Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_02686

Experiment: Hyaluronic from Streptococcus equi 2.5 mg/ml (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_02685 and BACOVA_02686 are separated by 11 nucleotidesBACOVA_02686 and BACOVA_02687 overlap by 4 nucleotides BACOVA_02685: BACOVA_02685 - hypothetical protein, at 90,269 to 92,146 _02685 BACOVA_02686: BACOVA_02686 - hypothetical protein, at 92,158 to 93,423 _02686 BACOVA_02687: BACOVA_02687 - hypothetical protein, at 93,420 to 94,289 _02687 Position (kb) 92 93 94Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 91.245 kb on + strand, within BACOVA_02685at 91.283 kb on + strand, within BACOVA_02685at 91.316 kb on - strand, within BACOVA_02685at 91.321 kb on + strand, within BACOVA_02685at 91.321 kb on + strand, within BACOVA_02685at 91.322 kb on - strand, within BACOVA_02685at 91.324 kb on + strand, within BACOVA_02685at 91.336 kb on - strand, within BACOVA_02685at 91.455 kb on - strand, within BACOVA_02685at 91.473 kb on - strand, within BACOVA_02685at 91.554 kb on + strand, within BACOVA_02685at 91.557 kb on - strand, within BACOVA_02685at 91.590 kb on + strand, within BACOVA_02685at 91.612 kb on + strand, within BACOVA_02685at 91.626 kb on - strand, within BACOVA_02685at 91.626 kb on - strand, within BACOVA_02685at 91.627 kb on + strand, within BACOVA_02685at 91.688 kb on - strand, within BACOVA_02685at 91.699 kb on + strand, within BACOVA_02685at 91.699 kb on + strand, within BACOVA_02685at 91.700 kb on - strand, within BACOVA_02685at 91.771 kb on + strand, within BACOVA_02685at 91.786 kb on - strand, within BACOVA_02685at 91.891 kb on + strand, within BACOVA_02685at 91.910 kb on - strand, within BACOVA_02685at 92.036 kb on + strandat 92.036 kb on + strandat 92.036 kb on + strandat 92.125 kb on + strandat 92.125 kb on + strandat 92.146 kb on + strandat 92.146 kb on + strandat 92.146 kb on + strandat 92.147 kb on - strandat 92.166 kb on + strandat 92.175 kb on - strandat 92.206 kb on - strandat 92.209 kb on + strandat 92.312 kb on - strand, within BACOVA_02686at 92.320 kb on - strand, within BACOVA_02686at 92.345 kb on + strand, within BACOVA_02686at 92.346 kb on - strand, within BACOVA_02686at 92.384 kb on - strand, within BACOVA_02686at 92.400 kb on + strand, within BACOVA_02686at 92.403 kb on + strand, within BACOVA_02686at 92.407 kb on - strand, within BACOVA_02686at 92.430 kb on + strand, within BACOVA_02686at 92.431 kb on - strand, within BACOVA_02686at 92.442 kb on + strand, within BACOVA_02686at 92.442 kb on + strand, within BACOVA_02686at 92.442 kb on + strand, within BACOVA_02686at 92.454 kb on + strand, within BACOVA_02686at 92.557 kb on + strand, within BACOVA_02686at 92.558 kb on - strand, within BACOVA_02686at 92.562 kb on + strand, within BACOVA_02686at 92.562 kb on + strand, within BACOVA_02686at 92.563 kb on - strand, within BACOVA_02686at 92.680 kb on + strand, within BACOVA_02686at 92.680 kb on + strand, within BACOVA_02686at 92.708 kb on + strand, within BACOVA_02686at 92.708 kb on + strand, within BACOVA_02686at 92.708 kb on + strand, within BACOVA_02686at 92.709 kb on - strand, within BACOVA_02686at 92.763 kb on + strand, within BACOVA_02686at 92.764 kb on - strand, within BACOVA_02686at 92.852 kb on + strand, within