Experiment: Hyaluronic from Streptococcus equi 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_04124 and BACOVA_04125 are separated by 2 nucleotides BACOVA_04125 and BACOVA_04126 are separated by 3 nucleotides BACOVA_04126 and BACOVA_04127 are separated by 31 nucleotides
BACOVA_04124: BACOVA_04124 - oxidoreductase, short chain dehydrogenase/reductase family protein, at 477,509 to 478,396
_04124
BACOVA_04125: BACOVA_04125 - hypothetical protein, at 478,399 to 478,506
_04125
BACOVA_04126: BACOVA_04126 - Alpha-L-rhamnosidase N-terminal domain protein, at 478,510 to 482,370
_04126
BACOVA_04127: BACOVA_04127 - hypothetical protein, at 482,402 to 483,868
_04127
Position (kb) 478
479
480
481
482
483 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 477.517 kb on + strand at 477.518 kb on - strand at 477.551 kb on - strand at 477.617 kb on - strand, within BACOVA_04124 at 477.628 kb on + strand, within BACOVA_04124 at 477.682 kb on - strand, within BACOVA_04124 at 477.825 kb on + strand, within BACOVA_04124 at 477.826 kb on - strand, within BACOVA_04124 at 477.859 kb on - strand, within BACOVA_04124 at 477.883 kb on + strand, within BACOVA_04124 at 477.884 kb on - strand, within BACOVA_04124 at 477.918 kb on - strand, within BACOVA_04124 at 477.931 kb on + strand, within BACOVA_04124 at 477.934 kb on + strand, within BACOVA_04124 at 477.960 kb on - strand, within BACOVA_04124 at 478.012 kb on + strand, within BACOVA_04124 at 478.051 kb on + strand, within BACOVA_04124 at 478.051 kb on + strand, within BACOVA_04124 at 478.052 kb on - strand, within BACOVA_04124 at 478.100 kb on - strand, within BACOVA_04124 at 478.143 kb on - strand, within BACOVA_04124 at 478.143 kb on - strand, within BACOVA_04124 at 478.187 kb on + strand, within BACOVA_04124 at 478.188 kb on - strand, within BACOVA_04124 at 478.226 kb on - strand, within BACOVA_04124 at 478.226 kb on - strand, within BACOVA_04124 at 478.230 kb on - strand, within BACOVA_04124 at 478.316 kb on - strand at 478.316 kb on - strand at 478.360 kb on - strand at 478.383 kb on + strand at 478.384 kb on - strand at 478.384 kb on - strand at 478.388 kb on - strand at 478.431 kb on - strand, within BACOVA_04125 at 478.440 kb on - strand, within BACOVA_04125 at 478.440 kb on - strand, within BACOVA_04125 at 478.444 kb on - strand, within BACOVA_04125 at 478.511 kb on + strand at 478.529 kb on - strand at 478.542 kb on + strand at 478.542 kb on + strand at 478.566 kb on - strand at 478.633 kb on - strand at 478.639 kb on + strand at 478.640 kb on - strand at 478.729 kb on - strand at 478.743 kb on - strand at 478.746 kb on + strand at 478.752 kb on + strand at 478.752 kb on + strand at 478.819 kb on + strand at 478.865 kb on - strand at 478.865 kb on - strand at 478.876 kb on - strand at 478.897 kb on + strand, within BACOVA_04126 at 478.912 kb on - strand, within BACOVA_04126 at 479.035 kb on + strand, within BACOVA_04126 at 479.157 kb on + strand, within