Experiment: Dextran, Mw ~200,000 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_05231 and BACOVA_05232 are separated by 462 nucleotides BACOVA_05232 and BACOVA_05233 are separated by 59 nucleotides BACOVA_05233 and BACOVA_05234 are separated by 160 nucleotides
BACOVA_05231: BACOVA_05231 - putative DNA polymerase IV, at 730,476 to 731,567
_05231
BACOVA_05232: BACOVA_05232 - hypothetical protein, at 732,030 to 733,979
_05232
BACOVA_05233: BACOVA_05233 - hypothetical protein, at 734,039 to 734,740
_05233
BACOVA_05234: BACOVA_05234 - papain family cysteine protease, at 734,901 to 736,079
_05234
Position (kb) 732
733
734 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 731.059 kb on + strand, within BACOVA_05231 at 731.060 kb on - strand, within BACOVA_05231 at 731.060 kb on - strand, within BACOVA_05231 at 731.142 kb on + strand, within BACOVA_05231 at 731.142 kb on + strand, within BACOVA_05231 at 731.145 kb on + strand, within BACOVA_05231 at 731.146 kb on - strand, within BACOVA_05231 at 731.146 kb on - strand, within BACOVA_05231 at 731.199 kb on - strand, within BACOVA_05231 at 731.267 kb on - strand, within BACOVA_05231 at 731.268 kb on + strand, within BACOVA_05231 at 731.269 kb on - strand, within BACOVA_05231 at 731.269 kb on - strand, within BACOVA_05231 at 731.269 kb on - strand, within BACOVA_05231 at 731.404 kb on + strand, within BACOVA_05231 at 731.405 kb on - strand, within BACOVA_05231 at 731.438 kb on + strand, within BACOVA_05231 at 731.672 kb on - strand at 731.700 kb on - strand at 731.700 kb on - strand at 731.709 kb on - strand at 731.713 kb on + strand at 731.714 kb on - strand at 731.714 kb on - strand at 731.714 kb on - strand at 731.722 kb on + strand at 731.758 kb on - strand at 731.766 kb on + strand at 731.847 kb on - strand at 731.857 kb on + strand at 731.858 kb on - strand at 731.867 kb on + strand at 731.868 kb on - strand at 731.878 kb on + strand at 731.879 kb on - strand at 731.899 kb on + strand at 731.899 kb on + strand at 731.910 kb on - strand at 731.931 kb on + strand at 731.932 kb on - strand at 731.951 kb on + strand at 731.952 kb on - strand at 731.952 kb on - strand at 731.977 kb on + strand at 731.985 kb on - strand at 732.027 kb on + strand at 732.028 kb on - strand at 732.028 kb on - strand at 732.028 kb on - strand at 732.064 kb on + strand at 732.120 kb on + strand at 732.135 kb on - strand at 732.205 kb on - strand at 732.213 kb on + strand at 732.214 kb on - strand at 732.215 kb on + strand at 732.216 kb on - strand at 732.216 kb on - strand at 732.255 kb on - strand, within BACOVA_05232 at 732.297 kb on - strand, within BACOVA_05232 at 732.297 kb on - strand, within BACOVA_05232 at 732.297 kb on - strand, within BACOVA_05232 at 732.297 kb on - strand, within BACOVA_05232 at 732.297 kb on - strand, within BACOVA_05232 at 732.297 kb on - strand, within BACOVA_05232 at 732.440 kb on + strand, within BACOVA_05232 at 732.440 kb on + strand, within BACOVA_05232 at 732.451 kb on + strand, within BACOVA_05232 at 732.452 kb on - strand, within BACOVA_05232 