Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_01806

Experiment: Hyaluronic from Streptococcus equi 2.5 mg/ml (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_01805 and BACOVA_01806 are separated by 5 nucleotidesBACOVA_01806 and BACOVA_01807 are separated by 44 nucleotides BACOVA_01805: BACOVA_01805 - hypothetical protein, at 234,759 to 235,829 _01805 BACOVA_01806: BACOVA_01806 - hypothetical protein, at 235,835 to 237,022 _01806 BACOVA_01807: BACOVA_01807 - hypothetical protein, at 237,067 to 238,317 _01807 Position (kb) 235 236 237 238Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 234.842 kb on + strandat 234.843 kb on - strandat 234.928 kb on - strand, within BACOVA_01805at 234.966 kb on - strand, within BACOVA_01805at 234.982 kb on + strand, within BACOVA_01805at 234.989 kb on + strand, within BACOVA_01805at 235.019 kb on + strand, within BACOVA_01805at 235.020 kb on - strand, within BACOVA_01805at 235.043 kb on + strand, within BACOVA_01805at 235.044 kb on - strand, within BACOVA_01805at 235.057 kb on + strand, within BACOVA_01805at 235.057 kb on + strand, within BACOVA_01805at 235.058 kb on - strand, within BACOVA_01805at 235.058 kb on - strand, within BACOVA_01805at 235.058 kb on - strand, within BACOVA_01805at 235.070 kb on + strand, within BACOVA_01805at 235.070 kb on + strand, within BACOVA_01805at 235.135 kb on - strand, within BACOVA_01805at 235.135 kb on - strand, within BACOVA_01805at 235.212 kb on + strand, within BACOVA_01805at 235.212 kb on + strand, within BACOVA_01805at 235.226 kb on + strand, within BACOVA_01805at 235.227 kb on - strand, within BACOVA_01805at 235.293 kb on + strand, within BACOVA_01805at 235.344 kb on - strand, within BACOVA_01805at 235.344 kb on - strand, within BACOVA_01805at 235.364 kb on + strand, within BACOVA_01805at 235.400 kb on - strand, within BACOVA_01805at 235.406 kb on + strand, within BACOVA_01805at 235.408 kb on + strand, within BACOVA_01805at 235.409 kb on - strand, within BACOVA_01805at 235.433 kb on + strand, within BACOVA_01805at 235.434 kb on - strand, within BACOVA_01805at 235.502 kb on + strand, within BACOVA_01805at 235.518 kb on + strand, within BACOVA_01805at 235.519 kb on - strand, within BACOVA_01805at 235.565 kb on + strand, within BACOVA_01805at 235.566 kb on - strand, within BACOVA_01805at 235.594 kb on - strand, within BACOVA_01805at 235.595 kb on + strand, within BACOVA_01805at 235.595 kb on + strand, within BACOVA_01805at 235.596 kb on - strand, within BACOVA_01805at 235.611 kb on - strand, within BACOVA_01805at 235.672 kb on - strand, within BACOVA_01805at 235.672 kb on - strand, within BACOVA_01805at 235.759 kb on + strandat 235.760 kb on - strandat 235.762 kb on + strandat 235.762 kb on + strandat 235.762 kb on + strandat 235.763 kb on - strandat 235.763 kb on - strandat 235.765 kb on - strandat 235.768 kb on - strandat 235.801 kb on - strandat 235.812 kb on + strandat 235.817 kb on + strandat 235.817 kb on + strandat 235.824 kb on + strandat 235.825 kb on - strandat 235.829 kb on + strandat 235.830 kb on - strandat 