BACOVA_02686at 92.895 kb on + strand, within BACOVA_02686at 92.904 kb on - strand, within BACOVA_02686at 92.904 kb on - strand, within BACOVA_02686at 92.926 kb on - strand, within BACOVA_02686at 92.927 kb on + strand, within BACOVA_02686at 92.936 kb on - strand, within BACOVA_02686at 93.043 kb on + strand, within BACOVA_02686at 93.043 kb on + strand, within BACOVA_02686at 93.044 kb on - strand, within BACOVA_02686at 93.047 kb on - strand, within BACOVA_02686at 93.047 kb on - strand, within BACOVA_02686at 93.074 kb on + strand, within BACOVA_02686at 93.074 kb on + strand, within BACOVA_02686at 93.074 kb on + strand, within BACOVA_02686at 93.074 kb on + strand, within BACOVA_02686at 93.075 kb on - strand, within BACOVA_02686at 93.075 kb on - strand, within BACOVA_02686at 93.117 kb on - strand, within BACOVA_02686at 93.136 kb on - strand, within BACOVA_02686at 93.138 kb on - strand, within BACOVA_02686at 93.162 kb on + strand, within BACOVA_02686at 93.162 kb on + strand, within BACOVA_02686at 93.162 kb on + strand, within BACOVA_02686at 93.164 kb on + strand, within BACOVA_02686at 93.167 kb on + strand, within BACOVA_02686at 93.168 kb on - strand, within BACOVA_02686at 93.229 kb on + strand, within BACOVA_02686at 93.230 kb on - strand, within BACOVA_02686at 93.261 kb on + strand, within BACOVA_02686at 93.261 kb on + strand, within BACOVA_02686at 93.261 kb on + strand, within BACOVA_02686at 93.266 kb on - strand, within BACOVA_02686at 93.310 kb on + strandat 93.316 kb on - strandat 93.338 kb on - strandat 93.338 kb on - strandat 93.380 kb on + strandat 93.381 kb on - strandat 93.381 kb on - strandat 93.381 kb on - strandat 93.382 kb on + strandat 93.382 kb on + strandat 93.383 kb on - strandat 93.383 kb on - strandat 93.389 kb on - strandat 93.423 kb on + strandat 93.464 kb on + strandat 93.498 kb on + strandat 93.525 kb on - strand, within BACOVA_02687at 93.528 kb on + strand, within BACOVA_02687at 93.529 kb on - strand, within BACOVA_02687at 93.613 kb on - strand, within BACOVA_02687at 93.642 kb on + strand, within BACOVA_02687at 93.642 kb on + strand, within BACOVA_02687at 93.654 kb on - strand, within BACOVA_02687at 93.670 kb on + strand, within BACOVA_02687at 93.670 kb on + strand, within BACOVA_02687at 93.671 kb on - strand, within BACOVA_02687at 93.671 kb on - strand, within BACOVA_02687at 93.672 kb on + strand, within BACOVA_02687at 93.672 kb on + strand, within BACOVA_02687at 93.672 kb on + strand, within BACOVA_02687at 93.673 kb on - strand, within BACOVA_02687at 93.698 kb on + strand, within BACOVA_02687at 93.698 kb on + strand, within BACOVA_02687at 93.712 kb on - strand, within BACOVA_02687at 93.736 kb on + strand, within BACOVA_02687at 93.736 kb on + strand, within BACOVA_02687at 93.762 kb on + strand, within BACOVA_02687at 93.762 kb on + strand, within BACOVA_02687at 93.765 kb on + strand, within BACOVA_02687at 93.769 kb on - strand, within BACOVA_02687at 93.769 kb on - strand, within BACOVA_02687at 93.806 kb on + strand, within BACOVA_02687at 93.816 kb on - strand, within BACOVA_02687at 93.863 kb on + strand, within BACOVA_02687at 93.879 kb on + strand, within BACOVA_02687at 93.896 kb on - strand, within BACOVA_02687at 93.913 kb on + strand, within BACOVA_02687at 93.913 kb on + strand, within