Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_04513

Experiment: Hyaluronic from Streptococcus equi 2.5 mg/ml (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_04511 and BACOVA_04512 are separated by 105 nucleotidesBACOVA_04512 and BACOVA_04513 overlap by 20 nucleotidesBACOVA_04513 and BACOVA_04514 are separated by 191 nucleotides BACOVA_04511: BACOVA_04511 - hypothetical protein, at 451,149 to 451,676 _04511 BACOVA_04512: BACOVA_04512 - hypothetical protein, at 451,782 to 452,111 _04512 BACOVA_04513: BACOVA_04513 - kelch repeat protein, at 452,092 to 453,150 _04513 BACOVA_04514: BACOVA_04514 - hypothetical protein, at 453,342 to 454,667 _04514 Position (kb) 452 453 454Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 451.098 kb on - strandat 451.156 kb on + strandat 451.156 kb on + strandat 451.296 kb on - strand, within BACOVA_04511at 451.314 kb on - strand, within BACOVA_04511at 451.319 kb on + strand, within BACOVA_04511at 451.319 kb on + strand, within BACOVA_04511at 451.320 kb on - strand, within BACOVA_04511at 451.348 kb on - strand, within BACOVA_04511at 451.353 kb on + strand, within BACOVA_04511at 451.353 kb on + strand, within BACOVA_04511at 451.358 kb on + strand, within BACOVA_04511at 451.360 kb on + strand, within BACOVA_04511at 451.361 kb on - strand, within BACOVA_04511at 451.381 kb on + strand, within BACOVA_04511at 451.381 kb on + strand, within BACOVA_04511at 451.381 kb on + strand, within BACOVA_04511at 451.382 kb on - strand, within BACOVA_04511at 451.394 kb on + strand, within BACOVA_04511at 451.395 kb on - strand, within BACOVA_04511at 451.432 kb on + strand, within BACOVA_04511at 451.432 kb on + strand, within BACOVA_04511at 451.433 kb on - strand, within BACOVA_04511at 451.433 kb on - strand, within BACOVA_04511at 451.439 kb on + strand, within BACOVA_04511at 451.439 kb on + strand, within BACOVA_04511at 451.439 kb on + strand, within BACOVA_04511at 451.440 kb on - strand, within BACOVA_04511at 451.440 kb on - strand, within BACOVA_04511at 451.442 kb on + strand, within BACOVA_04511at 451.443 kb on - strand, within BACOVA_04511at 451.522 kb on - strand, within BACOVA_04511at 451.617 kb on + strand, within BACOVA_04511at 451.642 kb on - strandat 451.642 kb on - strandat 451.645 kb on + strandat 451.685 kb on + strandat 451.685 kb on + strandat 451.693 kb on + strandat 451.709 kb on - strandat 451.751 kb on - strandat 451.772 kb on + strandat 451.772 kb on + strandat 451.773 kb on - strandat 451.787 kb on - strandat 451.821 kb on + strand, within BACOVA_04512at 451.860 kb on + strand, within BACOVA_04512at 451.926 kb on - strand, within BACOVA_04512at 451.942 kb on - strand, within BACOVA_04512at 451.942 kb on - strand, within BACOVA_04512at 452.032 kb on + strand, within BACOVA_04512at 452.033 kb on - strand, within BACOVA_04512at 452.038 kb on + strand, within BACOVA_04512at 452.038 kb on + strand, within BACOVA_04512at 452.039 kb on - strand, within BACOVA_04512at 452.039 kb on - strand, within BACOVA_04512at 452.039 kb on - strand, within BACOVA_04512at 452.076 kb on - strand, within BACOVA_04512at 452.078 kb on + strand, within BACOVA_04512at 452.079 kb on - strandat 452.079 kb on - strandat 452.105 kb on + strandat 452.106 kb on - strandat 452.130 kb on + strandat 452.130 kb on + strandat 452.145 kb on - strandat 452.145 kb on - strandat 452.164 kb on - strandat 452.167 kb on + strandat 452.169 kb on + strandat 452.215 