Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_01781

Experiment: Dextran, Mw ~200,000 2.5 mg/ml (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_01780 and BACOVA_01781 are separated by 17 nucleotidesBACOVA_01781 and BACOVA_01782 are separated by 89 nucleotides BACOVA_01780: BACOVA_01780 - hypothetical protein, at 201,624 to 202,508 _01780 BACOVA_01781: BACOVA_01781 - xanthine phosphoribosyltransferase, at 202,526 to 203,098 _01781 BACOVA_01782: BACOVA_01782 - hypothetical protein, at 203,188 to 204,495 _01782 Position (kb) 202 203 204Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 201.554 kb on - strandat 201.554 kb on - strandat 201.653 kb on + strandat 201.654 kb on - strandat 201.667 kb on - strandat 201.735 kb on - strand, within BACOVA_01780at 201.747 kb on - strand, within BACOVA_01780at 201.751 kb on + strand, within BACOVA_01780at 201.751 kb on + strand, within BACOVA_01780at 201.752 kb on - strand, within BACOVA_01780at 201.779 kb on + strand, within BACOVA_01780at 201.898 kb on + strand, within BACOVA_01780at 201.938 kb on + strand, within BACOVA_01780at 201.957 kb on - strand, within BACOVA_01780at 201.971 kb on + strand, within BACOVA_01780at 201.972 kb on - strand, within BACOVA_01780at 201.972 kb on - strand, within BACOVA_01780at 201.972 kb on - strand, within BACOVA_01780at 201.982 kb on - strand, within BACOVA_01780at 201.982 kb on - strand, within BACOVA_01780at 202.022 kb on + strand, within BACOVA_01780at 202.091 kb on + strand, within BACOVA_01780at 202.091 kb on + strand, within BACOVA_01780at 202.092 kb on - strand, within BACOVA_01780at 202.100 kb on + strand, within BACOVA_01780at 202.104 kb on + strand, within BACOVA_01780at 202.104 kb on + strand, within BACOVA_01780at 202.104 kb on + strand, within BACOVA_01780at 202.108 kb on + strand, within BACOVA_01780at 202.129 kb on + strand, within BACOVA_01780at 202.130 kb on - strand, within BACOVA_01780at 202.134 kb on - strand, within BACOVA_01780at 202.134 kb on - strand, within BACOVA_01780at 202.134 kb on - strand, within BACOVA_01780at 202.170 kb on - strand, within BACOVA_01780at 202.190 kb on - strand, within BACOVA_01780at 202.190 kb on - strand, within BACOVA_01780at 202.201 kb on + strand, within BACOVA_01780at 202.201 kb on + strand, within BACOVA_01780at 202.206 kb on - strand, within BACOVA_01780at 202.316 kb on + strand, within BACOVA_01780at 202.373 kb on + strand, within BACOVA_01780at 202.374 kb on - strand, within BACOVA_01780at 202.522 kb on + strandat 202.544 kb on - strandat 202.615 kb on + strand, within BACOVA_01781at 202.659 kb on - strand, within BACOVA_01781at 202.693 kb on + strand, within BACOVA_01781at 202.716 kb on + strand, within BACOVA_01781at 202.777 kb on + strand, within BACOVA_01781at 202.788 kb on + strand, within BACOVA_01781at 202.789 kb on - strand, within BACOVA_01781at 202.789 kb on - strand, within BACOVA_01781at 202.827 kb on - strand, within BACOVA_01781at 202.868 kb on + strand, within BACOVA_01781at 202.890 kb on + strand, within BACOVA_01781at 203.023 kb on + strand, within BACOVA_01781at 203.091 kb on - strandat 203.103 kb on + strandat 203.104 kb on - strandat 203.116 kb on - strandat 203.128 kb on - strandat 203.162 kb on - strandat 203.163 kb on + strandat 203.164 kb on - strandat 203.167 kb on - strandat 203.203 kb on + strandat 203.266 kb on - strandat 203.297 kb on - strandat 203.297 kb on - strandat 203.308 kb on + strandat 203.309 kb on - strandat 203.310 kb on + strandat 203.311 kb on - strandat 203.311 kb on - strandat 203.339 kb on + strand, within BACOVA_01782at 203.340 kb on - strand, within BACOVA_01782at 203.340 kb on - strand, within BACOVA_01782at 203.340 kb on - strand, within BACOVA_01782at 203.412 kb on + strand, within BACOVA_01782at 203.462 kb on - strand, within BACOVA_01782at 203.479 kb on - strand, within BACOVA_01782at 203.494 kb on - strand, within BACOVA_01782at 203.524 kb on - strand, within BACOVA_01782at 203.581 kb on + strand, within BACOVA_01782at 203.638 kb on + strand, within BACOVA_01782at 203.642 kb on - strand, within BACOVA_01782at 203.706 kb on - strand, within BACOVA_01782at 203.706 kb on - strand, within BACOVA_01782at 203.796 kb on - strand, within BACOVA_01782at 203.796 kb on - strand, within BACOVA_01782at 203.936 kb on + strand, within BACOVA_01782at 203.936 kb on + strand, within BACOVA_01782at 203.937 kb on - strand, within BACOVA_01782at 203.947 kb on - strand, within BACOVA_01782at 203.953 kb on + strand, within BACOVA_01782at 204.062 kb on - strand, within BACOVA_01782

