Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_03064

Experiment: Hyaluronic from Streptococcus equi 2.5 mg/ml (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_03063 and BACOVA_03064 are separated by 542 nucleotidesBACOVA_03064 and BACOVA_03065 are separated by 15 nucleotidesBACOVA_03065 and BACOVA_03066 are separated by 50 nucleotidesBACOVA_03066 and BACOVA_03067 are separated by 110 nucleotides BACOVA_03063: BACOVA_03063 - TonB-linked outer membrane protein, SusC/RagA family, at 133,527 to 136,613 _03063 BACOVA_03064: BACOVA_03064 - DNA-binding helix-turn-helix protein, at 137,156 to 137,575 _03064 BACOVA_03065: BACOVA_03065 - DNA-binding helix-turn-helix protein, at 137,591 to 137,995 _03065 BACOVA_03066: BACOVA_03066 - hypothetical protein, at 138,046 to 138,171 _03066 BACOVA_03067: BACOVA_03067 - hypothetical protein, at 138,282 to 139,298 _03067 Position (kb) 137 138Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 136.180 kb on - strand, within BACOVA_03063at 136.221 kb on + strand, within BACOVA_03063at 136.231 kb on - strand, within BACOVA_03063at 136.293 kb on - strand, within BACOVA_03063at 136.313 kb on - strandat 136.320 kb on - strandat 136.320 kb on - strandat 136.320 kb on - strandat 136.321 kb on + strandat 136.321 kb on + strandat 136.321 kb on + strandat 136.321 kb on + strandat 136.321 kb on + strandat 136.321 kb on + strandat 136.321 kb on + strandat 136.322 kb on - strandat 136.322 kb on - strandat 136.322 kb on - strandat 136.322 kb on - strandat 136.326 kb on + strandat 136.326 kb on + strandat 136.332 kb on + strandat 136.382 kb on + strandat 136.416 kb on - strandat 136.457 kb on + strandat 136.458 kb on - strandat 136.521 kb on + strandat 136.533 kb on + strandat 136.533 kb on + strandat 136.537 kb on - strandat 136.541 kb on - strandat 136.575 kb on - strandat 136.584 kb on + strandat 136.585 kb on - strandat 136.630 kb on + strandat 136.631 kb on - strandat 136.637 kb on - strandat 136.681 kb on + strandat 136.681 kb on + strandat 136.682 kb on - strandat 136.682 kb on - strandat 136.719 kb on + strandat 136.719 kb on + strandat 136.719 kb on + strandat 136.719 kb on + strandat 136.729 kb on + strandat 136.777 kb on - strandat 136.784 kb on + strandat 136.784 kb on + strandat 136.785 kb on - strandat 136.842 kb on + strandat 136.842 kb on + strandat 136.850 kb on + strandat 136.851 kb on - strandat 136.907 kb on - strandat 136.920 kb on + strandat 136.920 kb on + strandat 136.937 kb on + strandat 136.937 kb on + strandat 136.937 kb on + strandat 136.937 kb on + strandat 136.938 kb on - strandat 136.940 kb on + strandat 136.941 kb on - strandat 136.978 kb on - strandat 136.993 kb on + strandat 136.999 kb on + strandat 137.004 kb on - strandat 137.029 kb on + strandat 137.035 kb on + strandat 137.035 kb on + strandat 137.036 kb on - strandat 137.039 kb on + strandat 137.040 kb on - strandat 137.040 kb on - strandat 137.065 kb on + strandat 137.069 kb on - strandat 137.092 kb on + strandat 137.093 kb on - strandat 137.093 kb on - strandat 137.093 kb on - strandat 137.119 kb on - strandat 137.138 kb on + strandat 137.138 kb on + strandat 137.155 kb on + strandat 137.162 kb on - strandat 137.162 kb on - strandat 137.165 kb on - strandat 137.226 kb on - strand, within BACOVA_03064at 137.226 kb on - strand, within BACOVA_03064at 137.226 kb on - strand, within BACOVA_03064at 137.270 kb on - strand, within BACOVA_03064at 137.270 kb on - strand, within BACOVA_03064at 137.353 kb on - strand, within BACOVA_03064at 137.353 kb on - strand, within BACOVA_03064at 137.353 kb on - strand, within BACOVA_03064at 137.407 kb on + strand, within