Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_02471

Experiment: Hyaluronic from Streptococcus equi 2.5 mg/ml (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_02470 and BACOVA_02471 are separated by 42 nucleotidesBACOVA_02471 and BACOVA_02472 are separated by 37 nucleotides BACOVA_02470: BACOVA_02470 - NAD dependent epimerase/dehydratase family protein, at 233,085 to 234,047 _02470 BACOVA_02471: BACOVA_02471 - glycosyltransferase, group 2 family protein, at 234,090 to 234,845 _02471 BACOVA_02472: BACOVA_02472 - undecaprenyl-phosphate glucose phosphotransferase, at 234,883 to 236,289 _02472 Position (kb) 234 235Strain fitness (log2 ratio) -1 0 1 2 3 4 5 6at 233.099 kb on - strandat 233.099 kb on - strandat 233.099 kb on - strandat 233.102 kb on + strandat 233.130 kb on - strandat 233.175 kb on - strandat 233.238 kb on - strand, within BACOVA_02470at 233.275 kb on - strand, within BACOVA_02470at 233.275 kb on - strand, within BACOVA_02470at 233.275 kb on - strand, within BACOVA_02470at 233.288 kb on - strand, within BACOVA_02470at 233.288 kb on - strand, within BACOVA_02470at 233.366 kb on + strand, within BACOVA_02470at 233.397 kb on - strand, within BACOVA_02470at 233.397 kb on - strand, within BACOVA_02470at 233.431 kb on - strand, within BACOVA_02470at 233.449 kb on - strand, within BACOVA_02470at 233.449 kb on - strand, within BACOVA_02470at 233.449 kb on - strand, within BACOVA_02470at 233.449 kb on - strand, within BACOVA_02470at 233.472 kb on + strand, within BACOVA_02470at 233.473 kb on - strand, within BACOVA_02470at 233.484 kb on - strand, within BACOVA_02470at 233.502 kb on - strand, within BACOVA_02470at 233.545 kb on - strand, within BACOVA_02470at 233.545 kb on - strand, within BACOVA_02470at 233.559 kb on - strand, within BACOVA_02470at 233.559 kb on - strand, within BACOVA_02470at 233.559 kb on - strand, within BACOVA_02470at 233.561 kb on - strand, within BACOVA_02470at 233.634 kb on - strand, within BACOVA_02470at 233.674 kb on - strand, within BACOVA_02470at 233.674 kb on - strand, within BACOVA_02470at 233.752 kb on - strand, within BACOVA_02470at 233.755 kb on - strand, within BACOVA_02470at 233.907 kb on - strand, within BACOVA_02470at 233.913 kb on - strand, within BACOVA_02470at 233.975 kb on - strandat 233.997 kb on - strandat 233.997 kb on - strandat 234.002 kb on - strandat 234.036 kb on - strandat 234.036 kb on - strandat 234.039 kb on + strandat 234.040 kb on - strandat 234.059 kb on + strandat 234.060 kb on - strandat 234.060 kb on - strandat 234.066 kb on + strandat 234.069 kb on + strandat 234.106 kb on + strandat 234.118 kb on - strandat 234.171 kb on + strand, within BACOVA_02471at 234.173 kb on + strand, within BACOVA_02471at 234.181 kb on + strand, within BACOVA_02471at 234.182 kb on - strand, within BACOVA_02471at 234.188 kb on + strand, within BACOVA_02471at 234.240 kb on + strand, within BACOVA_02471at 234.245 kb on - strand, within BACOVA_02471at 234.264 kb on - strand, within BACOVA_02471at 234.284 kb on + strand, within BACOVA_02471at 234.284 kb on + strand, within BACOVA_02471at 234.288 kb on + strand, within BACOVA_02471at 234.289 kb on - strand, within BACOVA_02471at 234.303 kb on - strand, within BACOVA_02471at 234.331 kb on + strand, within BACOVA_02471at 234.331 kb on + strand, within BACOVA_02471at 234.332 kb on - strand, within BACOVA_02471at 234.369 kb on - strand, within BACOVA_02471at 234.377 kb on - strand, within BACOVA_02471at 234.391 kb on + strand, within BACOVA_02471at 234.424 kb on + strand, within BACOVA_02471at 234.427 kb on - strand, within BACOVA_02471at 234.427 kb on - strand, within BACOVA_02471at 234.546 kb on + strand, within BACOVA_02471at 234.547 kb