Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_02003

Experiment: Dextran, Mw ~200,000 2.5 mg/ml (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_02002 and BACOVA_02003 are separated by 313 nucleotides BACOVA_02002: BACOVA_02002 - hypothetical protein, at 241,335 to 242,579 _02002 BACOVA_02003: BACOVA_02003 - hypothetical protein, at 242,893 to 243,288 _02003 Position (kb) 242 243 244Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 241.901 kb on + strand, within BACOVA_02002at 241.901 kb on + strand, within BACOVA_02002at 241.901 kb on + strand, within BACOVA_02002at 241.901 kb on + strand, within BACOVA_02002at 241.931 kb on + strand, within BACOVA_02002at 241.936 kb on - strand, within BACOVA_02002at 242.048 kb on + strand, within BACOVA_02002at 242.050 kb on + strand, within BACOVA_02002at 242.054 kb on - strand, within BACOVA_02002at 242.054 kb on - strand, within BACOVA_02002at 242.057 kb on + strand, within BACOVA_02002at 242.064 kb on - strand, within BACOVA_02002at 242.067 kb on + strand, within BACOVA_02002at 242.067 kb on + strand, within BACOVA_02002at 242.068 kb on - strand, within BACOVA_02002at 242.119 kb on - strand, within BACOVA_02002at 242.155 kb on + strand, within BACOVA_02002at 242.239 kb on - strand, within BACOVA_02002at 242.239 kb on - strand, within BACOVA_02002at 242.241 kb on - strand, within BACOVA_02002at 242.311 kb on + strand, within BACOVA_02002at 242.311 kb on + strand, within BACOVA_02002at 242.316 kb on + strand, within BACOVA_02002at 242.347 kb on + strand, within BACOVA_02002at 242.347 kb on + strand, within BACOVA_02002at 242.347 kb on + strand, within BACOVA_02002at 242.347 kb on + strand, within BACOVA_02002at 242.348 kb on - strand, within BACOVA_02002at 242.349 kb on + strand, within BACOVA_02002at 242.349 kb on + strand, within BACOVA_02002at 242.350 kb on - strand, within BACOVA_02002at 242.363 kb on - strand, within BACOVA_02002at 242.434 kb on - strand, within BACOVA_02002at 242.468 kb on + strandat 242.468 kb on + strandat 242.473 kb on + strandat 242.473 kb on + strandat 242.473 kb on + strandat 242.473 kb on + strandat 242.473 kb on + strandat 242.473 kb on + strandat 242.474 kb on - strandat 242.488 kb on - strandat 242.488 kb on - strandat 242.537 kb on - strandat 242.537 kb on - strandat 242.540 kb on + strandat 242.541 kb on - strandat 242.549 kb on + strandat 242.550 kb on - strandat 242.571 kb on - strandat 242.571 kb on - strandat 242.588 kb on + strandat 242.605 kb on + strandat 242.605 kb on + strandat 242.606 kb on - strandat 242.607 kb on + strandat 242.674 kb on + strandat 242.674 kb on + strandat 242.675 kb on - strandat 242.721 kb on - strandat 242.725 kb on + strandat 242.777 kb on + strandat 242.856 kb on - strandat 242.863 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Dextran, Mw ~200,000 2.5 mg/ml (C)
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241,901 + BACOVA_02002 0.45 -0.5
241,901 + BACOVA_02002 0.45 -0.3
241,901 + BACOVA_02002 0.45 -1.8
241,901 + BACOVA_02002 0.45 -2.9
241,931 + BACOVA_02002 0.48 -1.5
241,936 - BACOVA_02002 0.48 -1.9
242,048 + BACOVA_02002 0.57 -3.4
242,050 + BACOVA_02002 0.57 +0.0
242,054 - BACOVA_02002 0.58 +1.9
242,054 - BACOVA_02002 0.58 -0.7
242,057 + BACOVA_02002 0.58 -2.2
242,064 - BACOVA_02002 0.59 -2.3
242,067 + BACOVA_02002 0.59 -2.1
242,067 + BACOVA_02002 0.59 -0.8
242,068 - BACOVA_02002 0.59 -2.7
242,119 - BACOVA_02002 0.63 -1.4
242,155 + BACOVA_02002 0.66 +0.4
242,239 - BACOVA_02002 0.73 -1.7
242,239 - BACOVA_02002 0.73 -0.6
242,241 - BACOVA_02002 0.73 -0.4
242,311 + BACOVA_02002 0.78 -0.8
242,311 + BACOVA_02002 0.78 -1.5
242,316 + BACOVA_02002 0.79 -2.1
242,347 + BACOVA_02002 0.81 -1.6
242,347 + BACOVA_02002 0.81 -0.3
242,347 + BACOVA_02002 0.81 -3.0
242,347 + BACOVA_02002 0.81 -0.2
242,348 - BACOVA_02002 0.81 -0.7
242,349 + BACOVA_02002 0.81 -1.3
242,349 + BACOVA_02002 0.81 -3.3
242,350 - BACOVA_02002 0.82 -1.8
242,363 - BACOVA_02002 0.83 -0.4
242,434 - BACOVA_02002 0.88 -2.1
242,468 + +1.2
242,468 + -2.1
242,473 + -1.6
242,473 + -1.3
242,473 + -0.8
242,473 + -1.0
242,473 + -2.5
242,473 + -0.0
242,474 - +0.0
242,488 - -1.6
242,488 - -1.5
242,537 - -0.2
242,537 - -2.0
242,540 + -2.5
242,541 - -4.1
242,549 + -1.3
242,550 - -0.2
242,571 - -0.7
242,571 - -1.4
242,588 + -0.7
242,605 + -1.3
242,605 + +0.0
242,606 - +2.2
242,607 + -0.1
242,674 + -1.0
242,674 + +0.4
242,675 - -0.6
242,721 - -0.4
242,725 + -0.6
242,777 + -0.0
242,856 - -0.8
242,863 - -1.0

Or see this region's nucleotide sequence