Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_03473

Experiment: Hyaluronic from Streptococcus equi 2.5 mg/ml (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_03471 and BACOVA_03472 overlap by 1 nucleotidesBACOVA_03472 and BACOVA_03473 overlap by 20 nucleotidesBACOVA_03473 and BACOVA_03474 are separated by 182 nucleotides BACOVA_03471: BACOVA_03471 - universal stress family protein, at 218,284 to 220,419 _03471 BACOVA_03472: BACOVA_03472 - ThiF family protein, at 220,419 to 221,135 _03472 BACOVA_03473: BACOVA_03473 - ABC transporter, ATP-binding protein, at 221,116 to 221,799 _03473 BACOVA_03474: BACOVA_03474 - hypothetical protein, at 221,982 to 222,899 _03474 Position (kb) 221 222Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 220.187 kb on + strand, within BACOVA_03471at 220.187 kb on + strand, within BACOVA_03471at 220.197 kb on + strand, within BACOVA_03471at 220.225 kb on + strandat 220.225 kb on + strandat 220.281 kb on + strandat 220.289 kb on + strandat 220.372 kb on + strandat 220.398 kb on + strandat 220.417 kb on + strandat 220.579 kb on + strand, within BACOVA_03472at 220.601 kb on + strand, within BACOVA_03472at 220.601 kb on + strand, within BACOVA_03472at 220.604 kb on + strand, within BACOVA_03472at 220.607 kb on + strand, within BACOVA_03472at 220.679 kb on + strand, within BACOVA_03472at 220.679 kb on + strand, within BACOVA_03472at 220.687 kb on + strand, within BACOVA_03472at 220.687 kb on + strand, within BACOVA_03472at 220.767 kb on + strand, within BACOVA_03472at 220.841 kb on + strand, within BACOVA_03472at 220.886 kb on + strand, within BACOVA_03472at 221.079 kb on + strandat 221.079 kb on + strandat 221.079 kb on + strandat 221.081 kb on + strandat 221.115 kb on + strandat 221.133 kb on + strandat 221.142 kb on + strandat 221.771 kb on + strandat 221.839 kb on - strandat 221.868 kb on + strandat 221.873 kb on - strandat 221.877 kb on - strandat 221.877 kb on - strandat 221.911 kb on + strandat 221.911 kb on + strandat 221.912 kb on - strandat 221.915 kb on - strandat 221.915 kb on - strandat 221.987 kb on + strandat 221.990 kb on - strandat 222.006 kb on + strandat 222.024 kb on - strandat 222.040 kb on + strandat 222.088 kb on + strand, within BACOVA_03474at 222.088 kb on + strand, within BACOVA_03474at 222.093 kb on + strand, within BACOVA_03474at 222.093 kb on + strand, within BACOVA_03474at 222.093 kb on + strand, within BACOVA_03474at 222.093 kb on + strand, within BACOVA_03474at 222.094 kb on - strand, within BACOVA_03474at 222.098 kb on + strand, within BACOVA_03474at 222.099 kb on - strand, within BACOVA_03474at 222.116 kb on - strand, within BACOVA_03474at 222.120 kb on + strand, within BACOVA_03474at 222.121 kb on - strand, within BACOVA_03474at 222.124 kb on + strand, within BACOVA_03474at 222.125 kb on - strand, within BACOVA_03474at 222.158 kb on + strand, within BACOVA_03474at 222.158 kb on + strand, within BACOVA_03474at 222.225 kb on + strand, within BACOVA_03474at 222.225 kb on + strand, within BACOVA_03474at 222.249 kb on + strand, within BACOVA_03474at 222.365 kb on + strand, within BACOVA_03474at 222.365 kb on + strand, within BACOVA_03474at 222.365 kb on + strand, within BACOVA_03474at 222.402 kb on + strand, within BACOVA_03474at 222.403 kb on - strand, within BACOVA_03474at 222.427 kb on - strand, within BACOVA_03474at 222.437 kb on + strand, within BACOVA_03474at 222.438 kb on - strand, within BACOVA_03474at 222.438 kb on - strand, within BACOVA_03474at 222.461 kb on + strand, within BACOVA_03474at 222.472 kb on + strand, within BACOVA_03474at 222.472 kb on + strand, within BACOVA_03474at 222.473 kb on - strand, within BACOVA_03474at 222.473 kb on - strand, within BACOVA_03474at 222.473 kb on - strand, within BACOVA_03474at 222.512 kb on - strand, within BACOVA_03474at 222.512 kb on - strand, within BACOVA_03474at 222.512 kb on - strand, within BACOVA_03474at 222.513 kb on + strand, within BACOVA_03474at 222.545 kb on + strand, within BACOVA_03474at 222.555 kb on - strand, within BACOVA_03474at 222.617 kb on + strand, within BACOVA_03474at 222.617 kb on + strand, within BACOVA_03474at 222.728 kb on + strand, within BACOVA_03474at 222.739 kb on + strand, within BACOVA_03474

