Strain Fitness in Erwinia amylovora T8 around OLJFJH_06110

Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-8
1,231,268	+		OLJFJH_06105	0.24	-3.7
1,231,268	+		OLJFJH_06105	0.24	-4.2
1,231,269	-		OLJFJH_06105	0.24	-3.1
1,231,272	-		OLJFJH_06105	0.24	-3.8
1,231,281	-		OLJFJH_06105	0.25	-2.0
1,231,281	-		OLJFJH_06105	0.25	-3.0
1,231,281	-		OLJFJH_06105	0.25	-0.8
1,231,348	+		OLJFJH_06105	0.33	-2.1
1,231,348	+		OLJFJH_06105	0.33	-3.4
1,231,349	-		OLJFJH_06105	0.33	-0.5
1,231,352	+		OLJFJH_06105	0.33	-3.4
1,231,353	-		OLJFJH_06105	0.33	-2.7
1,231,353	-		OLJFJH_06105	0.33	-2.1
1,231,382	+		OLJFJH_06105	0.36	-1.2
1,231,382	+		OLJFJH_06105	0.36	-2.8
1,231,491	-		OLJFJH_06105	0.48	-3.0
1,231,559	+		OLJFJH_06105	0.56	-3.3
1,231,559	+		OLJFJH_06105	0.56	-0.8
1,231,560	-		OLJFJH_06105	0.56	-3.5
1,231,565	+		OLJFJH_06105	0.57	-3.4
1,231,566	-		OLJFJH_06105	0.57	-3.9
1,231,566	-		OLJFJH_06105	0.57	-3.9
1,231,566	-		OLJFJH_06105	0.57	-1.6
1,231,566	-		OLJFJH_06105	0.57	-3.8
1,231,593	-		OLJFJH_06105	0.60	-3.3
1,231,624	-		OLJFJH_06105	0.63	-3.9
1,231,728	-		OLJFJH_06105	0.75	-1.0
1,231,878	-				-3.3
1,231,897	+				-2.8
1,231,897	+				-3.9
1,231,898	-				-2.5
1,231,898	-				-3.8
1,231,898	-				-2.9
1,231,902	+				-3.3
1,231,902	+				-3.6
1,231,902	+				-3.5
1,231,902	+				-1.8
1,231,903	-				-3.4
1,231,916	+				-4.2
1,231,916	+				-2.5
1,231,917	-				-2.3
1,231,917	-				-2.7
1,232,011	-				-0.3
1,232,022	+				-0.1
1,232,022	+				+0.1
1,232,022	+				-0.0
1,232,022	+				-0.1
1,232,022	+				-0.4
1,232,023	-				-0.6
1,232,023	-				-0.8
1,232,026	-				+1.7
1,232,080	+				-0.5
1,232,082	+				+0.7
1,232,083	-				+0.4
1,232,083	-				+0.4
1,232,125	-				-0.5
1,232,125	-				+0.0
1,232,125	-				-0.2
1,232,133	+				-0.8
1,232,133	+				-0.2
1,232,133	+				-0.7
1,232,287	+				-0.7
1,232,287	+				-0.0
1,232,287	+				-1.0
1,232,378	+				+0.2
1,232,404	+				-0.0
1,232,405	-				-0.1
1,232,508	-				-0.3
1,232,508	-				-0.9
1,232,556	+		OLJFJH_06110	0.12	-0.3
1,232,559	+		OLJFJH_06110	0.12	-0.7
1,232,559	+		OLJFJH_06110	0.12	+0.0
1,232,765	+		OLJFJH_06110	0.19	-0.1
1,232,859	+		OLJFJH_06110	0.23	-1.9
1,232,860	-		OLJFJH_06110	0.23	-0.4
1,232,889	+		OLJFJH_06110	0.24	-0.1
1,232,898	+		OLJFJH_06110	0.24	+0.0