BACOVA_04126 at 479.158 kb on - strand, within BACOVA_04126 at 479.176 kb on - strand, within BACOVA_04126 at 479.176 kb on - strand, within BACOVA_04126 at 479.178 kb on + strand, within BACOVA_04126 at 479.178 kb on + strand, within BACOVA_04126 at 479.286 kb on + strand, within BACOVA_04126 at 479.287 kb on - strand, within BACOVA_04126 at 479.358 kb on + strand, within BACOVA_04126 at 479.358 kb on + strand, within BACOVA_04126 at 479.358 kb on + strand, within BACOVA_04126 at 479.358 kb on + strand, within BACOVA_04126 at 479.359 kb on - strand, within BACOVA_04126 at 479.359 kb on - strand, within BACOVA_04126 at 479.388 kb on + strand, within BACOVA_04126 at 479.413 kb on + strand, within BACOVA_04126 at 479.414 kb on - strand, within BACOVA_04126 at 479.493 kb on + strand, within BACOVA_04126 at 479.500 kb on + strand, within BACOVA_04126 at 479.578 kb on + strand, within BACOVA_04126 at 479.669 kb on - strand, within BACOVA_04126 at 479.682 kb on - strand, within BACOVA_04126 at 479.726 kb on - strand, within BACOVA_04126 at 479.800 kb on + strand, within BACOVA_04126 at 479.810 kb on + strand, within BACOVA_04126 at 479.878 kb on - strand, within BACOVA_04126 at 479.953 kb on - strand, within BACOVA_04126 at 480.010 kb on + strand, within BACOVA_04126 at 480.021 kb on + strand, within BACOVA_04126 at 480.022 kb on - strand, within BACOVA_04126 at 480.045 kb on + strand, within BACOVA_04126 at 480.045 kb on + strand, within BACOVA_04126 at 480.046 kb on - strand, within BACOVA_04126 at 480.046 kb on - strand, within BACOVA_04126 at 480.046 kb on - strand, within BACOVA_04126 at 480.048 kb on - strand, within BACOVA_04126 at 480.062 kb on + strand, within BACOVA_04126 at 480.082 kb on + strand, within BACOVA_04126 at 480.083 kb on - strand, within BACOVA_04126 at 480.086 kb on + strand, within BACOVA_04126 at 480.087 kb on - strand, within BACOVA_04126 at 480.091 kb on + strand, within BACOVA_04126 at 480.127 kb on + strand, within BACOVA_04126 at 480.157 kb on + strand, within BACOVA_04126 at 480.157 kb on + strand, within BACOVA_04126 at 480.158 kb on - strand, within BACOVA_04126 at 480.158 kb on - strand, within BACOVA_04126 at 480.160 kb on - strand, within BACOVA_04126 at 480.160 kb on - strand, within BACOVA_04126 at 480.177 kb on + strand, within BACOVA_04126 at 480.177 kb on + strand, within BACOVA_04126 at 480.178 kb on - strand, within BACOVA_04126 at 480.178 kb on - strand, within BACOVA_04126 at 480.202 kb on - strand, within BACOVA_04126 at 480.218 kb on + strand, within BACOVA_04126 at 480.218 kb on + strand, within BACOVA_04126 at 480.218 kb on + strand, within BACOVA_04126 at 480.256 kb on - strand, within BACOVA_04126 at 480.277 kb on - strand, within BACOVA_04126 at 480.288 kb on + strand, within BACOVA_04126 at 480.288 kb on + strand, within BACOVA_04126 at 480.291 kb on + strand, within BACOVA_04126 at 480.301 kb on + strand, within BACOVA_04126 at 480.302 kb on - strand, within