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Per-strain Table

Position Strand Gene LocusTag Fraction Hyaluronic from Streptococcus equi 2.5 mg/ml (C)
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220,187 + BACOVA_03471 0.89 -2.1
220,187 + BACOVA_03471 0.89 -0.9
220,197 + BACOVA_03471 0.90 -0.6
220,225 + -0.1
220,225 + -1.1
220,281 + -0.7
220,289 + -2.0
220,372 + -0.8
220,398 + +0.0
220,417 + +0.9
220,579 + BACOVA_03472 0.22 -0.8
220,601 + BACOVA_03472 0.25 -2.9
220,601 + BACOVA_03472 0.25 +0.2
220,604 + BACOVA_03472 0.26 -0.7
220,607 + BACOVA_03472 0.26 -0.5
220,679 + BACOVA_03472 0.36 -0.5
220,679 + BACOVA_03472 0.36 +3.1
220,687 + BACOVA_03472 0.37 -1.7
220,687 + BACOVA_03472 0.37 -0.5
220,767 + BACOVA_03472 0.49 -3.4
220,841 + BACOVA_03472 0.59 -2.2
220,886 + BACOVA_03472 0.65 -1.2
221,079 + -1.8
221,079 + -0.6
221,079 + -1.4
221,081 + +0.6
221,115 + -1.5
221,133 + +0.5
221,142 + -2.5
221,771 + +0.5
221,839 - -2.1
221,868 + -0.2
221,873 - -1.3
221,877 - +2.9
221,877 - +0.5
221,911 + +0.9
221,911 + +3.8
221,912 - +1.1
221,915 - -2.4
221,915 - +2.5
221,987 + -1.5
221,990 - -1.3
222,006 + +1.5
222,024 - -2.0
222,040 + -0.8
222,088 + BACOVA_03474 0.12 +1.8
222,088 + BACOVA_03474 0.12 -1.4
222,093 + BACOVA_03474 0.12 -1.2
222,093 + BACOVA_03474 0.12 -1.0
222,093 + BACOVA_03474 0.12 -0.4
222,093 + BACOVA_03474 0.12 +2.3
222,094 - BACOVA_03474 0.12 +1.8
222,098 + BACOVA_03474 0.13 -0.5
222,099 - BACOVA_03474 0.13 +0.5
222,116 - BACOVA_03474 0.15 +0.5
222,120 + BACOVA_03474 0.15 -1.1
222,121 - BACOVA_03474 0.15 -1.8
222,124 + BACOVA_03474 0.15 +0.0
222,125 - BACOVA_03474 0.16 -0.3
222,158 + BACOVA_03474 0.19 -1.7
222,158 + BACOVA_03474 0.19 -1.1
222,225 + BACOVA_03474 0.26 -1.0
222,225 + BACOVA_03474 0.26 -1.4
222,249 + BACOVA_03474 0.29 -0.7
222,365 + BACOVA_03474 0.42 -0.1
222,365 + BACOVA_03474 0.42 -1.9
222,365 + BACOVA_03474 0.42 +0.9
222,402 + BACOVA_03474 0.46 -0.1
222,403 - BACOVA_03474 0.46 +3.5
222,427 - BACOVA_03474 0.48 -1.1
222,437 + BACOVA_03474 0.50 -0.2
222,438 - BACOVA_03474 0.50 +1.7
222,438 - BACOVA_03474 0.50 -2.2
222,461 + BACOVA_03474 0.52 -1.1
222,472 + BACOVA_03474 0.53 -1.7
222,472 + BACOVA_03474 0.53 +1.5
222,473 - BACOVA_03474 0.53 +1.2
222,473 - BACOVA_03474 0.53 +1.3
222,473 - BACOVA_03474 0.53 -2.8
222,512 - BACOVA_03474 0.58 -2.8
222,512 - BACOVA_03474 0.58 -3.5
222,512 - BACOVA_03474 0.58 +0.6
222,513 + BACOVA_03474 0.58 -1.8
222,545 + BACOVA_03474 0.61 +0.2
222,555 - BACOVA_03474 0.62 -0.8
222,617 + BACOVA_03474 0.69 -2.9
222,617 + BACOVA_03474 0.69 -0.5
222,728 + BACOVA_03474 0.81 +3.3
222,739 + BACOVA_03474 0.82 -0.6

Or see this region's nucleotide sequence