235.866 kb on + strandat 235.866 kb on + strandat 235.867 kb on - strandat 235.877 kb on + strandat 235.912 kb on + strandat 235.956 kb on - strand, within BACOVA_01806at 235.977 kb on - strand, within BACOVA_01806at 236.057 kb on + strand, within BACOVA_01806at 236.060 kb on - strand, within BACOVA_01806at 236.061 kb on + strand, within BACOVA_01806at 236.061 kb on + strand, within BACOVA_01806at 236.062 kb on - strand, within BACOVA_01806at 236.067 kb on - strand, within BACOVA_01806at 236.084 kb on - strand, within BACOVA_01806at 236.092 kb on - strand, within BACOVA_01806at 236.104 kb on + strand, within BACOVA_01806at 236.107 kb on - strand, within BACOVA_01806at 236.113 kb on - strand, within BACOVA_01806at 236.126 kb on + strand, within BACOVA_01806at 236.149 kb on + strand, within BACOVA_01806at 236.216 kb on - strand, within BACOVA_01806at 236.222 kb on + strand, within BACOVA_01806at 236.253 kb on + strand, within BACOVA_01806at 236.276 kb on + strand, within BACOVA_01806at 236.314 kb on + strand, within BACOVA_01806at 236.315 kb on - strand, within BACOVA_01806at 236.316 kb on + strand, within BACOVA_01806at 236.321 kb on + strand, within BACOVA_01806at 236.368 kb on + strand, within BACOVA_01806at 236.368 kb on + strand, within BACOVA_01806at 236.374 kb on + strand, within BACOVA_01806at 236.374 kb on + strand, within BACOVA_01806at 236.374 kb on + strand, within BACOVA_01806at 236.375 kb on - strand, within BACOVA_01806at 236.375 kb on - strand, within BACOVA_01806at 236.375 kb on - strand, within BACOVA_01806at 236.399 kb on - strand, within BACOVA_01806at 236.433 kb on - strand, within BACOVA_01806at 236.465 kb on - strand, within BACOVA_01806at 236.499 kb on + strand, within BACOVA_01806at 236.515 kb on - strand, within BACOVA_01806at 236.515 kb on - strand, within BACOVA_01806at 236.515 kb on - strand, within BACOVA_01806at 236.528 kb on - strand, within BACOVA_01806at 236.596 kb on + strand, within BACOVA_01806at 236.631 kb on + strand, within BACOVA_01806at 236.655 kb on - strand, within BACOVA_01806at 236.655 kb on - strand, within BACOVA_01806at 236.665 kb on + strand, within BACOVA_01806at 236.690 kb on + strand, within BACOVA_01806at 236.690 kb on + strand, within BACOVA_01806at 236.768 kb on - strand, within BACOVA_01806at 236.768 kb on - strand, within BACOVA_01806at 236.772 kb on + strand, within BACOVA_01806at 236.772 kb on + strand, within BACOVA_01806at 236.794 kb on + strand, within BACOVA_01806at 236.794 kb on + strand, within BACOVA_01806at 236.795 kb on - strand, within BACOVA_01806at 236.795 kb on - strand, within BACOVA_01806at 236.795 kb on - strand, within BACOVA_01806at 236.796 kb on + strand, within BACOVA_01806at 236.797 kb on - strand, within BACOVA_01806at 236.797 kb on - strand, within BACOVA_01806at 236.797 kb on - strand, within BACOVA_01806at 236.798 kb on + strand, within BACOVA_01806at 236.807 kb on - strand, within BACOVA_01806at 236.822 kb on + strand, within BACOVA_01806at 236.823 kb on - strand, within BACOVA_01806at 236.894 kb on + strand, within BACOVA_01806at 