BACOVA_04126 at 480.302 kb on - strand, within BACOVA_04126 at 480.306 kb on + strand, within BACOVA_04126 at 480.306 kb on + strand, within BACOVA_04126 at 480.306 kb on + strand, within BACOVA_04126 at 480.338 kb on - strand, within BACOVA_04126 at 480.338 kb on - strand, within BACOVA_04126 at 480.451 kb on + strand, within BACOVA_04126 at 480.452 kb on - strand, within BACOVA_04126 at 480.452 kb on - strand, within BACOVA_04126 at 480.452 kb on - strand, within BACOVA_04126 at 480.511 kb on - strand, within BACOVA_04126 at 480.557 kb on + strand, within BACOVA_04126 at 480.576 kb on + strand, within BACOVA_04126 at 480.577 kb on - strand, within BACOVA_04126 at 480.592 kb on - strand, within BACOVA_04126 at 480.592 kb on - strand, within BACOVA_04126 at 480.596 kb on + strand, within BACOVA_04126 at 480.596 kb on + strand, within BACOVA_04126 at 480.635 kb on + strand, within BACOVA_04126 at 480.763 kb on - strand, within BACOVA_04126 at 480.813 kb on - strand, within BACOVA_04126 at 480.813 kb on - strand, within BACOVA_04126 at 480.821 kb on + strand, within BACOVA_04126 at 480.821 kb on + strand, within BACOVA_04126 at 480.861 kb on + strand, within BACOVA_04126 at 480.924 kb on - strand, within BACOVA_04126 at 480.999 kb on + strand, within BACOVA_04126 at 481.019 kb on - strand, within BACOVA_04126 at 481.058 kb on + strand, within BACOVA_04126 at 481.073 kb on - strand, within BACOVA_04126 at 481.077 kb on - strand, within BACOVA_04126 at 481.096 kb on - strand, within BACOVA_04126 at 481.096 kb on - strand, within BACOVA_04126 at 481.096 kb on - strand, within BACOVA_04126 at 481.113 kb on + strand, within BACOVA_04126 at 481.114 kb on - strand, within BACOVA_04126 at 481.145 kb on + strand, within BACOVA_04126 at 481.145 kb on + strand, within BACOVA_04126 at 481.146 kb on - strand, within BACOVA_04126 at 481.146 kb on - strand, within BACOVA_04126 at 481.147 kb on + strand, within BACOVA_04126 at 481.147 kb on + strand, within BACOVA_04126 at 481.147 kb on + strand, within BACOVA_04126 at 481.148 kb on - strand, within BACOVA_04126 at 481.148 kb on - strand, within BACOVA_04126 at 481.301 kb on + strand, within BACOVA_04126 at 481.301 kb on + strand, within BACOVA_04126 at 481.396 kb on - strand, within BACOVA_04126 at 481.433 kb on + strand, within BACOVA_04126 at 481.475 kb on + strand, within BACOVA_04126 at 481.491 kb on - strand, within BACOVA_04126 at 481.497 kb on + strand, within BACOVA_04126 at 481.497 kb on + strand, within BACOVA_04126 at 481.516 kb on + strand, within BACOVA_04126 at 481.521 kb on + strand, within BACOVA_04126 at 481.522 kb on - strand, within BACOVA_04126 at 481.545 kb on + strand, within BACOVA_04126 at 481.574 kb on + strand, within BACOVA_04126 at 481.574 kb on + strand, within BACOVA_04126 at 481.622 kb on - strand, within BACOVA_04126 at 481.627 kb on - strand, within BACOVA_04126 at 481.635 kb on + strand, within BACOVA_04126 at 481.654 kb on - strand, within BACOVA_04126 at 481.656 kb on - strand, within BACOVA_04126 at 481.678 kb on + strand, within BACOVA_04126 at 481.713 kb on + strand, within BACOVA_04126 at 481.721 kb on + strand, within BACOVA_04126 at 481.721 kb on + strand, within BACOVA_04126 at 481.831 kb on - strand, within BACOVA_04126 at 481.835 kb on - strand, within BACOVA_04126 at 481.835 kb on - strand, within BACOVA_04126 at 482.035 kb on + strand at 482.035 kb on + strand at 482.036 kb on - strand at 482.110 kb on - strand at 482.136 kb on + strand at 482.137 kb on - strand at 482.159 kb on - strand at 482.189 kb on + strand at 482.200 kb on + strand at 482.260 kb on - strand at 482.299 kb on + strand at 482.300 kb on - strand at 482.305 kb on + strand at 482.305 kb on + strand at 482.306 kb on - strand at 482.315 kb on + strand at 482.317 kb on + strand at 482.318 kb on - strand at 482.356 kb on + strand at 482.370 kb on + strand at 482.371 kb on - strand at 482.407 kb on + strand at 482.453 kb on + strand at 482.456 kb on - strand at 482.457 kb on + strand at 482.458 kb on - strand at 482.465 kb on - strand at 482.468 kb on - strand at 482.560 kb on - strand, within BACOVA_04127 at 482.569 kb on + strand, within BACOVA_04127 at 482.652 kb on + strand, within BACOVA_04127 at 482.659 kb on - strand, within BACOVA_04127 at 482.659 kb on - strand, within BACOVA_04127 at 482.826 kb on + strand, within BACOVA_04127 at 482.827 kb on - strand, within BACOVA_04127 at 482.847 kb on + strand, within BACOVA_04127 at 482.848 kb on - strand, within BACOVA_04127 at 482.872 kb on + strand, within BACOVA_04127 at 482.899 kb on - strand, within BACOVA_04127 at 482.902 kb on + strand, within BACOVA_04127 at 483.331 kb on + strand, within BACOVA_04127 at 483.346 kb on + strand, within BACOVA_04127 at 483.347 kb on - strand, within BACOVA_04127 at 483.348 kb on + strand, within BACOVA_04127
Per-strain Table
Position Strand Gene LocusTag Fraction Hyaluronic from Streptococcus equi 2.5 mg/ml (C) remove 477,517 + -1.1 477,518 - -1.0 477,551 - +1.1 477,617 - BACOVA_04124 0.12 +0.9 477,628 + BACOVA_04124 0.13 -1.1 477,682 - BACOVA_04124 0.19 -0.1 477,825 + BACOVA_04124 0.36 -1.2 477,826 - BACOVA_04124 0.36 +1.3 477,859 - BACOVA_04124 0.39 -0.5 477,883 + BACOVA_04124 0.42 +1.2 477,884 - BACOVA_04124 0.42 -2.0 477,918 - BACOVA_04124 0.46 +0.2 477,931 + BACOVA_04124 0.48 +2.1 477,934 + BACOVA_04124 0.48 -0.3 477,960 - BACOVA_04124 0.51 -1.5 478,012 + BACOVA_04124 0.57 +0.2 478,051 + BACOVA_04124 0.61 +1.2 478,051 + BACOVA_04124 0.61 -1.1 478,052 - BACOVA_04124 0.61 -1.1 478,100 - BACOVA_04124 0.67 -0.1 478,143 - BACOVA_04124 0.71 +2.3 478,143 - BACOVA_04124 0.71 +1.8 478,187 + BACOVA_04124 0.76 -0.5 478,188 - BACOVA_04124 0.76 -0.1 478,226 - BACOVA_04124 0.81 -0.1 478,226 - BACOVA_04124 0.81 -1.0 478,230 - BACOVA_04124 0.81 -1.9 478,316 - +2.7 478,316 - -1.5 478,360 - +1.3 478,383 + +1.1 478,384 - +1.5 478,384 - -1.3 478,388 - +2.2 478,431 - BACOVA_04125 