Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_03848

Experiment: Hyaluronic from Streptococcus equi 2.5 mg/ml (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_03847 and BACOVA_03848 are separated by 106 nucleotidesBACOVA_03848 and BACOVA_03849 are separated by 177 nucleotides BACOVA_03847: BACOVA_03847 - Na+/H+ antiporter family protein, at 196,775 to 198,076 _03847 BACOVA_03848: BACOVA_03848 - ribosomal protein S16, at 198,183 to 198,737 _03848 BACOVA_03849: BACOVA_03849 - transcriptional regulator, GntR family, at 198,915 to 199,910 _03849 Position (kb) 198 199Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 197.238 kb on + strand, within BACOVA_03847at 197.256 kb on + strand, within BACOVA_03847at 197.257 kb on - strand, within BACOVA_03847at 197.266 kb on - strand, within BACOVA_03847at 197.269 kb on - strand, within BACOVA_03847at 197.347 kb on - strand, within BACOVA_03847at 197.375 kb on - strand, within BACOVA_03847at 197.415 kb on - strand, within BACOVA_03847at 197.480 kb on - strand, within BACOVA_03847at 197.481 kb on + strand, within BACOVA_03847at 197.487 kb on - strand, within BACOVA_03847at 197.491 kb on - strand, within BACOVA_03847at 197.497 kb on - strand, within BACOVA_03847at 197.499 kb on + strand, within BACOVA_03847at 197.499 kb on + strand, within BACOVA_03847at 197.500 kb on - strand, within BACOVA_03847at 197.541 kb on + strand, within BACOVA_03847at 197.542 kb on - strand, within BACOVA_03847at 197.545 kb on - strand, within BACOVA_03847at 197.548 kb on + strand, within BACOVA_03847at 197.548 kb on + strand, within BACOVA_03847at 197.551 kb on - strand, within BACOVA_03847at 197.650 kb on + strand, within BACOVA_03847at 197.650 kb on + strand, within BACOVA_03847at 197.650 kb on + strand, within BACOVA_03847at 197.651 kb on - strand, within BACOVA_03847at 197.651 kb on - strand, within BACOVA_03847at 197.651 kb on - strand, within BACOVA_03847at 197.662 kb on - strand, within BACOVA_03847at 197.786 kb on - strand, within BACOVA_03847at 197.796 kb on + strand, within BACOVA_03847at 197.801 kb on - strand, within BACOVA_03847at 197.801 kb on - strand, within BACOVA_03847at 197.826 kb on + strand, within BACOVA_03847at 197.826 kb on + strand, within BACOVA_03847at 197.827 kb on - strand, within BACOVA_03847at 197.866 kb on - strand, within BACOVA_03847at 197.893 kb on + strand, within BACOVA_03847at 197.903 kb on - strand, within BACOVA_03847at 197.919 kb on + strand, within BACOVA_03847at 197.974 kb on + strandat 198.017 kb on - strandat 198.774 kb on + strandat 199.060 kb on - strand, within BACOVA_03849at 199.067 kb on - strand, within BACOVA_03849at 199.102 kb on + strand, within BACOVA_03849at 199.103 kb on - strand, within BACOVA_03849at 199.143 kb on + strand, within BACOVA_03849at 199.146 kb on + strand, within BACOVA_03849at 199.175 kb on - strand, within BACOVA_03849at 199.191 kb on + strand, within BACOVA_03849at 199.191 kb on + strand, within BACOVA_03849at 199.193 kb on + strand, within BACOVA_03849at 199.193 kb on + strand, within BACOVA_03849at 199.193 kb on + strand, within BACOVA_03849at 199.213 kb on + strand, within BACOVA_03849at 199.213 kb on + strand, within BACOVA_03849at 199.214 kb on - strand, within BACOVA_03849at 199.214 kb on - strand, within BACOVA_03849at 199.214 kb on - strand, within BACOVA_03849at 199.216 kb on - strand, within BACOVA_03849at 199.218 kb on - strand, within BACOVA_03849at 199.249 kb on - strand, within BACOVA_03849at 199.250 kb on + strand, within BACOVA_03849at 199.251 kb on - strand, within BACOVA_03849at 199.255 kb on + strand, within BACOVA_03849at 199.255 kb on + strand, within BACOVA_03849at 199.262 kb on - strand, within BACOVA_03849at 199.265 kb on - strand, within BACOVA_03849at 199.276 kb on - strand, within BACOVA_03849at 199.324 kb on - strand, within BACOVA_03849at 199.333 kb on - strand, within BACOVA_03849at 199.333 kb on - strand, within BACOVA_03849at 199.333 kb on - strand, within BACOVA_03849at 199.399 kb on + strand, within BACOVA_03849at 199.444 kb on - strand, within BACOVA_03849at 199.445 kb on + strand, within BACOVA_03849at 199.446 kb on - strand, within BACOVA_03849at 199.513 kb on - strand, within BACOVA_03849at 199.565 kb on + strand, within BACOVA_03849at 199.566 kb on - strand, within BACOVA_03849at 199.616 kb on - strand, within BACOVA_03849at 199.626 kb on - strand, within BACOVA_03849at 199.642 kb on + strand, within BACOVA_03849at 199.659 kb on + strand, within BACOVA_03849at 199.659 kb on + strand, within BACOVA_03849at 199.660 kb on - strand, within BACOVA_03849at 199.660 kb on - strand, within BACOVA_03849at 199.660 kb on - strand, within BACOVA_03849at 199.660 kb on - strand, within BACOVA_03849at 199.660 kb on - strand, within BACOVA_03849at 199.660 kb on - strand, within BACOVA_03849