236.894 kb on + strand, within BACOVA_01806at 236.895 kb on - strand, within BACOVA_01806at 236.897 kb on + strand, within BACOVA_01806at 236.898 kb on - strand, within BACOVA_01806at 236.960 kb on + strandat 236.963 kb on - strandat 236.970 kb on - strandat 236.975 kb on - strandat 237.022 kb on + strandat 237.022 kb on + strandat 237.052 kb on - strandat 237.059 kb on - strandat 237.059 kb on - strandat 237.063 kb on - strandat 237.068 kb on + strandat 237.079 kb on + strandat 237.080 kb on - strandat 237.124 kb on - strandat 237.148 kb on - strandat 237.178 kb on - strandat 237.203 kb on - strand, within BACOVA_01807at 237.209 kb on + strand, within BACOVA_01807at 237.224 kb on - strand, within BACOVA_01807at 237.244 kb on - strand, within BACOVA_01807at 237.244 kb on - strand, within BACOVA_01807at 237.244 kb on - strand, within BACOVA_01807at 237.252 kb on + strand, within BACOVA_01807at 237.252 kb on + strand, within BACOVA_01807at 237.277 kb on + strand, within BACOVA_01807at 237.383 kb on + strand, within BACOVA_01807at 237.418 kb on + strand, within BACOVA_01807at 237.463 kb on + strand, within BACOVA_01807at 237.498 kb on + strand, within BACOVA_01807at 237.499 kb on - strand, within BACOVA_01807at 237.499 kb on - strand, within BACOVA_01807at 237.546 kb on + strand, within BACOVA_01807at 237.546 kb on + strand, within BACOVA_01807at 237.546 kb on + strand, within BACOVA_01807at 237.547 kb on - strand, within BACOVA_01807at 237.547 kb on - strand, within BACOVA_01807at 237.547 kb on - strand, within BACOVA_01807at 237.547 kb on - strand, within BACOVA_01807at 237.547 kb on - strand, within BACOVA_01807at 237.547 kb on - strand, within BACOVA_01807at 237.547 kb on - strand, within BACOVA_01807at 237.549 kb on - strand, within BACOVA_01807at 237.560 kb on - strand, within BACOVA_01807at 237.580 kb on + strand, within BACOVA_01807at 237.581 kb on - strand, within BACOVA_01807at 237.581 kb on - strand, within BACOVA_01807at 237.670 kb on + strand, within BACOVA_01807at 237.671 kb on - strand, within BACOVA_01807at 237.720 kb on - strand, within BACOVA_01807at 237.806 kb on - strand, within BACOVA_01807at 237.811 kb on - strand, within BACOVA_01807at 237.848 kb on + strand, within BACOVA_01807at 237.848 kb on + strand, within BACOVA_01807at 237.849 kb on - strand, within BACOVA_01807at 237.871 kb on + strand, within BACOVA_01807at 237.877 kb on - strand, within BACOVA_01807at 237.877 kb on - strand, within BACOVA_01807at 237.877 kb on - strand, within BACOVA_01807at 237.890 kb on + strand, within BACOVA_01807at 237.890 kb on + strand, within BACOVA_01807at 237.891 kb on - strand, within BACOVA_01807at 237.891 kb on - strand, within BACOVA_01807at 237.892 kb on + strand, within BACOVA_01807at 237.968 kb on + strand, within BACOVA_01807at 237.969 kb on - strand, within BACOVA_01807at 237.993 kb on - strand, within BACOVA_01807at 237.997 kb on + strand, within BACOVA_01807at 237.997 kb on + strand, within BACOVA_01807

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Per-strain Table