kb on - strand, within BACOVA_04513at 452.270 kb on + strand, within BACOVA_04513at 452.280 kb on - strand, within BACOVA_04513at 452.292 kb on - strand, within BACOVA_04513at 452.292 kb on - strand, within BACOVA_04513at 452.296 kb on - strand, within BACOVA_04513at 452.296 kb on - strand, within BACOVA_04513at 452.358 kb on - strand, within BACOVA_04513at 452.370 kb on + strand, within BACOVA_04513at 452.391 kb on - strand, within BACOVA_04513at 452.406 kb on + strand, within BACOVA_04513at 452.504 kb on + strand, within BACOVA_04513at 452.505 kb on - strand, within BACOVA_04513at 452.505 kb on - strand, within BACOVA_04513at 452.509 kb on + strand, within BACOVA_04513at 452.509 kb on + strand, within BACOVA_04513at 452.509 kb on + strand, within BACOVA_04513at 452.509 kb on + strand, within BACOVA_04513at 452.586 kb on + strand, within BACOVA_04513at 452.586 kb on + strand, within BACOVA_04513at 452.628 kb on - strand, within BACOVA_04513at 452.640 kb on - strand, within BACOVA_04513at 452.640 kb on - strand, within BACOVA_04513at 452.687 kb on + strand, within BACOVA_04513at 452.687 kb on + strand, within BACOVA_04513at 452.687 kb on + strand, within BACOVA_04513at 452.687 kb on + strand, within BACOVA_04513at 452.688 kb on - strand, within BACOVA_04513at 452.688 kb on - strand, within BACOVA_04513at 452.688 kb on - strand, within BACOVA_04513at 452.703 kb on - strand, within BACOVA_04513at 452.703 kb on - strand, within BACOVA_04513at 452.703 kb on - strand, within BACOVA_04513at 452.706 kb on + strand, within BACOVA_04513at 452.706 kb on + strand, within BACOVA_04513at 452.706 kb on + strand, within BACOVA_04513at 452.771 kb on + strand, within BACOVA_04513at 452.826 kb on + strand, within BACOVA_04513at 452.827 kb on - strand, within BACOVA_04513at 452.827 kb on - strand, within BACOVA_04513at 452.828 kb on + strand, within BACOVA_04513at 452.843 kb on - strand, within BACOVA_04513at 452.843 kb on - strand, within BACOVA_04513at 452.843 kb on - strand, within BACOVA_04513at 452.856 kb on + strand, within BACOVA_04513at 452.895 kb on + strand, within BACOVA_04513at 452.896 kb on - strand, within BACOVA_04513at 452.896 kb on - strand, within BACOVA_04513at 452.984 kb on + strand, within BACOVA_04513at 452.985 kb on - strand, within BACOVA_04513at 452.989 kb on + strand, within BACOVA_04513at 452.990 kb on - strand, within BACOVA_04513at 453.069 kb on + strandat 453.072 kb on - strandat 453.075 kb on - strandat 453.087 kb on + strandat 453.087 kb on + strandat 453.133 kb on - strandat 453.150 kb on + strandat 453.154 kb on + strandat 453.155 kb on - strandat 453.155 kb on - strandat 453.167 kb on - strandat 453.230 kb on + strandat 453.230 kb on + strandat 453.231 kb on - strandat 453.231 kb on - strandat 453.235 kb on - strandat 453.293 kb on - strandat 453.339 kb on + strandat 453.355 kb on + strandat 453.355 kb on + strandat 453.356 kb on - strandat 453.356 kb on - strandat 453.376 kb on + strandat 453.400 kb on + strandat 453.419 kb on - strandat 453.464 kb on + strandat 453.465 kb on - strandat 453.465 kb on - strandat 453.471 kb on - strandat 453.478 kb on + strand, within BACOVA_04514at 453.479 kb on - strand, within BACOVA_04514at 453.485 kb on + strand, within BACOVA_04514at 453.490 kb on + strand, within BACOVA_04514at 453.491 kb on - strand, within BACOVA_04514at 453.493 kb on + strand, within BACOVA_04514at 453.535 kb on + strand, within BACOVA_04514at 