on - strand, within BACOVA_02471at 234.547 kb on - strand, within BACOVA_02471at 234.547 kb on - strand, within BACOVA_02471at 234.619 kb on + strand, within BACOVA_02471at 234.619 kb on + strand, within BACOVA_02471at 234.620 kb on - strand, within BACOVA_02471at 234.630 kb on + strand, within BACOVA_02471at 234.631 kb on - strand, within BACOVA_02471at 234.660 kb on + strand, within BACOVA_02471at 234.661 kb on - strand, within BACOVA_02471at 234.661 kb on - strand, within BACOVA_02471at 234.661 kb on - strand, within BACOVA_02471at 234.672 kb on + strand, within BACOVA_02471at 234.672 kb on + strand, within BACOVA_02471at 234.672 kb on + strand, within BACOVA_02471at 234.717 kb on - strand, within BACOVA_02471at 234.723 kb on - strand, within BACOVA_02471at 234.723 kb on - strand, within BACOVA_02471at 234.746 kb on + strand, within BACOVA_02471at 234.747 kb on - strand, within BACOVA_02471at 234.747 kb on - strand, within BACOVA_02471at 234.753 kb on + strand, within BACOVA_02471at 234.754 kb on - strand, within BACOVA_02471at 234.754 kb on - strand, within BACOVA_02471at 234.754 kb on - strand, within BACOVA_02471at 234.770 kb on - strandat 234.776 kb on + strandat 234.776 kb on + strandat 234.972 kb on + strandat 235.002 kb on + strandat 235.018 kb on - strandat 235.055 kb on + strand, within BACOVA_02472at 235.056 kb on - strand, within BACOVA_02472at 235.062 kb on + strand, within BACOVA_02472at 235.063 kb on - strand, within BACOVA_02472at 235.063 kb on - strand, within BACOVA_02472at 235.065 kb on + strand, within BACOVA_02472at 235.100 kb on + strand, within BACOVA_02472at 235.117 kb on - strand, within BACOVA_02472at 235.117 kb on - strand, within BACOVA_02472at 235.130 kb on + strand, within BACOVA_02472at 235.168 kb on - strand, within BACOVA_02472at 235.223 kb on - strand, within BACOVA_02472at 235.223 kb on - strand, within BACOVA_02472at 235.232 kb on + strand, within BACOVA_02472at 235.235 kb on + strand, within BACOVA_02472at 235.245 kb on + strand, within BACOVA_02472at 235.311 kb on + strand, within BACOVA_02472at 235.447 kb on + strand, within BACOVA_02472at 235.447 kb on + strand, within BACOVA_02472at 235.448 kb on - strand, within BACOVA_02472at 235.469 kb on + strand, within BACOVA_02472at 235.503 kb on + strand, within BACOVA_02472at 235.564 kb on + strand, within BACOVA_02472at 235.565 kb on - strand, within BACOVA_02472at 235.594 kb on - strand, within BACOVA_02472at 235.602 kb on + strand, within BACOVA_02472at 235.603 kb on - strand, within BACOVA_02472at 235.603 kb on - strand, within BACOVA_02472at 235.615 kb on + strand, within BACOVA_02472at 235.627 kb on - strand, within BACOVA_02472at 235.627 kb on - strand, within BACOVA_02472at 235.707 kb on + strand, within BACOVA_02472at 235.743 kb on - strand, within BACOVA_02472at 235.773 kb on + strand, within BACOVA_02472at 235.776 kb on - strand, within BACOVA_02472at 235.799 kb on + strand, within BACOVA_02472

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Per-strain Table

Position Strand Gene LocusTag Fraction Hyaluronic from Streptococcus equi 2.5 mg/ml (C)
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233,099 - +3.4
233,099 - +1.8
233,099 - +3.1
233,102 + +2.3
233,130 - +2.9
233,175 - +2.5
233,238 - BACOVA_02470 0.16 +2.0
233,275 - BACOVA_02470 0.20 +0.9
233,275 - BACOVA_02470 0.20 +1.1
233,275 - BACOVA_02470 0.20 +1.2
233,288 - BACOVA_02470 0.21 +2.0
233,288 - BACOVA_02470 0.21 +4.5
233,366 + BACOVA_02470 0.29 +1.7
233,397 - BACOVA_02470 0.32 +3.0
233,397 - BACOVA_02470 0.32 -0.0
233,431 - BACOVA_02470 0.36 +1.5
233,449 - BACOVA_02470 0.38 +4.1
233,449 - BACOVA_02470 0.38 +1.4
233,449 - BACOVA_02470 0.38 +2.2
233,449 - BACOVA_02470 0.38 +2.5
