Strain Fitness in Erwinia amylovora T8 around OLJFJH_11400

Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-8
2,375,490	-				+0.4
2,375,522	+				+0.3
2,375,625	-				-0.2
2,375,718	+				-1.3
2,375,719	-				-0.8
2,375,719	-				-0.0
2,375,726	+				+0.1
2,375,828	-				+0.8
2,375,894	-		OLJFJH_11395	0.11	+0.3
2,376,067	-		OLJFJH_11395	0.40	-0.1
2,376,076	+		OLJFJH_11395	0.42	+0.2
2,376,169	+		OLJFJH_11395	0.57	-0.6
2,376,169	+		OLJFJH_11395	0.57	-0.7
2,376,170	-		OLJFJH_11395	0.58	+0.5
2,376,173	-		OLJFJH_11395	0.58	+0.1
2,376,223	+		OLJFJH_11395	0.66	+0.3
2,376,521	+				+0.1
2,376,703	+		OLJFJH_11400	0.18	+0.1
2,376,703	+		OLJFJH_11400	0.18	+0.3
2,376,704	-		OLJFJH_11400	0.18	+0.7
2,376,704	-		OLJFJH_11400	0.18	-0.9
2,376,704	-		OLJFJH_11400	0.18	-0.0
2,376,781	+		OLJFJH_11400	0.24	-0.3
2,376,781	+		OLJFJH_11400	0.24	+0.9
2,376,782	-		OLJFJH_11400	0.25	-0.1
2,376,861	+		OLJFJH_11400	0.31	-0.2
2,376,908	+		OLJFJH_11400	0.35	+2.3
2,376,929	+		OLJFJH_11400	0.37	-0.1
2,376,929	+		OLJFJH_11400	0.37	-0.7
2,376,929	+		OLJFJH_11400	0.37	-0.9
2,376,929	+		OLJFJH_11400	0.37	+0.3
2,376,942	+		OLJFJH_11400	0.38	-0.3
2,376,942	+		OLJFJH_11400	0.38	+1.7
2,376,943	-		OLJFJH_11400	0.38	+0.1
2,377,058	-		OLJFJH_11400	0.47	+0.9
2,377,101	-		OLJFJH_11400	0.51	+0.9
2,377,148	-		OLJFJH_11400	0.55	-0.4
2,377,186	-		OLJFJH_11400	0.58	-0.1
2,377,264	+		OLJFJH_11400	0.64	+1.8
2,377,265	-		OLJFJH_11400	0.64	-0.4
2,377,405	+		OLJFJH_11400	0.76	+0.4
2,377,405	+		OLJFJH_11400	0.76	+0.4
2,377,405	+		OLJFJH_11400	0.76	+0.0
2,377,405	+		OLJFJH_11400	0.76	+1.5
2,377,405	+		OLJFJH_11400	0.76	+1.7
2,377,405	+		OLJFJH_11400	0.76	-0.2
2,377,405	+		OLJFJH_11400	0.76	+0.7
2,377,405	+		OLJFJH_11400	0.76	+2.0
2,377,405	+		OLJFJH_11400	0.76	-0.2
2,377,405	+		OLJFJH_11400	0.76	-0.7
2,377,405	+		OLJFJH_11400	0.76	+0.7
2,377,405	+		OLJFJH_11400	0.76	+0.1
2,377,405	+		OLJFJH_11400	0.76	+0.7
2,377,405	+		OLJFJH_11400	0.76	+1.3
2,377,405	+		OLJFJH_11400	0.76	+1.3
2,377,405	+		OLJFJH_11400	0.76	+1.2
2,377,405	+		OLJFJH_11400	0.76	+0.7
2,377,405	+		OLJFJH_11400	0.76	+1.5
2,377,406	-		OLJFJH_11400	0.76	-0.5
2,377,406	-		OLJFJH_11400	0.76	+0.1
2,377,406	-		OLJFJH_11400	0.76	+0.4
2,377,406	-		OLJFJH_11400	0.76	+0.1
2,377,406	-		OLJFJH_11400	0.76	+0.3
2,377,406	-		OLJFJH_11400	0.76	+0.3
2,377,406	-		OLJFJH_11400	0.76	+0.5
2,377,406	-		OLJFJH_11400	0.76	+0.6
2,377,406	-		OLJFJH_11400	0.76	+0.5
2,377,406	-		OLJFJH_11400	0.76	-0.2
2,377,406	-		OLJFJH_11400	0.76	-0.4
2,377,406	-		OLJFJH_11400	0.76	-0.0
2,377,406	-		OLJFJH_11400	0.76	+3.2
2,377,406	-		OLJFJH_11400	0.76	-0.7
2,377,409	+		OLJFJH_11400	0.76	+0.4
2,377,410	-		OLJFJH_11400	0.76	-0.5
2,377,447	+		OLJFJH_11400	0.79	-0.1
2,377,448	-		OLJFJH_11400	0.79	-1.2
2,377,478	-		OLJFJH_11400	0.82	-0.2
2,377,499	-		OLJFJH_11400	0.83	+1.8
2,377,592	+				+0.0
2,377,592	+				+1.2
2,377,592	+				+3.3
2,377,592	+				+3.4
2,377,596	+				+2.0
2,377,597	-				-0.2
2,377,602	-				+0.2
2,377,604	+				+5.5
2,377,604	+				+0.9
2,377,604	+				+1.3
2,377,636	-				-0.0
2,377,713	+				+0.7
2,377,762	+				+2.1
2,377,763	-				-0.1
2,377,763	-				-0.7
2,377,763	-				+0.4
2,377,763	-				+0.2
2,377,810	+				+3.3
2,377,842	+				+2.4
2,377,920	+				+0.6
2,377,920	+				+4.4
2,378,006	-				-0.0
2,378,190	-				+0.3
2,378,352	-				+1.0
2,378,375	-				-0.9
2,378,402	+				+2.2
2,378,421	+				+1.4
2,378,454	+				+1.7
2,378,558	+				+2.0