at 732.465 kb on + strand, within BACOVA_05232 at 732.465 kb on + strand, within BACOVA_05232 at 732.468 kb on - strand, within BACOVA_05232 at 732.468 kb on - strand, within BACOVA_05232 at 732.496 kb on + strand, within BACOVA_05232 at 732.497 kb on - strand, within BACOVA_05232 at 732.497 kb on - strand, within BACOVA_05232 at 732.522 kb on - strand, within BACOVA_05232 at 732.589 kb on + strand, within BACOVA_05232 at 732.601 kb on + strand, within BACOVA_05232 at 732.646 kb on + strand, within BACOVA_05232 at 732.646 kb on + strand, within BACOVA_05232 at 732.693 kb on + strand, within BACOVA_05232 at 732.693 kb on + strand, within BACOVA_05232 at 732.729 kb on - strand, within BACOVA_05232 at 732.773 kb on + strand, within BACOVA_05232 at 732.816 kb on - strand, within BACOVA_05232 at 732.816 kb on - strand, within BACOVA_05232 at 732.821 kb on + strand, within BACOVA_05232 at 732.821 kb on + strand, within BACOVA_05232 at 732.821 kb on + strand, within BACOVA_05232 at 732.822 kb on - strand, within BACOVA_05232 at 732.822 kb on - strand, within BACOVA_05232 at 732.863 kb on + strand, within BACOVA_05232 at 732.942 kb on + strand, within BACOVA_05232 at 732.943 kb on - strand, within BACOVA_05232 at 733.026 kb on + strand, within BACOVA_05232 at 733.026 kb on + strand, within BACOVA_05232 at 733.027 kb on - strand, within BACOVA_05232 at 733.027 kb on - strand, within BACOVA_05232 at 733.029 kb on - strand, within BACOVA_05232 at 733.029 kb on - strand, within BACOVA_05232 at 733.029 kb on - strand, within BACOVA_05232 at 733.029 kb on - strand, within BACOVA_05232 at 733.042 kb on - strand, within BACOVA_05232 at 733.193 kb on + strand, within BACOVA_05232 at 733.194 kb on - strand, within BACOVA_05232 at 733.231 kb on + strand, within BACOVA_05232 at 733.241 kb on + strand, within BACOVA_05232 at 733.315 kb on - strand, within BACOVA_05232 at 733.315 kb on - strand, within BACOVA_05232 at 733.317 kb on - strand, within BACOVA_05232 at 733.338 kb on + strand, within BACOVA_05232 at 733.377 kb on - strand, within BACOVA_05232 at 733.391 kb on - strand, within BACOVA_05232 at 733.407 kb on + strand, within BACOVA_05232 at 733.408 kb on - strand, within BACOVA_05232 at 733.412 kb on - strand, within BACOVA_05232 at 733.416 kb on - strand, within BACOVA_05232 at 733.431 kb on - strand, within BACOVA_05232 at 733.448 kb on + strand, within BACOVA_05232 at 733.448 kb on + strand, within BACOVA_05232 at 733.449 kb on - strand, within BACOVA_05232 at 733.453 kb on - strand, within BACOVA_05232 at 733.453 kb on - strand, within BACOVA_05232 at 733.454 kb on + strand, within BACOVA_05232 at 733.455 kb on - strand, within BACOVA_05232 at 733.455 kb on - strand, within BACOVA_05232 at 733.509 kb on + strand, within BACOVA_05232 at 733.515 kb on - strand, within BACOVA_05232 at 733.515 kb on - strand, within BACOVA_05232 at 733.560 kb on + strand, within BACOVA_05232 at 733.562 kb on + strand, within BACOVA_05232 at 733.563 kb on - strand, within BACOVA_05232 at 733.563 kb on - strand, within BACOVA_05232 at 733.615 