Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00208

Experiment: Hyaluronic from Streptococcus equi 2.5 mg/ml (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_00206 and BACOVA_00207 are separated by 83 nucleotidesBACOVA_00207 and BACOVA_00208 are separated by 109 nucleotidesBACOVA_00208 and BACOVA_00209 are separated by 47 nucleotidesBACOVA_00209 and BACOVA_00210 overlap by 1 nucleotides BACOVA_00206: BACOVA_00206 - hypothetical protein, at 21,799 to 23,373 _00206 BACOVA_00207: BACOVA_00207 - metallo-beta-lactamase domain protein, at 23,457 to 24,116 _00207 BACOVA_00208: BACOVA_00208 - UDP-N-acetylmuramate dehydrogenase, at 24,226 to 25,218 _00208 BACOVA_00209: BACOVA_00209 - hypothetical protein, at 25,266 to 26,114 _00209 BACOVA_00210: BACOVA_00210 - NAD dependent epimerase/dehydratase family protein, at 26,114 to 27,067 _00210 Position (kb) 24 25 26Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 23.327 kb on - strandat 23.357 kb on - strandat 23.464 kb on + strandat 23.465 kb on - strandat 23.465 kb on - strandat 23.468 kb on + strandat 23.468 kb on + strandat 23.469 kb on - strandat 23.538 kb on - strand, within BACOVA_00207at 23.538 kb on - strand, within BACOVA_00207at 23.553 kb on + strand, within BACOVA_00207at 23.553 kb on + strand, within BACOVA_00207at 23.553 kb on + strand, within BACOVA_00207at 23.554 kb on - strand, within BACOVA_00207at 23.555 kb on + strand, within BACOVA_00207at 23.556 kb on - strand, within BACOVA_00207at 23.561 kb on - strand, within BACOVA_00207at 23.621 kb on + strand, within BACOVA_00207at 23.622 kb on - strand, within BACOVA_00207at 23.622 kb on - strand, within BACOVA_00207at 23.664 kb on + strand, within BACOVA_00207at 23.684 kb on - strand, within BACOVA_00207at 23.708 kb on + strand, within BACOVA_00207at 23.717 kb on + strand, within BACOVA_00207at 23.720 kb on - strand, within BACOVA_00207at 23.724 kb on + strand, within BACOVA_00207at 23.724 kb on + strand, within BACOVA_00207at 23.775 kb on + strand, within BACOVA_00207at 23.776 kb on - strand, within BACOVA_00207at 23.923 kb on + strand, within BACOVA_00207at 24.000 kb on - strand, within BACOVA_00207at 24.015 kb on + strand, within BACOVA_00207at 24.101 kb on + strandat 24.102 kb on - strandat 24.220 kb on + strandat 25.233 kb on - strandat 25.238 kb on - strandat 25.238 kb on - strandat 25.240 kb on - strandat 25.246 kb on - strandat 25.246 kb on - strandat 25.246 kb on - strandat 25.278 kb on - strandat 25.278 kb on - strandat 25.278 kb on - strandat 25.292 kb on - strandat 25.410 kb on - strand, within BACOVA_00209at 25.413 kb on - strand, within BACOVA_00209at 25.416 kb on - strand, within BACOVA_00209at 25.438 kb on - strand, within BACOVA_00209at 25.516 kb on - strand, within BACOVA_00209at 25.602 kb on - strand, within BACOVA_00209at 25.602 kb on - strand, within BACOVA_00209at 25.659 kb on - strand, within BACOVA_00209at 25.779 kb on - strand, within BACOVA_00209at 25.779 kb on - strand, within BACOVA_00209at 25.779 kb on - strand, within BACOVA_00209at 25.781 kb on - strand, within BACOVA_00209at 25.781 kb on - strand, within BACOVA_00209at 25.948 kb on - strand, within BACOVA_00209at 25.950 kb on - strand, within BACOVA_00209at 25.974 kb on - strand, within BACOVA_00209at 25.996 kb on - strand, within BACOVA_00209at 26.022 kb on - strand, within BACOVA_00209at 26.025 kb on - strand, within BACOVA_00209at 26.028 kb on - strand, within BACOVA_00209at 26.046 kb on - strandat 26.046 kb on - strandat 26.089 kb on - strandat 26.104 kb on - strandat 26.210 kb on - strand, within BACOVA_00210at 26.210 kb on - strand, within BACOVA_00210at 26.210 kb on - strand, within BACOVA_00210