BACOVA_03064at 137.407 kb on + strand, within BACOVA_03064at 137.412 kb on - strand, within BACOVA_03064at 137.453 kb on + strand, within BACOVA_03064at 137.453 kb on + strand, within BACOVA_03064at 137.454 kb on - strand, within BACOVA_03064at 137.465 kb on - strand, within BACOVA_03064at 137.476 kb on + strand, within BACOVA_03064at 137.477 kb on - strand, within BACOVA_03064at 137.505 kb on - strand, within BACOVA_03064at 137.548 kb on - strandat 137.548 kb on - strandat 137.573 kb on + strandat 137.614 kb on + strandat 137.614 kb on + strandat 137.614 kb on + strandat 137.614 kb on + strandat 137.615 kb on - strandat 137.696 kb on - strand, within BACOVA_03065at 137.755 kb on - strand, within BACOVA_03065at 137.787 kb on + strand, within BACOVA_03065at 137.788 kb on - strand, within BACOVA_03065at 137.825 kb on + strand, within BACOVA_03065at 137.828 kb on - strand, within BACOVA_03065at 137.828 kb on - strand, within BACOVA_03065at 137.831 kb on - strand, within BACOVA_03065at 137.831 kb on - strand, within BACOVA_03065at 137.837 kb on - strand, within BACOVA_03065at 137.875 kb on + strand, within BACOVA_03065at 137.879 kb on - strand, within BACOVA_03065at 137.879 kb on - strand, within BACOVA_03065at 137.885 kb on - strand, within BACOVA_03065at 137.900 kb on - strand, within BACOVA_03065at 137.993 kb on + strandat 137.993 kb on + strandat 138.027 kb on + strandat 138.028 kb on - strandat 138.028 kb on - strandat 138.031 kb on + strandat 138.040 kb on - strandat 138.050 kb on + strandat 138.051 kb on - strandat 138.051 kb on - strandat 138.051 kb on - strandat 138.084 kb on - strand, within BACOVA_03066at 138.170 kb on - strandat 138.170 kb on - strandat 138.184 kb on + strandat 138.185 kb on - strandat 138.228 kb on + strandat 138.232 kb on + strandat 138.233 kb on - strandat 138.270 kb on + strandat 138.270 kb on + strandat 138.271 kb on - strandat 138.271 kb on - strandat 138.280 kb on + strandat 138.283 kb on + strandat 138.290 kb on + strandat 138.290 kb on + strandat 138.291 kb on - strandat 138.294 kb on + strandat 138.350 kb on + strandat 138.355 kb on + strandat 138.356 kb on - strandat 138.373 kb on - strandat 138.380 kb on + strandat 138.380 kb on + strandat 138.380 kb on + strandat 138.381 kb on - strandat 138.381 kb on - strandat 138.381 kb on - strandat 138.443 kb on - strand, within BACOVA_03067at 138.446 kb on + strand, within BACOVA_03067at 138.446 kb on + strand, within BACOVA_03067at 138.447 kb on - strand, within BACOVA_03067at 138.449 kb on + strand, within BACOVA_03067at 138.449 kb on + strand, within BACOVA_03067at 138.453 kb on + strand, within BACOVA_03067at 138.475 kb on - strand, within BACOVA_03067at 138.486 kb on + strand, within BACOVA_03067at 138.486 kb on + strand, within BACOVA_03067at 138.487 kb on - strand, within BACOVA_03067at 138.487 kb on - strand, within BACOVA_03067at 138.487 kb on - strand, within BACOVA_03067at 138.487 kb on - strand, within BACOVA_03067at 138.495 kb on - strand, within BACOVA_03067at 138.497 kb on - strand, within BACOVA_03067at 138.497 kb on - strand, within BACOVA_03067at 138.552 kb on + strand, within BACOVA_03067at 138.573 kb on + strand, within BACOVA_03067

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Per-strain Table

Position Strand Gene LocusTag Fraction Hyaluronic from Streptococcus equi 2.5 mg/ml (C)
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136,180 - BACOVA_03063 0.86 +0.5
136,221 + BACOVA_03063 0.87 -0.6
136,231 - BACOVA_03063 0.88 -0.9
136,293 - BACOVA_03063 0.90 -0.9
136,313 - +0.1
136,320 - +2.6
136,320 - +0.8
136,320 - -3.3
136,321 + -0.8
136,321 + +4.0
136,321 + +1.2