1,232,898	+		OLJFJH_06110	0.24	+0.0
1,232,899	-		OLJFJH_06110	0.25	+2.9
1,232,933	-		OLJFJH_06110	0.26	+0.3
1,233,039	+		OLJFJH_06110	0.30	+1.1
1,233,351	-		OLJFJH_06110	0.42	+0.6
1,233,364	+		OLJFJH_06110	0.42	-0.1
1,233,364	+		OLJFJH_06110	0.42	-0.4
1,233,481	+		OLJFJH_06110	0.46	+0.1
1,233,482	-		OLJFJH_06110	0.46	-0.3
1,233,486	+		OLJFJH_06110	0.47	+0.5
1,233,486	+		OLJFJH_06110	0.47	+0.6
1,233,487	-		OLJFJH_06110	0.47	-0.5
1,233,487	-		OLJFJH_06110	0.47	+0.1
1,233,487	-		OLJFJH_06110	0.47	+0.4
1,233,823	-		OLJFJH_06110	0.59	+0.6
1,233,830	-		OLJFJH_06110	0.60	+0.5
1,233,831	+		OLJFJH_06110	0.60	+0.9
1,233,831	+		OLJFJH_06110	0.60	-0.3
1,233,831	+		OLJFJH_06110	0.60	-0.1
1,233,832	-		OLJFJH_06110	0.60	+0.0
1,233,832	-		OLJFJH_06110	0.60	-1.5
1,233,832	-		OLJFJH_06110	0.60	+0.5
1,233,832	-		OLJFJH_06110	0.60	+0.6
1,233,915	+		OLJFJH_06110	0.63	-0.1
1,233,915	+		OLJFJH_06110	0.63	-0.5
1,233,916	-		OLJFJH_06110	0.63	-0.3
1,234,165	+		OLJFJH_06110	0.72	-0.2
1,234,325	-		OLJFJH_06110	0.78	+0.2
1,234,395	+		OLJFJH_06110	0.81	+0.4
1,234,396	-		OLJFJH_06110	0.81	+1.0
1,234,638	+				-0.9
1,234,639	-				-0.5
1,234,862	-				+0.4
1,234,888	-				-0.4
1,234,901	-				-0.2
1,234,928	+				-0.5
1,234,929	-				-0.3
1,234,963	-				+0.0
1,234,963	-				+0.9
1,234,970	+				+0.2
1,234,971	-				+1.4
1,234,999	-				-0.2
1,235,005	+				-0.1
1,235,060	+				+1.1
1,235,083	-				+0.0
1,235,112	+				-0.5
1,235,138	+				-0.3
1,235,138	+				-0.1
1,235,138	+				+0.2
1,235,138	+				-0.8
1,235,138	+				+3.5
1,235,138	+				-0.2
1,235,139	-				-0.2
1,235,174	-				-1.2
1,235,174	-				-3.4
1,235,300	+		OLJFJH_06115	0.14	-3.9
1,235,300	+		OLJFJH_06115	0.14	-3.5
1,235,301	-		OLJFJH_06115	0.14	-3.5
1,235,301	-		OLJFJH_06115	0.14	-3.8
1,235,301	-		OLJFJH_06115	0.14	-1.2
1,235,502	+		OLJFJH_06115	0.32	-3.5
1,235,508	+		OLJFJH_06115	0.32	-1.7
1,235,508	+		OLJFJH_06115	0.32	-4.0
1,235,532	+		OLJFJH_06115	0.34	-0.5
1,235,743	-		OLJFJH_06115	0.53	-1.9
1,235,743	-		OLJFJH_06115	0.53	-2.5
1,235,751	+		OLJFJH_06115	0.53	-0.8
1,235,752	-		OLJFJH_06115	0.53	-1.8
1,235,879	+		OLJFJH_06115	0.64	-3.6
1,235,879	+		OLJFJH_06115	0.64	-1.4
1,235,880	-		OLJFJH_06115	0.64	-6.1
1,235,880	-		OLJFJH_06115	0.64	-2.4