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Per-strain Table

Position Strand Gene LocusTag Fraction Hyaluronic from Streptococcus equi 2.5 mg/ml (C)
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23,327 - -1.4
23,357 - +2.6
23,464 + +0.9
23,465 - -1.8
23,465 - -1.3
23,468 + +0.6
23,468 + +0.2
23,469 - +2.3
23,538 - BACOVA_00207 0.12 -3.0
23,538 - BACOVA_00207 0.12 +0.9
23,553 + BACOVA_00207 0.15 +0.2
23,553 + BACOVA_00207 0.15 -0.4
23,553 + BACOVA_00207 0.15 +3.3
23,554 - BACOVA_00207 0.15 +1.3
23,555 + BACOVA_00207 0.15 +3.1
23,556 - BACOVA_00207 0.15 -0.8
23,561 - BACOVA_00207 0.16 -0.8
23,621 + BACOVA_00207 0.25 -2.1
23,622 - BACOVA_00207 0.25 +0.9
23,622 - BACOVA_00207 0.25 +1.6
23,664 + BACOVA_00207 0.31 -0.3
23,684 - BACOVA_00207 0.34 +0.5
23,708 + BACOVA_00207 0.38 +0.9
23,717 + BACOVA_00207 0.39 -0.3
23,720 - BACOVA_00207 0.40 -1.4
23,724 + BACOVA_00207 0.40 -2.0
23,724 + BACOVA_00207 0.40 +1.1
23,775 + BACOVA_00207 0.48 +0.3
23,776 - BACOVA_00207 0.48 -1.3
23,923 + BACOVA_00207 0.71 +0.6
24,000 - BACOVA_00207 0.82 +1.2
24,015 + BACOVA_00207 0.85 +1.8
24,101 + +0.2
24,102 - +3.2
24,220 + -1.7
25,233 - -1.8
25,238 - +1.1
25,238 - -1.3
25,240 - -1.4
25,246 - -2.2
25,246 - -2.1
25,246 - +0.2
25,278 - +0.6
25,278 - +2.1
25,278 - -0.4
25,292 - -0.1
25,410 - BACOVA_00209 0.17 +1.9
25,413 - BACOVA_00209 0.17 -1.6
25,416 - BACOVA_00209 0.18 -2.5
25,438 - BACOVA_00209 0.20 +0.6
25,516 - BACOVA_00209 0.29 -2.4
25,602 - BACOVA_00209 0.40 -2.8
25,602 - BACOVA_00209 0.40 -1.9
25,659 - BACOVA_00209 0.46 -1.7
25,779 - BACOVA_00209 0.60 -1.3
25,779 - BACOVA_00209 0.60 +0.6
25,779 - BACOVA_00209 0.60 +0.6
25,781 - BACOVA_00209 0.61 +0.1
25,781 - BACOVA_00209 0.61 -1.7
25,948 - BACOVA_00209 0.80 +0.8
25,950 - BACOVA_00209 0.81 -0.4
25,974 - BACOVA_00209 0.83 +0.3
25,996 - BACOVA_00209 0.86 +0.6
26,022 - BACOVA_00209 0.89 +0.2
26,025 - BACOVA_00209 0.89 +1.6
26,028 - BACOVA_00209 0.90 +0.1
26,046 - -0.4
26,046 - +0.4
26,089 - -0.0
26,104 - -0.3
26,210 - BACOVA_00210 0.10 -1.9
26,210 - BACOVA_00210 0.10 +0.5
26,210 - BACOVA_00210 0.10 +1.6

Or see this region's nucleotide sequence