Position Strand Gene LocusTag Fraction Hyaluronic from Streptococcus equi 2.5 mg/ml (C)
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234,842 + -0.7
234,843 - +1.3
234,928 - BACOVA_01805 0.16 +1.0
234,966 - BACOVA_01805 0.19 -2.9
234,982 + BACOVA_01805 0.21 -1.6
234,989 + BACOVA_01805 0.21 -2.2
235,019 + BACOVA_01805 0.24 +0.9
235,020 - BACOVA_01805 0.24 -0.7
235,043 + BACOVA_01805 0.27 +0.9
235,044 - BACOVA_01805 0.27 +1.7
235,057 + BACOVA_01805 0.28 +1.0
235,057 + BACOVA_01805 0.28 +1.3
235,058 - BACOVA_01805 0.28 -0.6
235,058 - BACOVA_01805 0.28 -1.2
235,058 - BACOVA_01805 0.28 +2.2
235,070 + BACOVA_01805 0.29 -1.8
235,070 + BACOVA_01805 0.29 +0.6
235,135 - BACOVA_01805 0.35 +0.7
235,135 - BACOVA_01805 0.35 -0.5
235,212 + BACOVA_01805 0.42 -1.2
235,212 + BACOVA_01805 0.42 -0.4
235,226 + BACOVA_01805 0.44 +1.9
235,227 - BACOVA_01805 0.44 -2.3
235,293 + BACOVA_01805 0.50 +0.6
235,344 - BACOVA_01805 0.55 +0.3
235,344 - BACOVA_01805 0.55 +0.0
235,364 + BACOVA_01805 0.56 -0.4
235,400 - BACOVA_01805 0.60 -1.0
235,406 + BACOVA_01805 0.60 +0.0
235,408 + BACOVA_01805 0.61 +2.4
235,409 - BACOVA_01805 0.61 -1.0
235,433 + BACOVA_01805 0.63 -2.1
235,434 - BACOVA_01805 0.63 +0.0
235,502 + BACOVA_01805 0.69 -2.3
235,518 + BACOVA_01805 0.71 +3.9
235,519 - BACOVA_01805 0.71 -0.1
235,565 + BACOVA_01805 0.75 +1.2
235,566 - BACOVA_01805 0.75 +2.7
235,594 - BACOVA_01805 0.78 -1.4
235,595 + BACOVA_01805 0.78 -1.9
235,595 + BACOVA_01805 0.78 +0.0
235,596 - BACOVA_01805 0.78 -0.7
235,611 - BACOVA_01805 0.80 -2.0
235,672 - BACOVA_01805 0.85 -0.1
235,672 - BACOVA_01805 0.85 +0.7
235,759 + -1.2
235,760 - -0.9
235,762 + +0.1
235,762 + -0.7
235,762 + +1.6
235,763 - +0.9
235,763 - -0.5
235,765 - +0.7
235,768 - +1.3
235,801 - -1.6
235,812 + -0.6
235,817 + -0.3
235,817 + +0.0
235,824 + -1.2
235,825 - -0.7
235,829 + -1.7
235,830 - +1.0
235,866 + +1.8
235,866 + -1.5
235,867 - +0.0
235,877 + -2.4
235,912 + +3.4
235,956 - BACOVA_01806 0.10 +0.1
235,977 - BACOVA_01806 0.12 -0.4
236,057 + BACOVA_01806 0.19 -1.0
236,060 - BACOVA_01806 0.19 -1.0
236,061 + BACOVA_01806 0.19 +0.3
236,061 + BACOVA_01806 0.19 -0.7
236,062 - BACOVA_01806 0.19 -0.9
236,067 - BACOVA_01806 0.20 +1.0
236,084 - BACOVA_01806 0.21 +0.1
236,092 - BACOVA_01806 0.22 +2.2
236,104 + BACOVA_01806 0.23 -0.9
236,107 - BACOVA_01806 0.23 +1.9
236,113 - BACOVA_01806 0.23 -0.8
236,126 + BACOVA_01806 0.24 -1.7
236,149 + BACOVA_01806 0.26 -0.7
236,216 - BACOVA_01806 0.32 -0.9
236,222 + BACOVA_01806 0.33 -2.0
236,253 + BACOVA_01806 0.35 -0.7
236,276 + BACOVA_01806 0.37 +1.0
236,314 + BACOVA_01806 0.40 -1.9
236,315 - BACOVA_01806 0.40 +2.5
236,316 + BACOVA_01806 0.40 +0.0
236,321 + BACOVA_01806 0.41 -2.3
236,368 + BACOVA_01806 0.45 -0.2
236,368 + BACOVA_01806 0.45 -0.4
236,374 + BACOVA_01806 0.45 +1.4
236,374 + BACOVA_01806 0.45 -1.7
236,374 + BACOVA_01806 0.45 -1.2
236,375 - BACOVA_01806 0.45 +0.5
236,375 - BACOVA_01806 0.45 -1.7
236,375 - BACOVA_01806 0.45 -1.0
236,399 - BACOVA_01806 0.47 +0.0
236,433 - BACOVA_01806 0.50 -1.0
236,465 - BACOVA_01806 0.53 +1.7
236,499 + BACOVA_01806 0.56 +1.9
236,515 - BACOVA_01806 0.57 -1.4