233,472 + BACOVA_02470 0.40 +3.3
233,473 - BACOVA_02470 0.40 +4.5
233,484 - BACOVA_02470 0.41 +1.9
233,502 - BACOVA_02470 0.43 +4.7
233,545 - BACOVA_02470 0.48 +3.1
233,545 - BACOVA_02470 0.48 +1.4
233,559 - BACOVA_02470 0.49 +3.2
233,559 - BACOVA_02470 0.49 +1.1
233,559 - BACOVA_02470 0.49 +0.5
233,561 - BACOVA_02470 0.49 +3.4
233,634 - BACOVA_02470 0.57 +4.1
233,674 - BACOVA_02470 0.61 +3.9
233,674 - BACOVA_02470 0.61 +0.2
233,752 - BACOVA_02470 0.69 +3.4
233,755 - BACOVA_02470 0.70 +1.7
233,907 - BACOVA_02470 0.85 +3.7
233,913 - BACOVA_02470 0.86 +0.8
233,975 - +3.3
233,997 - -0.5
233,997 - +3.4
234,002 - +3.1
234,036 - +3.7
234,036 - +5.4
234,039 + +0.5
234,040 - +2.1
234,059 + +0.5
234,060 - +2.0
234,060 - +2.8
234,066 + -0.5
234,069 + +2.0
234,106 + +4.0
234,118 - +2.7
234,171 + BACOVA_02471 0.11 +3.5
234,173 + BACOVA_02471 0.11 +3.8
234,181 + BACOVA_02471 0.12 +2.3
234,182 - BACOVA_02471 0.12 +3.6
234,188 + BACOVA_02471 0.13 +3.0
234,240 + BACOVA_02471 0.20 +4.0
234,245 - BACOVA_02471 0.21 +3.4
234,264 - BACOVA_02471 0.23 +0.3
234,284 + BACOVA_02471 0.26 +2.8
234,284 + BACOVA_02471 0.26 +5.1
234,288 + BACOVA_02471 0.26 +3.4
234,289 - BACOVA_02471 0.26 +2.8
234,303 - BACOVA_02471 0.28 +1.8
234,331 + BACOVA_02471 0.32 +3.3
234,331 + BACOVA_02471 0.32 +3.8
234,332 - BACOVA_02471 0.32 +1.1
234,369 - BACOVA_02471 0.37 +4.5
234,377 - BACOVA_02471 0.38 -0.0
234,391 + BACOVA_02471 0.40 +3.1
234,424 + BACOVA_02471 0.44 +2.3
234,427 - BACOVA_02471 0.45 +3.5
234,427 - BACOVA_02471 0.45 +2.7
234,546 + BACOVA_02471 0.60 -0.0
234,547 - BACOVA_02471 0.60 +3.2
234,547 - BACOVA_02471 0.60 +2.5
234,547 - BACOVA_02471 0.60 +2.8
234,619 + BACOVA_02471 0.70 +3.9
234,619 + BACOVA_02471 0.70 +2.0
234,620 - BACOVA_02471 0.70 +3.0
234,630 + BACOVA_02471 0.71 +5.9
234,631 - BACOVA_02471 0.72 +4.3
234,660 + BACOVA_02471 0.75 +2.2
234,661 - BACOVA_02471 0.76 +2.0
234,661 - BACOVA_02471 0.76 +3.1
234,661 - BACOVA_02471 0.76 +3.3
234,672 + BACOVA_02471 0.77 +5.0
234,672 + BACOVA_02471 0.77 +3.0
234,672 + BACOVA_02471 0.77 +1.8
234,717 - BACOVA_02471 0.83 +4.0
234,723 - BACOVA_02471 0.84 +0.5
234,723 - BACOVA_02471 0.84 +3.2
234,746 + BACOVA_02471 0.87 +3.8
234,747 - BACOVA_02471 0.87 +3.1
234,747 - BACOVA_02471 0.87 -0.0
234,753 + BACOVA_02471 0.88 +0.7
234,754 - BACOVA_02471 0.88 +2.5
234,754 - BACOVA_02471 0.88 +2.4
234,754 - BACOVA_02471 0.88 +2.4
234,770 - +4.2
234,776 + +2.0
234,776 + +4.1
234,972 + +4.2
235,002 + +4.8
235,018 - +1.6
235,055 + BACOVA_02472 0.12 +3.5
235,056 - BACOVA_02472 0.12 +0.5
235,062 + BACOVA_02472 0.13 +2.1
235,063 - BACOVA_02472 0.13 +2.7
235,063 - BACOVA_02472 0.13 +3.0
235,065 + BACOVA_02472 0.13 +2.9
235,100 + BACOVA_02472 0.15 +2.3
235,117 - BACOVA_02472 0.17 +3.0
235,117 - BACOVA_02472 0.17 +3.2
235,130 + BACOVA_02472 0.18 -1.0
235,168 - BACOVA_02472 0.20 +2.7
235,223 - BACOVA_02472 0.24 +2.9
235,223 - BACOVA_02472 0.24 +3.2
235,232 + BACOVA_02472 0.25 +1.2
235,235 + BACOVA_02472 0.25 +2.5
235,245 + BACOVA_02472 0.26 +3.2
235,311 + BACOVA_02472 0.30 +3.3
235,447 + BACOVA_02472 0.40 +3.0
235,447 + BACOVA_02472 0.40 -0.5
235,448 - BACOVA_02472 0.40 +2.6
235,469 + BACOVA_02472 0.42 +1.3
235,503 + BACOVA_02472 0.44 +4.0
235,564 + BACOVA_02472 0.48 +3.5
235,565 - BACOVA_02472 0.48 +3.9
235,594 - BACOVA_02472 0.51 +4.3
235,602 + BACOVA_02472 0.51 +3.9
235,603 - BACOVA_02472 0.51 +0.4
235,603 - BACOVA_02472 0.51 +4.0
235,615 + BACOVA_02472 0.52 +3.3
235,627 - BACOVA_02472 0.53 +3.5
235,627 - BACOVA_02472 0.53 +3.0
235,707 + BACOVA_02472 0.59 +3.0
235,743 - BACOVA_02472 0.61 +0.5
235,773 + BACOVA_02472 0.63 +3.1
235,776 - BACOVA_02472 0.63 +0.3
235,799 + BACOVA_02472 0.65 -0.8

Or see this region's nucleotide sequence