453.557 kb on - strand, within BACOVA_04514at 453.569 kb on + strand, within BACOVA_04514at 453.592 kb on - strand, within BACOVA_04514at 453.599 kb on - strand, within BACOVA_04514at 453.599 kb on - strand, within BACOVA_04514at 453.599 kb on - strand, within BACOVA_04514at 453.606 kb on + strand, within BACOVA_04514at 453.630 kb on + strand, within BACOVA_04514at 453.652 kb on + strand, within BACOVA_04514at 453.652 kb on + strand, within BACOVA_04514at 453.653 kb on - strand, within BACOVA_04514at 453.661 kb on - strand, within BACOVA_04514at 453.675 kb on + strand, within BACOVA_04514at 453.676 kb on - strand, within BACOVA_04514at 453.692 kb on - strand, within BACOVA_04514at 453.746 kb on + strand, within BACOVA_04514at 453.757 kb on + strand, within BACOVA_04514at 453.757 kb on + strand, within BACOVA_04514at 453.757 kb on + strand, within BACOVA_04514at 453.758 kb on - strand, within BACOVA_04514at 453.758 kb on - strand, within BACOVA_04514at 453.758 kb on - strand, within BACOVA_04514at 453.760 kb on - strand, within BACOVA_04514at 453.767 kb on + strand, within BACOVA_04514at 453.771 kb on - strand, within BACOVA_04514at 453.781 kb on - strand, within BACOVA_04514at 453.939 kb on + strand, within BACOVA_04514at 453.983 kb on + strand, within BACOVA_04514at 453.984 kb on - strand, within BACOVA_04514at 454.029 kb on + strand, within BACOVA_04514

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Per-strain Table

Position Strand Gene LocusTag Fraction Hyaluronic from Streptococcus equi 2.5 mg/ml (C)
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451,098 - -0.4
451,156 + +3.3
451,156 + -1.8
451,296 - BACOVA_04511 0.28 +2.7
451,314 - BACOVA_04511 0.31 -0.3
451,319 + BACOVA_04511 0.32 -2.2
451,319 + BACOVA_04511 0.32 -1.2
451,320 - BACOVA_04511 0.32 +0.2
451,348 - BACOVA_04511 0.38 +3.4
451,353 + BACOVA_04511 0.39 +0.6
451,353 + BACOVA_04511 0.39 +2.2
451,358 + BACOVA_04511 0.40 -0.6
451,360 + BACOVA_04511 0.40 -3.4
451,361 - BACOVA_04511 0.40 -2.0
451,381 + BACOVA_04511 0.44 -0.7
451,381 + BACOVA_04511 0.44 -0.4
451,381 + BACOVA_04511 0.44 -2.1
451,382 - BACOVA_04511 0.44 -0.0
451,394 + BACOVA_04511 0.46 +1.3
451,395 - BACOVA_04511 0.47 -1.5
451,432 + BACOVA_04511 0.54 +0.6
451,432 + BACOVA_04511 0.54 -0.1
451,433 - BACOVA_04511 0.54 +1.8
451,433 - BACOVA_04511 0.54 +1.4
451,439 + BACOVA_04511 0.55 -0.9
451,439 + BACOVA_04511 0.55 +1.4
451,439 + BACOVA_04511 0.55 -0.4
451,440 - BACOVA_04511 0.55 +1.0
451,440 - BACOVA_04511 0.55 +1.6
451,442 + BACOVA_04511 0.55 -0.1
451,443 - BACOVA_04511 0.56 -0.8
451,522 - BACOVA_04511 0.71 -1.2
451,617 + BACOVA_04511 0.89 -1.2
451,642 - -0.8
451,642 - +0.2
451,645 + +0.4
451,685 + -3.2
451,685 + +2.5
451,693 + -3.7
451,709 - +1.7
451,751 - +0.0
451,772 + -1.8
451,772 + -1.0
451,773 - +0.8
451,787 - -1.8
451,821 + BACOVA_04512 0.12 -0.0
451,860 + BACOVA_04512 0.24 +0.3
451,926 - BACOVA_04512 0.44 -3.3
451,942 - BACOVA_04512 0.48 +3.6
451,942 - BACOVA_04512 0.48 -2.4
452,032 + BACOVA_04512 0.76 -0.8
452,033 - BACOVA_04512 0.76 -0.4
452,038 + BACOVA_04512 0.78 -0.4
452,038 + BACOVA_04512 0.78 -0.6
452,039 - BACOVA_04512 0.78 -0.4
452,039 - BACOVA_04512 0.78 -1.0
452,039 - BACOVA_04512 0.78 -0.2
452,076 - BACOVA_04512 0.89 -0.2
452,078 + BACOVA_04512 0.90 -0.4
452,079 - -1.9
452,079 - +1.2
452,105 + +1.2
452,106 - +0.7
452,130 + -2.3
452,130 + -0.7
452,145 - +1.1
452,145 - -1.2
452,164 - -0.3
452,167 + +0.2