236,515 - BACOVA_01806 0.57 +0.6
236,515 - BACOVA_01806 0.57 +0.0
236,528 - BACOVA_01806 0.58 +0.2
236,596 + BACOVA_01806 0.64 -0.4
236,631 + BACOVA_01806 0.67 +1.0
236,655 - BACOVA_01806 0.69 +0.4
236,655 - BACOVA_01806 0.69 +1.3
236,665 + BACOVA_01806 0.70 +1.7
236,690 + BACOVA_01806 0.72 +0.1
236,690 + BACOVA_01806 0.72 +5.4
236,768 - BACOVA_01806 0.79 -0.8
236,768 - BACOVA_01806 0.79 -2.1
236,772 + BACOVA_01806 0.79 -0.4
236,772 + BACOVA_01806 0.79 +0.6
236,794 + BACOVA_01806 0.81 +0.9
236,794 + BACOVA_01806 0.81 +2.9
236,795 - BACOVA_01806 0.81 -1.1
236,795 - BACOVA_01806 0.81 +0.6
236,795 - BACOVA_01806 0.81 +0.0
236,796 + BACOVA_01806 0.81 -2.1
236,797 - BACOVA_01806 0.81 -1.2
236,797 - BACOVA_01806 0.81 -0.2
236,797 - BACOVA_01806 0.81 +0.3
236,798 + BACOVA_01806 0.81 +2.2
236,807 - BACOVA_01806 0.82 +0.0
236,822 + BACOVA_01806 0.83 +1.0
236,823 - BACOVA_01806 0.83 +1.0
236,894 + BACOVA_01806 0.89 -0.1
236,894 + BACOVA_01806 0.89 +0.2
236,895 - BACOVA_01806 0.89 +1.1
236,897 + BACOVA_01806 0.89 -0.4
236,898 - BACOVA_01806 0.89 -0.6
236,960 + -2.5
236,963 - -1.1
236,970 - -2.9
236,975 - -1.2
237,022 + +3.4
237,022 + +0.0
237,052 - +2.5
237,059 - +0.0
237,059 - +3.2
237,063 - +2.0
237,068 + -3.2
237,079 + -1.9
237,080 - +1.4
237,124 - -0.1
237,148 - +2.1
237,178 - +1.6
237,203 - BACOVA_01807 0.11 +1.0
237,209 + BACOVA_01807 0.11 -1.2
237,224 - BACOVA_01807 0.13 -1.7
237,244 - BACOVA_01807 0.14 -0.5
237,244 - BACOVA_01807 0.14 +1.0
237,244 - BACOVA_01807 0.14 -1.7
237,252 + BACOVA_01807 0.15 -0.9
237,252 + BACOVA_01807 0.15 +0.1
237,277 + BACOVA_01807 0.17 +0.2
237,383 + BACOVA_01807 0.25 -0.9
237,418 + BACOVA_01807 0.28 -1.4
237,463 + BACOVA_01807 0.32 +0.6
237,498 + BACOVA_01807 0.34 -0.1
237,499 - BACOVA_01807 0.35 +0.6
237,499 - BACOVA_01807 0.35 -0.2
237,546 + BACOVA_01807 0.38 -1.7
237,546 + BACOVA_01807 0.38 -1.2
237,546 + BACOVA_01807 0.38 +2.2
237,547 - BACOVA_01807 0.38 +0.7
237,547 - BACOVA_01807 0.38 +2.5
237,547 - BACOVA_01807 0.38 +2.1
237,547 - BACOVA_01807 0.38 -1.4
237,547 - BACOVA_01807 0.38 -1.2
237,547 - BACOVA_01807 0.38 -0.2
237,547 - BACOVA_01807 0.38 -1.4
237,549 - BACOVA_01807 0.39 -3.1
237,560 - BACOVA_01807 0.39 -0.7
237,580 + BACOVA_01807 0.41 -0.9
237,581 - BACOVA_01807 0.41 +4.8
237,581 - BACOVA_01807 0.41 +1.2
237,670 + BACOVA_01807 0.48 +0.6
237,671 - BACOVA_01807 0.48 -0.6
237,720 - BACOVA_01807 0.52 +0.8
237,806 - BACOVA_01807 0.59 -0.7
237,811 - BACOVA_01807 0.59 +0.0
237,848 + BACOVA_01807 0.62 +3.0
237,848 + BACOVA_01807 0.62 -2.9
237,849 - BACOVA_01807 0.63 -1.7
237,871 + BACOVA_01807 0.64 -0.7
237,877 - BACOVA_01807 0.65 -2.4
237,877 - BACOVA_01807 0.65 +0.0
237,877 - BACOVA_01807 0.65 -0.7
237,890 + BACOVA_01807 0.66 -0.7
237,890 + BACOVA_01807 0.66 -0.3
237,891 - BACOVA_01807 0.66 -1.0
237,891 - BACOVA_01807 0.66 -3.4
237,892 + BACOVA_01807 0.66 -0.7
237,968 + BACOVA_01807 0.72 -1.2
237,969 - BACOVA_01807 0.72 -1.7
237,993 - BACOVA_01807 0.74 +0.8
237,997 + BACOVA_01807 0.74 -0.4
237,997 + BACOVA_01807 0.74 -1.1

Or see this region's nucleotide sequence