136,321 + -1.4
136,321 + -1.6
136,321 + -1.8
136,321 + -0.4
136,322 - +0.8
136,322 - +0.8
136,322 - +0.2
136,322 - -0.7
136,326 + -0.5
136,326 + +3.7
136,332 + +0.2
136,382 + +0.6
136,416 - -1.8
136,457 + -0.8
136,458 - -0.9
136,521 + +4.3
136,533 + +0.4
136,533 + -0.5
136,537 - +1.2
136,541 - -1.2
136,575 - +1.0
136,584 + -1.1
136,585 - -1.8
136,630 + +0.2
136,631 - +0.6
136,637 - +3.2
136,681 + +0.6
136,681 + -0.2
136,682 - -0.7
136,682 - +1.5
136,719 + -0.2
136,719 + +1.1
136,719 + +0.6
136,719 + -1.3
136,729 + +2.6
136,777 - +2.6
136,784 + -1.7
136,784 + +0.9
136,785 - -1.4
136,842 + -0.7
136,842 + -0.9
136,850 + +1.8
136,851 - -3.6
136,907 - -2.9
136,920 + +2.8
136,920 + +2.8
136,937 + -0.5
136,937 + +0.8
136,937 + +0.4
136,937 + -0.9
136,938 - -1.2
136,940 + -0.5
136,941 - -0.1
136,978 - +0.6
136,993 + -0.6
136,999 + -2.1
137,004 - -0.7
137,029 + -0.6
137,035 + +1.0
137,035 + -0.9
137,036 - -2.9
137,039 + -0.4
137,040 - +0.2
137,040 - -0.7
137,065 + +1.9
137,069 - -0.9
137,092 + +1.3
137,093 - +0.3
137,093 - -2.1
137,093 - -0.1
137,119 - -0.8
137,138 + +1.2
137,138 + -0.7
137,155 + +1.1
137,162 - -0.4
137,162 - +0.1
137,165 - -1.8
137,226 - BACOVA_03064 0.17 -2.6
137,226 - BACOVA_03064 0.17 -1.2
137,226 - BACOVA_03064 0.17 -3.5
137,270 - BACOVA_03064 0.27 -0.7
137,270 - BACOVA_03064 0.27 -0.2
137,353 - BACOVA_03064 0.47 -2.7
137,353 - BACOVA_03064 0.47 +0.7
137,353 - BACOVA_03064 0.47 +0.8
137,407 + BACOVA_03064 0.60 +1.1
137,407 + BACOVA_03064 0.60 -0.4
137,412 - BACOVA_03064 0.61 -3.2
137,453 + BACOVA_03064 0.71 -0.2
137,453 + BACOVA_03064 0.71 +2.3
137,454 - BACOVA_03064 0.71 -0.7
137,465 - BACOVA_03064 0.74 +4.1
137,476 + BACOVA_03064 0.76 +1.2
137,477 - BACOVA_03064 0.76 -1.5
137,505 - BACOVA_03064 0.83 +0.0
137,548 - +3.6
137,548 - -0.5
137,573 + +0.7
137,614 + -0.4
137,614 + -0.7
137,614 + +1.7
137,614 + -1.5
137,615 - +3.3
137,696 - BACOVA_03065 0.26 +0.6
137,755 - BACOVA_03065 0.40 +0.7
137,787 + BACOVA_03065 0.48 +0.6
137,788 - BACOVA_03065 0.49 -2.5
137,825 + BACOVA_03065 0.58 -0.9
137,828 - BACOVA_03065 0.59 +0.6
137,828 - BACOVA_03065 0.59 -2.8
137,831 - BACOVA_03065 0.59 +0.5
137,831 - BACOVA_03065 0.59 +0.5
137,837 - BACOVA_03065 0.61 +0.1
137,875 + BACOVA_03065 0.70 -1.3
137,879 - BACOVA_03065 0.71 -1.7
137,879 - BACOVA_03065 0.71 +1.2
137,885 - BACOVA_03065 0.73 -3.3
137,900 - BACOVA_03065 0.76 -0.9
137,993 + +2.2
137,993 + +1.0
138,027 + +0.1
138,028 - +0.9
138,028 - -2.4
138,031 + +1.3
138,040 - +1.6
138,050 + -2.3
138,051 - +0.6
138,051 - +0.2
138,051 - +0.1
138,084 - BACOVA_03066 0.30 +0.5
138,170 - -0.1
138,170 - +0.2
138,184 + +0.1
138,185 - -1.6
138,228 + +1.3
138,232 + -1.9
138,233 - +3.0
138,270 + -2.2
138,270 + -0.3
138,271 - -1.9
138,271 - +0.8
138,280 + -1.7
138,283 + +0.5
138,290 + +0.4
138,290 + -0.8
138,291 - +1.6
138,294 + -0.7
138,350 + +2.1
138,355 + +1.0
138,356 - +3.0
138,373 - +2.0
138,380 + -1.4
138,380 + -0.2
138,380 + +0.9
138,381 - -2.3
138,381 - +2.8
138,381 - -1.2
138,443 - BACOVA_03067 0.16 +3.3
138,446 + BACOVA_03067 0.16 +2.0
138,446 + BACOVA_03067 0.16 -0.5
138,447 - BACOVA_03067 0.16 +0.8
138,449 + BACOVA_03067 0.16 -2.3
138,449 + BACOVA_03067 0.16 -1.2
138,453 + BACOVA_03067 0.17 +3.7
138,475 - BACOVA_03067 0.19 +1.4
138,486 + BACOVA_03067 0.20 +0.1
138,486 + BACOVA_03067 0.20 +1.8
138,487 - BACOVA_03067 0.20 +1.4
138,487 - BACOVA_03067 0.20 +0.6
138,487 - BACOVA_03067 0.20 -0.6
138,487 - BACOVA_03067 0.20 +2.3
138,495 - BACOVA_03067 0.21 -0.9
138,497 - BACOVA_03067 0.21 -1.8
138,497 - BACOVA_03067 0.21 -1.4
138,552 + BACOVA_03067 0.27 -1.7
138,573 + BACOVA_03067 0.29 -0.5

Or see this region's nucleotide sequence