BACOVA_02687at 93.916 kb on + strand, within BACOVA_02687at 93.916 kb on + strand, within BACOVA_02687at 93.916 kb on + strand, within BACOVA_02687at 93.917 kb on - strand, within BACOVA_02687at 93.956 kb on + strand, within BACOVA_02687at 93.956 kb on + strand, within BACOVA_02687at 93.962 kb on + strand, within BACOVA_02687at 93.963 kb on - strand, within BACOVA_02687at 93.966 kb on - strand, within BACOVA_02687at 93.983 kb on - strand, within BACOVA_02687at 94.034 kb on + strand, within BACOVA_02687at 94.082 kb on + strand, within BACOVA_02687at 94.097 kb on + strand, within BACOVA_02687at 94.104 kb on + strand, within BACOVA_02687at 94.131 kb on + strand, within BACOVA_02687at 94.134 kb on + strand, within BACOVA_02687at 94.142 kb on + strand, within BACOVA_02687at 94.164 kb on - strand, within BACOVA_02687at 94.172 kb on + strand, within BACOVA_02687at 94.192 kb on + strand, within BACOVA_02687at 94.199 kb on + strand, within BACOVA_02687at 94.201 kb on + strand, within BACOVA_02687at 94.202 kb on - strand, within BACOVA_02687at 94.202 kb on - strand, within BACOVA_02687at 94.202 kb on - strand, within BACOVA_02687at 94.214 kb on + strandat 94.263 kb on - strandat 94.273 kb on - strandat 94.316 kb on + strandat 94.317 kb on - strandat 94.360 kb on + strandat 94.388 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Hyaluronic from Streptococcus equi 2.5 mg/ml (C)
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91,245 + BACOVA_02685 0.52 -0.6
91,283 + BACOVA_02685 0.54 -0.2
91,316 - BACOVA_02685 0.56 +1.3
91,321 + BACOVA_02685 0.56 -0.2
91,321 + BACOVA_02685 0.56 +1.9
91,322 - BACOVA_02685 0.56 +0.3
91,324 + BACOVA_02685 0.56 -0.1
91,336 - BACOVA_02685 0.57 -1.3
91,455 - BACOVA_02685 0.63 -0.1
91,473 - BACOVA_02685 0.64 +0.5
91,554 + BACOVA_02685 0.68 +0.7
91,557 - BACOVA_02685 0.69 -1.7
91,590 + BACOVA_02685 0.70 +0.5
91,612 + BACOVA_02685 0.72 -2.3
91,626 - BACOVA_02685 0.72 -0.8
91,626 - BACOVA_02685 0.72 -0.4
91,627 + BACOVA_02685 0.72 -0.4
91,688 - BACOVA_02685 0.76 -1.2
91,699 + BACOVA_02685 0.76 +1.5
91,699 + BACOVA_02685 0.76 -0.2
91,700 - BACOVA_02685 0.76 -0.2
91,771 + BACOVA_02685 0.80 -2.1
91,786 - BACOVA_02685 0.81 -1.9
91,891 + BACOVA_02685 0.86 -2.8
91,910 - BACOVA_02685 0.87 -1.8
92,036 + -0.8
92,036 + +3.5
92,036 + -1.3
92,125 + +0.9
92,125 + -1.3
92,146 + +0.8
92,146 + -0.1
92,146 + -1.9
92,147 - -3.4
92,166 + -0.1
92,175 - -1.2
92,206 - +0.5
92,209 + -0.2
92,312 - BACOVA_02686 0.12 -0.1
92,320 - BACOVA_02686 0.13 -0.1
92,345 + BACOVA_02686 0.15 -2.7
92,346 - BACOVA_02686 0.15 +0.8
92,384 - BACOVA_02686 0.18 -1.4
92,400 + BACOVA_02686 0.19 +4.9
92,403 + BACOVA_02686 0.19 -1.4
92,407 - BACOVA_02686 0.20 +0.9
92,430 + BACOVA_02686 0.21 -0.5
92,431 - BACOVA_02686 0.22 -1.2
92,442 + BACOVA_02686 0.22 +0.6
92,442 + BACOVA_02686 0.22 -1.8
92,442 + BACOVA_02686 0.22 -0.7
92,454 + BACOVA_02686 0.23 +0.5
92,557 + BACOVA_02686 0.32 +0.7
92,558 - BACOVA_02686 0.32 -0.1
92,562 + BACOVA_02686 0.32 -1.3
92,562 + BACOVA_02686 0.32 -1.5
92,563 - BACOVA_02686 0.32 +1.5
92,680 + BACOVA_02686 0.41 -1.7
92,680 + BACOVA_02686 0.41 -1.2
92,708 + BACOVA_02686 0.43 -1.6
92,708 + BACOVA_02686 0.43 +1.1
92,708 + BACOVA_02686 0.43 -1.7
92,709 - BACOVA_02686 0.44 -3.0
92,763 + BACOVA_02686 0.48 -2.6