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Per-strain Table

Position Strand Gene LocusTag Fraction Hyaluronic from Streptococcus equi 2.5 mg/ml (C)
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197,238 + BACOVA_03847 0.36 -2.8
197,256 + BACOVA_03847 0.37 -4.4
197,257 - BACOVA_03847 0.37 +1.5
197,266 - BACOVA_03847 0.38 -0.5
197,269 - BACOVA_03847 0.38 -3.5
197,347 - BACOVA_03847 0.44 -0.5
197,375 - BACOVA_03847 0.46 -3.4
197,415 - BACOVA_03847 0.49 -1.9
197,480 - BACOVA_03847 0.54 -3.7
197,481 + BACOVA_03847 0.54 -2.2
197,487 - BACOVA_03847 0.55 -1.5
197,491 - BACOVA_03847 0.55 -3.9
197,497 - BACOVA_03847 0.55 -2.7
197,499 + BACOVA_03847 0.56 +0.5
197,499 + BACOVA_03847 0.56 -2.7
197,500 - BACOVA_03847 0.56 -0.8
197,541 + BACOVA_03847 0.59 -2.2
197,542 - BACOVA_03847 0.59 +0.5
197,545 - BACOVA_03847 0.59 -3.3
197,548 + BACOVA_03847 0.59 -2.3
197,548 + BACOVA_03847 0.59 -1.7
197,551 - BACOVA_03847 0.60 -3.6
197,650 + BACOVA_03847 0.67 -1.5
197,650 + BACOVA_03847 0.67 -2.3
197,650 + BACOVA_03847 0.67 -1.2
197,651 - BACOVA_03847 0.67 -0.9
197,651 - BACOVA_03847 0.67 -2.3
197,651 - BACOVA_03847 0.67 -1.8
197,662 - BACOVA_03847 0.68 -0.1
197,786 - BACOVA_03847 0.78 -2.8
197,796 + BACOVA_03847 0.78 -0.1
197,801 - BACOVA_03847 0.79 -1.1
197,801 - BACOVA_03847 0.79 -2.3
197,826 + BACOVA_03847 0.81 -2.7
197,826 + BACOVA_03847 0.81 -2.2
197,827 - BACOVA_03847 0.81 -2.1
197,866 - BACOVA_03847 0.84 -3.2
197,893 + BACOVA_03847 0.86 -0.5
197,903 - BACOVA_03847 0.87 -4.1
197,919 + BACOVA_03847 0.88 -3.1
197,974 + -4.1
198,017 - -2.5
198,774 + -0.1
199,060 - BACOVA_03849 0.15 +0.5
199,067 - BACOVA_03849 0.15 -1.2
199,102 + BACOVA_03849 0.19 -0.1
199,103 - BACOVA_03849 0.19 -1.4
199,143 + BACOVA_03849 0.23 +0.5
199,146 + BACOVA_03849 0.23 -1.8
199,175 - BACOVA_03849 0.26 -0.9
199,191 + BACOVA_03849 0.28 +0.6
199,191 + BACOVA_03849 0.28 +2.6
199,193 + BACOVA_03849 0.28 -2.1
199,193 + BACOVA_03849 0.28 -0.3
199,193 + BACOVA_03849 0.28 -0.8
199,213 + BACOVA_03849 0.30 -0.5
199,213 + BACOVA_03849 0.30 -1.0
199,214 - BACOVA_03849 0.30 +1.0
199,214 - BACOVA_03849 0.30 +1.2
199,214 - BACOVA_03849 0.30 +2.6
199,216 - BACOVA_03849 0.30 -1.5
199,218 - BACOVA_03849 0.30 +0.5
199,249 - BACOVA_03849 0.34 -0.8
199,250 + BACOVA_03849 0.34 +2.8
199,251 - BACOVA_03849 0.34 -1.2
199,255 + BACOVA_03849 0.34 -0.1
199,255 + BACOVA_03849 0.34 +0.9
199,262 - BACOVA_03849 0.35 -0.8
199,265 - BACOVA_03849 0.35 +1.1
199,276 - BACOVA_03849 0.36 -4.0
199,324 - BACOVA_03849 0.41 -0.8
199,333 - BACOVA_03849 0.42 -0.5
199,333 - BACOVA_03849 0.42 -1.1
199,333 - BACOVA_03849 0.42 +0.9
199,399 + BACOVA_03849 0.49 -2.7
199,444 - BACOVA_03849 0.53 -1.8
199,445 + BACOVA_03849 0.53 +0.1
199,446 - BACOVA_03849 0.53 +1.0
199,513 - BACOVA_03849 0.60 +1.6
199,565 + BACOVA_03849 0.65 -0.3
199,566 - BACOVA_03849 0.65 -1.8
199,616 - BACOVA_03849 0.70 +0.5
199,626 - BACOVA_03849 0.71 -0.8
199,642 + BACOVA_03849 0.73 +1.8
199,659 + BACOVA_03849 0.75 -1.7
199,659 + BACOVA_03849 0.75 +0.5
199,660 - BACOVA_03849 0.75 -0.3
199,660 - BACOVA_03849 0.75 +0.5
199,660 - BACOVA_03849 0.75 -0.4
199,660 - BACOVA_03849 0.75 +0.4
199,660 - BACOVA_03849 0.75 -0.5
199,660 - BACOVA_03849 0.75 -1.8

Or see this region's nucleotide sequence