0.30 +0.5 478,440 - BACOVA_04125 0.38 +2.7 478,440 - BACOVA_04125 0.38 +0.2 478,444 - BACOVA_04125 0.42 -3.4 478,511 + -1.7 478,529 - -1.5 478,542 + -1.3 478,542 + +0.5 478,566 - +0.9 478,633 - -2.3 478,639 + -0.1 478,640 - +2.4 478,729 - +0.1 478,743 - +0.5 478,746 + +0.7 478,752 + -2.0 478,752 + -1.8 478,819 + +0.7 478,865 - -2.0 478,865 - +0.4 478,876 - +0.4 478,897 + BACOVA_04126 0.10 +1.8 478,912 - BACOVA_04126 0.10 +2.0 479,035 + BACOVA_04126 0.14 +0.5 479,157 + BACOVA_04126 0.17 -2.1 479,158 - BACOVA_04126 0.17 -1.3 479,176 - BACOVA_04126 0.17 +0.7 479,176 - BACOVA_04126 0.17 +0.5 479,178 + BACOVA_04126 0.17 -1.0 479,178 + BACOVA_04126 0.17 -1.5 479,286 + BACOVA_04126 0.20 -2.3 479,287 - BACOVA_04126 0.20 +3.1 479,358 + BACOVA_04126 0.22 -2.0 479,358 + BACOVA_04126 0.22 -0.5 479,358 + BACOVA_04126 0.22 +1.5 479,358 + BACOVA_04126 0.22 +2.1 479,359 - BACOVA_04126 0.22 +1.0 479,359 - BACOVA_04126 0.22 +0.2 479,388 + BACOVA_04126 0.23 -2.3 479,413 + BACOVA_04126 0.23 +0.6 479,414 - BACOVA_04126 0.23 -1.4 479,493 + BACOVA_04126 0.25 +1.1 479,500 + BACOVA_04126 0.26 +0.5 479,578 + BACOVA_04126 0.28 +1.6 479,669 - BACOVA_04126 0.30 +3.4 479,682 - BACOVA_04126 0.30 -0.5 479,726 - BACOVA_04126 0.31 +1.0 479,800 + BACOVA_04126 0.33 -1.1 479,810 + BACOVA_04126 0.34 -1.3 479,878 - BACOVA_04126 0.35 -0.7 479,953 - BACOVA_04126 0.37 +0.5 480,010 + BACOVA_04126 0.39 -2.6 480,021 + BACOVA_04126 0.39 -1.4 480,022 - BACOVA_04126 0.39 -1.1 480,045 + BACOVA_04126 0.40 -0.1 480,045 + BACOVA_04126 0.40 -2.5 480,046 - BACOVA_04126 0.40 -1.0 480,046 - BACOVA_04126 0.40 -0.1 480,046 - BACOVA_04126 0.40 -1.1 480,048 - BACOVA_04126 0.40 -0.8 480,062 + BACOVA_04126 0.40 +0.2 480,082 + BACOVA_04126 0.41 -0.5 480,083 - BACOVA_04126 0.41 +0.5 480,086 + BACOVA_04126 0.41 +3.2 480,087 - BACOVA_04126 0.41 -0.7 480,091 + BACOVA_04126 0.41 +1.0 480,127 + BACOVA_04126 0.42 +1.8 480,157 + BACOVA_04126 0.43 -3.0 480,157 + BACOVA_04126 0.43 -1.1 480,158 - BACOVA_04126 0.43 -0.6 480,158 - BACOVA_04126 0.43 +0.5 480,160 - BACOVA_04126 0.43 +0.5 480,160 - BACOVA_04126 0.43 +0.2 480,177 + BACOVA_04126 0.43 -0.9 480,177 + BACOVA_04126 0.43 -1.8 480,178 - BACOVA_04126 0.43 -0.1 480,178 - BACOVA_04126 0.43 +1.1 480,202 - BACOVA_04126 0.44 -0.8 480,218 + BACOVA_04126 0.44 +0.8 480,218 + BACOVA_04126 0.44 -1.5 480,218 + BACOVA_04126 0.44 +0.6 480,256 - BACOVA_04126 0.45 +0.9 480,277 - BACOVA_04126 0.46 -1.3 480,288 + BACOVA_04126 0.46 -1.0 480,288 + BACOVA_04126 0.46 +0.6 480,291 + BACOVA_04126 0.46 +1.7 480,301 + BACOVA_04126 0.46 +1.1 480,302 - BACOVA_04126 0.46 -0.8 480,302 - BACOVA_04126 0.46 +1.5 480,306 + BACOVA_04126 0.47 +1.5 480,306 + BACOVA_04126 0.47 +3.4 480,306 + BACOVA_04126 0.47 -0.1 480,338 - BACOVA_04126 0.47 -0.8 480,338 - BACOVA_04126 0.47 +1.1 480,451 + BACOVA_04126 0.50 +2.1 480,452 - BACOVA_04126 0.50 -1.3 480,452 - BACOVA_04126 0.50 +0.5 480,452 - BACOVA_04126 0.50 -1.9 480,511 - BACOVA_04126 0.52 +1.1 480,557 + BACOVA_04126 0.53 -1.1 480,576 + BACOVA_04126 0.54 -1.5 480,577 - BACOVA_04126 0.54 +2.8 480,592 - BACOVA_04126 0.54 -0.5 480,592 - BACOVA_04126 0.54 +0.5 480,596 + BACOVA_04126 0.54 +1.5 480,596 + BACOVA_04126 0.54 -1.8 480,635 + BACOVA_04126 0.55 +0.5 480,763 - BACOVA_04126 0.58 +0.1 480,813 - BACOVA_04126 0.60 +1.1 480,813 - BACOVA_04126 0.60 -1.5 480,821 + BACOVA_04126 0.60 +1.5 480,821 + BACOVA_04126 0.60 -1.7 480,861 + BACOVA_04126 0.61 +3.1 480,924 - BACOVA_04126 0.63 -2.1 480,999 + BACOVA_04126 0.64 -0.4 481,019 - BACOVA_04126 0.65 -1.1 481,058 + BACOVA_04126 0.66 +0.8 481,073 - BACOVA_04126 0.66 -0.5 481,077 - BACOVA_04126 0.66 -0.4 481,096 - BACOVA_04126 0.67 -1.0 481,096 - BACOVA_04126 0.67 +0.9 481,096 - BACOVA_04126 0.67 -0.1 481,113 + BACOVA_04126 0.67 +0.1 481,114 - BACOVA_04126 0.67 -1.2 481,145 + BACOVA_04126 0.68 -1.6 481,145 + BACOVA_04126 0.68 -0.6 481,146 - BACOVA_04126 0.68 -0.6 481,146 - BACOVA_04126 0.68 -1.5 481,147 + BACOVA_04126 0.68 -1.7 481,147 + BACOVA_04126 0.68 +1.5 481,147 + BACOVA_04126 0.68 -0.5 481,148 - BACOVA_04126 0.68 +0.7 481,148 - BACOVA_04126 0.68 -0.1 481,301 + BACOVA_04126 0.72 +0.5 481,301 + BACOVA_04126 0.72 +0.8 481,396 - BACOVA_04126 0.75 +1.2 481,433 + BACOVA_04126 0.76 -0.5 481,475 + BACOVA_04126 0.77 -2.3 481,491 - BACOVA_04126 0.77 +0.0 481,497 + BACOVA_04126 0.77 +3.1 481,497 + BACOVA_04126 0.77 +0.5 481,516 + BACOVA_04126 0.78 -1.1 481,521 + BACOVA_04126 0.78 -0.2 481,522 - BACOVA_04126 0.78 -1.0 481,545 + BACOVA_04126 0.79 -1.1 481,574 + BACOVA_04126 0.79 -2.7 481,574 + BACOVA_04126 0.79 +0.4 481,622 - BACOVA_04126 0.81 -1.5 481,627 - BACOVA_04126 0.81 -1.6 481,635 + BACOVA_04126 0.81 -0.3 481,654 - BACOVA_04126 0.81 -0.8 481,656 - BACOVA_04126 0.81 +2.1 481,678 + BACOVA_04126 0.82 -0.3 481,713 + BACOVA_04126 0.83 -0.8 481,721 + BACOVA_04126 0.83 +0.2 481,721 + BACOVA_04126 0.83 -0.1 481,831 - BACOVA_04126 0.86 -0.2 481,835 - BACOVA_04126 0.86 -2.1 481,835 - BACOVA_04126 0.86 +0.5 482,035 + -0.5 482,035 + -0.7 482,036 - -1.1 482,110 - -0.8 482,136 + -2.1 482,137 - -0.1 482,159 - -1.7 482,189 + -2.0 482,200 + -0.2 482,260 - -0.0 482,299 + +0.5 482,300 - -1.1 482,305 + -0.8 482,305 + -0.1 482,306 - -2.2 482,315 + +1.1 482,317 + +1.1 482,318 - -1.4 482,356 + -1.1 482,370 + -2.1 482,371 - -1.5 482,407 + +0.5 482,453 + -1.3 482,456 - -1.3 482,457 + +0.1 482,458 - -1.8 482,465 - +1.2 482,468 - +1.5 482,560 - BACOVA_04127 0.11 -1.8 482,569 + BACOVA_04127 0.11 -1.1 482,652 + BACOVA_04127 0.17 +3.4 482,659 - BACOVA_04127 0.18 -0.8 482,659 - BACOVA_04127 0.18 -1.3 482,826 + BACOVA_04127 0.29 -1.6 482,827 - BACOVA_04127 0.29 -1.1 482,847 + BACOVA_04127 0.30 -2.3 482,848 - BACOVA_04127 0.30 -0.8 482,872 + BACOVA_04127 0.32 +2.1 482,899 - BACOVA_04127 0.34 +0.2 482,902 + BACOVA_04127 0.34 -1.1 483,331 + BACOVA_04127 0.63 -2.0 483,346 + BACOVA_04127 0.64 +2.7 483,347 - BACOVA_04127 0.64 -1.8 483,348 + BACOVA_04127 0.64 +0.9
Or see this region's nucleotide sequence