kb on + strand, within BACOVA_05232 at 733.615 kb on + strand, within BACOVA_05232 at 733.615 kb on + strand, within BACOVA_05232 at 733.616 kb on - strand, within BACOVA_05232 at 733.616 kb on - strand, within BACOVA_05232 at 733.616 kb on - strand, within BACOVA_05232 at 733.619 kb on + strand, within BACOVA_05232 at 733.620 kb on - strand, within BACOVA_05232 at 733.665 kb on + strand, within BACOVA_05232 at 733.700 kb on + strand, within BACOVA_05232 at 733.721 kb on + strand, within BACOVA_05232 at 733.722 kb on - strand, within BACOVA_05232 at 733.731 kb on - strand, within BACOVA_05232 at 733.825 kb on - strand at 733.839 kb on - strand at 733.883 kb on + strand at 733.919 kb on - strand at 733.947 kb on - strand at 733.950 kb on + strand at 733.950 kb on + strand at 733.951 kb on - strand at 734.016 kb on - strand at 734.036 kb on - strand at 734.052 kb on + strand at 734.053 kb on - strand at 734.082 kb on + strand at 734.088 kb on + strand at 734.089 kb on - strand at 734.089 kb on - strand at 734.134 kb on - strand, within BACOVA_05233 at 734.140 kb on + strand, within BACOVA_05233 at 734.141 kb on - strand, within BACOVA_05233 at 734.141 kb on - strand, within BACOVA_05233 at 734.209 kb on - strand, within BACOVA_05233 at 734.212 kb on + strand, within BACOVA_05233 at 734.212 kb on + strand, within BACOVA_05233 at 734.216 kb on - strand, within BACOVA_05233 at 734.216 kb on - strand, within BACOVA_05233 at 734.216 kb on - strand, within BACOVA_05233 at 734.302 kb on + strand, within BACOVA_05233 at 734.323 kb on + strand, within BACOVA_05233 at 734.323 kb on + strand, within BACOVA_05233 at 734.347 kb on + strand, within BACOVA_05233 at 734.347 kb on + strand, within BACOVA_05233 at 734.348 kb on - strand, within BACOVA_05233 at 734.348 kb on - strand, within BACOVA_05233 at 734.351 kb on + strand, within BACOVA_05233 at 734.359 kb on + strand, within BACOVA_05233 at 734.367 kb on - strand, within BACOVA_05233 at 734.367 kb on - strand, within BACOVA_05233 at 734.404 kb on - strand, within BACOVA_05233 at 734.404 kb on - strand, within BACOVA_05233 at 734.404 kb on - strand, within BACOVA_05233 at 734.444 kb on - strand, within BACOVA_05233 at 734.448 kb on - strand, within BACOVA_05233 at 734.452 kb on + strand, within BACOVA_05233 at 734.453 kb on - strand, within BACOVA_05233 at 734.551 kb on + strand, within BACOVA_05233 at 734.552 kb on - strand, within BACOVA_05233 at 734.556 kb on + strand, within BACOVA_05233 at 734.556 kb on + strand, within BACOVA_05233 at 734.565 kb on - strand, within BACOVA_05233 at 734.596 kb on + strand, within BACOVA_05233 at 734.599 kb on + strand, within BACOVA_05233 at 734.669 kb on + strand, within BACOVA_05233 at 734.670 kb on - strand at 734.721 kb on + strand at 734.721 kb on + strand at 734.722 kb on - strand at 734.757 kb on + strand at 734.758 kb on - strand at 734.760 kb on - strand at 734.762 kb on + strand at 734.762 kb on + strand at 734.762 kb on + strand at 734.825 kb on - strand at 734.825 kb on - strand at 734.825 kb on - strand at 734.830 kb