1.7 706,518 + -1.8 706,518 + -1.3 706,518 + -2.1 706,520 + -0.1 706,551 - +3.7 706,551 - -1.1 706,573 + +1.5 706,601 + -1.3 706,623 + -1.5 706,623 + -1.1 706,710 + -1.2 706,710 + -1.9 706,779 + BACOVA_05204 0.13 +0.5 706,868 + BACOVA_05204 0.22 -1.7 706,885 + BACOVA_05204 0.23 -3.4 706,893 + BACOVA_05204 0.24 +0.5 706,893 + BACOVA_05204 0.24 -1.5 706,893 + BACOVA_05204 0.24 -1.5 706,927 + BACOVA_05204 0.27 -0.5 707,020 + BACOVA_05204 0.36 -0.5 707,022 + BACOVA_05204 0.36 +2.7 707,022 + BACOVA_05204 0.36 -0.5 707,022 + BACOVA_05204 0.36 -0.1 707,022 + BACOVA_05204 0.36 -3.1 707,051 + BACOVA_05204 0.39 -0.6 707,051 + BACOVA_05204 0.39 -1.8 707,051 + BACOVA_05204 0.39 +0.3 707,091 + BACOVA_05204 0.43 -2.6 707,099 + BACOVA_05204 0.44 -2.3 707,099 + BACOVA_05204 0.44 -2.6 707,099 + BACOVA_05204 0.44 +0.5 707,379 + BACOVA_05204 0.71 +3.1 707,544 + BACOVA_05204 0.87 -0.8 707,917 + BACOVA_05205 0.21 +0.5 708,590 + BACOVA_05205 0.86 -0.5
Or see this region's nucleotide sequence