452,169 + +2.4
452,215 - BACOVA_04513 0.12 +3.1
452,270 + BACOVA_04513 0.17 +3.1
452,280 - BACOVA_04513 0.18 -3.0
452,292 - BACOVA_04513 0.19 -1.7
452,292 - BACOVA_04513 0.19 -3.2
452,296 - BACOVA_04513 0.19 -1.6
452,296 - BACOVA_04513 0.19 +1.6
452,358 - BACOVA_04513 0.25 -2.1
452,370 + BACOVA_04513 0.26 +1.5
452,391 - BACOVA_04513 0.28 -1.1
452,406 + BACOVA_04513 0.30 +1.9
452,504 + BACOVA_04513 0.39 -2.0
452,505 - BACOVA_04513 0.39 -1.9
452,505 - BACOVA_04513 0.39 -2.2
452,509 + BACOVA_04513 0.39 -0.8
452,509 + BACOVA_04513 0.39 -1.9
452,509 + BACOVA_04513 0.39 +1.6
452,509 + BACOVA_04513 0.39 +1.0
452,586 + BACOVA_04513 0.47 +2.3
452,586 + BACOVA_04513 0.47 -0.8
452,628 - BACOVA_04513 0.51 -2.2
452,640 - BACOVA_04513 0.52 -1.9
452,640 - BACOVA_04513 0.52 +1.1
452,687 + BACOVA_04513 0.56 +0.8
452,687 + BACOVA_04513 0.56 -1.2
452,687 + BACOVA_04513 0.56 -0.4
452,687 + BACOVA_04513 0.56 +1.6
452,688 - BACOVA_04513 0.56 -1.6
452,688 - BACOVA_04513 0.56 +2.6
452,688 - BACOVA_04513 0.56 -0.8
452,703 - BACOVA_04513 0.58 +1.3
452,703 - BACOVA_04513 0.58 -2.0
452,703 - BACOVA_04513 0.58 -1.6
452,706 + BACOVA_04513 0.58 -0.4
452,706 + BACOVA_04513 0.58 -1.6
452,706 + BACOVA_04513 0.58 -0.8
452,771 + BACOVA_04513 0.64 +0.8
452,826 + BACOVA_04513 0.69 -0.8
452,827 - BACOVA_04513 0.69 -1.3
452,827 - BACOVA_04513 0.69 +0.3
452,828 + BACOVA_04513 0.69 -1.8
452,843 - BACOVA_04513 0.71 -2.1
452,843 - BACOVA_04513 0.71 -1.8
452,843 - BACOVA_04513 0.71 -2.4
452,856 + BACOVA_04513 0.72 -0.6
452,895 + BACOVA_04513 0.76 -2.2
452,896 - BACOVA_04513 0.76 +1.1
452,896 - BACOVA_04513 0.76 -1.2
452,984 + BACOVA_04513 0.84 -2.4
452,985 - BACOVA_04513 0.84 -2.4
452,989 + BACOVA_04513 0.85 -1.4
452,990 - BACOVA_04513 0.85 -3.4
453,069 + +0.8
453,072 - +1.3
453,075 - -0.4
453,087 + +0.4
453,087 + -2.4
453,133 - -1.6
453,150 + +2.1
453,154 + +0.6
453,155 - -1.4
453,155 - -1.8
453,167 - +0.6
453,230 + +4.5
453,230 + -0.4
453,231 - +0.5
453,231 - +0.4
453,235 - -0.4
453,293 - -2.4
453,339 + -1.4
453,355 + -0.4
453,355 + +0.3
453,356 - +0.1
453,356 - -1.5
453,376 + -1.9
453,400 + -1.8
453,419 - -2.0
453,464 + -3.4
453,465 - -3.1
453,465 - -0.6
453,471 - +0.8
453,478 + BACOVA_04514 0.10 +1.6
453,479 - BACOVA_04514 0.10 +0.2
453,485 + BACOVA_04514 0.11 -0.5
453,490 + BACOVA_04514 0.11 +0.6
453,491 - BACOVA_04514 0.11 -1.2
453,493 + BACOVA_04514 0.11 -1.0
453,535 + BACOVA_04514 0.15 -1.0
453,557 - BACOVA_04514 0.16 -1.4
453,569 + BACOVA_04514 0.17 +2.2
453,592 - BACOVA_04514 0.19 +1.0
453,599 - BACOVA_04514 0.19 -0.0
453,599 - BACOVA_04514 0.19 +0.6
453,599 - BACOVA_04514 0.19 +2.4
453,606 + BACOVA_04514 0.20 +4.1
453,630 + BACOVA_04514 0.22 +2.2
453,652 + BACOVA_04514 0.23 -0.4
453,652 + BACOVA_04514 0.23 +0.2
453,653 - BACOVA_04514 0.23 -3.6
453,661 - BACOVA_04514 0.24 -3.0
453,675 + BACOVA_04514 0.25 -2.1
453,676 - BACOVA_04514 0.25 -2.2
453,692 - BACOVA_04514 0.26 -0.0
453,746 + BACOVA_04514 0.30 +0.2
453,757 + BACOVA_04514 0.31 +1.8
453,757 + BACOVA_04514 0.31 +1.0
453,757 + BACOVA_04514 0.31 -0.9
453,758 - BACOVA_04514 0.31 -3.0
453,758 - BACOVA_04514 0.31 -2.8
453,758 - BACOVA_04514 0.31 -2.8
453,760 - BACOVA_04514 0.32 -1.6
453,767 + BACOVA_04514 0.32 -1.6
453,771 - BACOVA_04514 0.32 -1.4
453,781 - BACOVA_04514 0.33 +3.0
453,939 + BACOVA_04514 0.45 -1.0
453,983 + BACOVA_04514 0.48 -0.0
453,984 - BACOVA_04514 0.48 -1.9
454,029 + BACOVA_04514 0.52 -0.8

Or see this region's nucleotide sequence