on + strand at 734.830 kb on + strand at 734.860 kb on - strand at 734.902 kb on + strand at 734.979 kb on + strand at 734.979 kb on + strand at 734.979 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Dextran, Mw ~200,000 2.5 mg/ml (C) remove 731,059 + BACOVA_05231 0.53 -2.0 731,060 - BACOVA_05231 0.53 -0.7 731,060 - BACOVA_05231 0.53 +2.5 731,142 + BACOVA_05231 0.61 -0.2 731,142 + BACOVA_05231 0.61 -1.3 731,145 + BACOVA_05231 0.61 -0.7 731,146 - BACOVA_05231 0.61 -0.9 731,146 - BACOVA_05231 0.61 -0.0 731,199 - BACOVA_05231 0.66 +0.1 731,267 - BACOVA_05231 0.72 +0.3 731,268 + BACOVA_05231 0.73 +1.4 731,269 - BACOVA_05231 0.73 -0.5 731,269 - BACOVA_05231 0.73 -0.3 731,269 - BACOVA_05231 0.73 -0.2 731,404 + BACOVA_05231 0.85 +0.1 731,405 - BACOVA_05231 0.85 +1.4 731,438 + BACOVA_05231 0.88 +0.1 731,672 - -0.9 731,700 - +2.4 731,700 - -0.7 731,709 - +0.0 731,713 + -0.8 731,714 - -0.2 731,714 - +0.8 731,714 - +1.0 731,722 + -0.4 731,758 - +1.4 731,766 + +0.4 731,847 - -0.2 731,857 + -1.2 731,858 - -1.4 731,867 + -1.4 731,868 - +1.4 731,878 + +1.4 731,879 - -0.3 731,899 + -0.3 731,899 + +0.4 731,910 - +0.2 731,931 + -2.4 731,932 - +0.8 731,951 + +2.4 731,952 - -0.2 731,952 - +0.4 731,977 + -0.9 731,985 - -2.0 732,027 + -0.2 732,028 - +2.2 732,028 - -0.4 732,028 - -0.9 732,064 + +0.0 732,120 + +0.6 732,135 - -0.2 732,205 - +0.5 732,213 + -2.5 732,214 - -0.7 732,215 + -0.5 732,216 - +1.1 732,216 - +0.2 732,255 - BACOVA_05232 0.12 -0.6 732,297 - BACOVA_05232 0.14 +1.2 732,297 - BACOVA_05232 0.14 -0.1 732,297 - BACOVA_05232 0.14 -1.2 732,297 - BACOVA_05232 0.14 +0.0 732,297 - BACOVA_05232 0.14 +0.5 732,297 - BACOVA_05232 0.14 -0.8 732,440 + BACOVA_05232 0.21 +2.0 732,440 + BACOVA_05232 0.21 +0.4 732,451 + BACOVA_05232 0.22 -0.9 732,452 - BACOVA_05232 0.22 -0.7 732,465 + BACOVA_05232 0.22 +0.6 732,465 + BACOVA_05232 0.22 -0.6 732,468 - BACOVA_05232 0.22 +0.4 732,468 - BACOVA_05232 0.22 -0.6 732,496 + BACOVA_05232 0.24 -0.9 732,497 - BACOVA_05232 0.24 +1.2 732,497 - BACOVA_05232 0.24 -0.6 732,522 - BACOVA_05232 0.25 +0.6 732,589 + BACOVA_05232 0.29 -1.2 732,601 + BACOVA_05232 0.29 +0.4 732,646 + BACOVA_05232 0.32 -1.9 732,646 + BACOVA_05232 0.32 +0.8 732,693 + BACOVA_05232 0.34 +1.0 732,693 + BACOVA_05232 0.34 -1.2 732,729 - BACOVA_05232 0.36 +0.1 732,773 + BACOVA_05232 0.38 +1.7 732,816 - BACOVA_05232 0.40 -1.4 732,816 - BACOVA_05232 0.40 -0.6 732,821 + BACOVA_05232 0.41 -0.4 732,821 + BACOVA_05232 0.41 +1.7 732,821 + BACOVA_05232 0.41 -0.9 732,822 - BACOVA_05232 0.41 -2.2 732,822 - BACOVA_05232 0.41 -0.1 732,863 + BACOVA_05232 0.43 -1.7 732,942 + BACOVA_05232 0.47 -0.6 732,943 - BACOVA_05232 0.47 +0.1 733,026 + BACOVA_05232 0.51 -0.3 733,026 + BACOVA_05232 0.51 +0.4 733,027 - BACOVA_05232 0.51 -0.5 733,027 - BACOVA_05232 0.51 -0.7 733,029 - BACOVA_05232 0.51 -0.6 733,029 - BACOVA_05232 0.51 +0.7 733,029 - BACOVA_05232 0.51 -1.3 733,029 - BACOVA_05232 0.51 +1.4 733,042 - BACOVA_05232 0.52 +1.3 733,193 + BACOVA_05232 0.60 +1.4 733,194 - BACOVA_05232 0.60 -1.0 733,231 + BACOVA_05232 0.62 -0.0 733,241 + BACOVA_05232 