92,764 - BACOVA_02686 0.48 -0.7
92,852 + BACOVA_02686 0.55 +0.8
92,895 + BACOVA_02686 0.58 +0.8
92,904 - BACOVA_02686 0.59 +0.4
92,904 - BACOVA_02686 0.59 -2.5
92,926 - BACOVA_02686 0.61 +1.0
92,927 + BACOVA_02686 0.61 -0.5
92,936 - BACOVA_02686 0.61 +3.1
93,043 + BACOVA_02686 0.70 +0.8
93,043 + BACOVA_02686 0.70 -3.2
93,044 - BACOVA_02686 0.70 -0.5
93,047 - BACOVA_02686 0.70 +1.4
93,047 - BACOVA_02686 0.70 -2.2
93,074 + BACOVA_02686 0.72 +1.7
93,074 + BACOVA_02686 0.72 +0.5
93,074 + BACOVA_02686 0.72 -0.3
93,074 + BACOVA_02686 0.72 +0.3
93,075 - BACOVA_02686 0.72 +0.5
93,075 - BACOVA_02686 0.72 +2.5
93,117 - BACOVA_02686 0.76 +1.3
93,136 - BACOVA_02686 0.77 -0.9
93,138 - BACOVA_02686 0.77 -0.5
93,162 + BACOVA_02686 0.79 -1.0
93,162 + BACOVA_02686 0.79 -2.8
93,162 + BACOVA_02686 0.79 +1.1
93,164 + BACOVA_02686 0.79 -0.8
93,167 + BACOVA_02686 0.80 +0.9
93,168 - BACOVA_02686 0.80 -2.2
93,229 + BACOVA_02686 0.85 -1.1
93,230 - BACOVA_02686 0.85 -0.4
93,261 + BACOVA_02686 0.87 +2.2
93,261 + BACOVA_02686 0.87 -0.4
93,261 + BACOVA_02686 0.87 +1.5
93,266 - BACOVA_02686 0.88 +2.5
93,310 + -2.6
93,316 - -1.3
93,338 - +2.5
93,338 - -1.0
93,380 + +0.9
93,381 - -0.2
93,381 - -1.5
93,381 - +1.1
93,382 + -1.5
93,382 + +1.4
93,383 - -0.9
93,383 - -3.3
93,389 - -1.3
93,423 + -1.6
93,464 + -1.3
93,498 + +0.5
93,525 - BACOVA_02687 0.12 -3.0
93,528 + BACOVA_02687 0.12 -1.2
93,529 - BACOVA_02687 0.13 -1.1
93,613 - BACOVA_02687 0.22 +0.7
93,642 + BACOVA_02687 0.26 +0.6
93,642 + BACOVA_02687 0.26 +0.7
93,654 - BACOVA_02687 0.27 -0.1
93,670 + BACOVA_02687 0.29 -1.3
93,670 + BACOVA_02687 0.29 -1.5
93,671 - BACOVA_02687 0.29 -0.8
93,671 - BACOVA_02687 0.29 -1.2
93,672 + BACOVA_02687 0.29 -0.4
93,672 + BACOVA_02687 0.29 -0.1
93,672 + BACOVA_02687 0.29 -0.6
93,673 - BACOVA_02687 0.29 +0.3
93,698 + BACOVA_02687 0.32 -1.8
93,698 + BACOVA_02687 0.32 +1.3
93,712 - BACOVA_02687 0.34 +0.9
93,736 + BACOVA_02687 0.36 +1.1
93,736 + BACOVA_02687 0.36 -2.8
93,762 + BACOVA_02687 0.39 -0.2
93,762 + BACOVA_02687 0.39 -3.2
93,765 + BACOVA_02687 0.40 +0.5
93,769 - BACOVA_02687 0.40 +1.5
93,769 - BACOVA_02687 0.40 +2.1
93,806 + BACOVA_02687 0.44 -2.0
93,816 - BACOVA_02687 0.46 -0.2
93,863 + BACOVA_02687 0.51 -0.7
93,879 + BACOVA_02687 0.53 -1.4
93,896 - BACOVA_02687 0.55 -1.7
93,913 + BACOVA_02687 0.57 -0.1
93,913 + BACOVA_02687 0.57 -2.3
93,916 + BACOVA_02687 0.57 +0.9
93,916 + BACOVA_02687 0.57 +0.6
93,916 + BACOVA_02687 0.57 +1.1
93,917 - BACOVA_02687 0.57 -0.5
93,956 + BACOVA_02687 0.62 -0.6
93,956 + BACOVA_02687 0.62 -0.8
93,962 + BACOVA_02687 0.62 +2.1
93,963 - BACOVA_02687 0.62 +0.0
93,966 - BACOVA_02687 0.63 +0.5
93,983 - BACOVA_02687 0.65 -1.1
94,034 + BACOVA_02687 0.71 +2.7
94,082 + BACOVA_02687 0.76 +0.5
94,097 + BACOVA_02687 0.78 +0.4
94,104 + BACOVA_02687 0.79 -1.7
94,131 + BACOVA_02687 0.82 +3.7
94,134 + BACOVA_02687 0.82 -1.7
94,142 + BACOVA_02687 0.83 +0.2
94,164 - BACOVA_02687 0.86 -1.1
94,172 + BACOVA_02687 0.86 -0.7
94,192 + BACOVA_02687 0.89 -1.5
94,199 + BACOVA_02687 0.90 +0.3
94,201 + BACOVA_02687 0.90 +1.1
94,202 - BACOVA_02687 0.90 -2.2
94,202 - BACOVA_02687 0.90 +2.6
94,202 - BACOVA_02687 0.90 +3.9
94,214 + -1.5
94,263 - -1.0
94,273 - -0.5
94,316 + -0.6
94,317 - -0.5
94,360 + -0.5
94,388 - -0.4

Or see this region's nucleotide sequence