0.62 +0.2 733,315 - BACOVA_05232 0.66 -0.9 733,315 - BACOVA_05232 0.66 +0.2 733,317 - BACOVA_05232 0.66 -0.2 733,338 + BACOVA_05232 0.67 -1.6 733,377 - BACOVA_05232 0.69 -0.5 733,391 - BACOVA_05232 0.70 +0.3 733,407 + BACOVA_05232 0.71 +0.9 733,408 - BACOVA_05232 0.71 -1.2 733,412 - BACOVA_05232 0.71 -0.8 733,416 - BACOVA_05232 0.71 +1.4 733,431 - BACOVA_05232 0.72 -0.4 733,448 + BACOVA_05232 0.73 +0.6 733,448 + BACOVA_05232 0.73 -0.1 733,449 - BACOVA_05232 0.73 -1.2 733,453 - BACOVA_05232 0.73 +1.2 733,453 - BACOVA_05232 0.73 -1.2 733,454 + BACOVA_05232 0.73 -2.4 733,455 - BACOVA_05232 0.73 +1.5 733,455 - BACOVA_05232 0.73 +0.5 733,509 + BACOVA_05232 0.76 +0.6 733,515 - BACOVA_05232 0.76 -1.2 733,515 - BACOVA_05232 0.76 +0.7 733,560 + BACOVA_05232 0.78 -1.4 733,562 + BACOVA_05232 0.79 -1.7 733,563 - BACOVA_05232 0.79 -0.2 733,563 - BACOVA_05232 0.79 +0.6 733,615 + BACOVA_05232 0.81 -0.0 733,615 + BACOVA_05232 0.81 -1.5 733,615 + BACOVA_05232 0.81 -0.5 733,616 - BACOVA_05232 0.81 -1.6 733,616 - BACOVA_05232 0.81 -0.2 733,616 - BACOVA_05232 0.81 +1.2 733,619 + BACOVA_05232 0.81 -2.1 733,620 - BACOVA_05232 0.82 +0.8 733,665 + BACOVA_05232 0.84 +0.4 733,700 + BACOVA_05232 0.86 -0.2 733,721 + BACOVA_05232 0.87 +0.8 733,722 - BACOVA_05232 0.87 +0.4 733,731 - BACOVA_05232 0.87 -0.4 733,825 - -0.6 733,839 - -0.4 733,883 + +1.1 733,919 - +1.4 733,947 - +0.6 733,950 + +0.8 733,950 + -0.2 733,951 - -2.3 734,016 - -0.7 734,036 - +0.7 734,052 + +0.6 734,053 - -0.9 734,082 + +0.0 734,088 + -0.4 734,089 - +0.9 734,089 - +0.8 734,134 - BACOVA_05233 0.14 -0.6 734,140 + BACOVA_05233 0.14 -0.0 734,141 - BACOVA_05233 0.15 -0.4 734,141 - BACOVA_05233 0.15 -2.6 734,209 - BACOVA_05233 0.24 +0.2 734,212 + BACOVA_05233 0.25 -0.9 734,212 + BACOVA_05233 0.25 -1.1 734,216 - BACOVA_05233 0.25 -0.0 734,216 - BACOVA_05233 0.25 +0.0 734,216 - BACOVA_05233 0.25 -1.7 734,302 + BACOVA_05233 0.37 -1.2 734,323 + BACOVA_05233 0.40 -1.4 734,323 + BACOVA_05233 0.40 +1.0 734,347 + BACOVA_05233 0.44 -2.3 734,347 + BACOVA_05233 0.44 -1.6 734,348 - BACOVA_05233 0.44 +1.3 734,348 - BACOVA_05233 0.44 -2.0 734,351 + BACOVA_05233 0.44 +0.9 734,359 + BACOVA_05233 0.46 -0.4 734,367 - BACOVA_05233 0.47 -1.0 734,367 - BACOVA_05233 0.47 +1.4 734,404 - BACOVA_05233 0.52 +0.4 734,404 - BACOVA_05233 0.52 +1.3 734,404 - BACOVA_05233 0.52 -1.9 734,444 - BACOVA_05233 0.58 -0.6 734,448 - BACOVA_05233 0.58 +0.9 734,452 + BACOVA_05233 0.59 +1.1 734,453 - BACOVA_05233 0.59 +0.4 734,551 + BACOVA_05233 0.73 -0.7 734,552 - BACOVA_05233 0.73 -1.1 734,556 + BACOVA_05233 0.74 -0.5 734,556 + BACOVA_05233 0.74 -1.8 734,565 - BACOVA_05233 0.75 +1.6 734,596 + BACOVA_05233 0.79 -2.4 734,599 + BACOVA_05233 0.80 -1.3 734,669 + BACOVA_05233 0.90 -1.6 734,670 - +2.2 734,721 + -0.3 734,721 + -0.4 734,722 - -0.6 734,757 + -0.1 734,758 - +1.4 734,760 - -0.2 734,762 + -0.2 734,762 + -0.6 734,762 + +0.1 734,825 - +0.2 734,825 - -1.5 734,825 - -2.0 734,830 + -0.6 734,830 + +1.4 734,860 - -1.0 734,902 + +3.4 734,979 + -0.2 734,979 + -0.0 734,979 + -0.8
Or see this region's nucleotide sequence