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Per-strain Table

Position Strand Gene LocusTag Fraction Dextran, Mw ~200,000 2.5 mg/ml (C)
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201,554 - +1.1
201,554 - +1.9
201,653 + -0.6
201,654 - -0.9
201,667 - -2.1
201,735 - BACOVA_01780 0.13 +1.2
201,747 - BACOVA_01780 0.14 -0.3
201,751 + BACOVA_01780 0.14 -0.9
201,751 + BACOVA_01780 0.14 +0.6
201,752 - BACOVA_01780 0.14 +0.6
201,779 + BACOVA_01780 0.18 -1.2
201,898 + BACOVA_01780 0.31 -0.1
201,938 + BACOVA_01780 0.35 -0.9
201,957 - BACOVA_01780 0.38 -1.3
201,971 + BACOVA_01780 0.39 +1.5
201,972 - BACOVA_01780 0.39 +0.2
201,972 - BACOVA_01780 0.39 +0.1
201,972 - BACOVA_01780 0.39 +0.7
201,982 - BACOVA_01780 0.40 +0.9
201,982 - BACOVA_01780 0.40 +0.0
202,022 + BACOVA_01780 0.45 +1.1
202,091 + BACOVA_01780 0.53 -0.5
202,091 + BACOVA_01780 0.53 +1.7
202,092 - BACOVA_01780 0.53 -1.6
202,100 + BACOVA_01780 0.54 -0.5
202,104 + BACOVA_01780 0.54 -0.3
202,104 + BACOVA_01780 0.54 -0.9
202,104 + BACOVA_01780 0.54 -1.7
202,108 + BACOVA_01780 0.55 -1.7
202,129 + BACOVA_01780 0.57 +0.5
202,130 - BACOVA_01780 0.57 +1.5
202,134 - BACOVA_01780 0.58 -1.3
202,134 - BACOVA_01780 0.58 -1.5
202,134 - BACOVA_01780 0.58 -0.9
202,170 - BACOVA_01780 0.62 +0.7
202,190 - BACOVA_01780 0.64 -0.2
202,190 - BACOVA_01780 0.64 +0.8
202,201 + BACOVA_01780 0.65 -0.1
202,201 + BACOVA_01780 0.65 -0.5
202,206 - BACOVA_01780 0.66 +0.6
202,316 + BACOVA_01780 0.78 -1.0
202,373 + BACOVA_01780 0.85 -2.2
202,374 - BACOVA_01780 0.85 +0.7
202,522 + -1.3
202,544 - -0.3
202,615 + BACOVA_01781 0.16 -0.9
202,659 - BACOVA_01781 0.23 -2.9
202,693 + BACOVA_01781 0.29 +0.5
202,716 + BACOVA_01781 0.33 +0.9
202,777 + BACOVA_01781 0.44 +0.9
202,788 + BACOVA_01781 0.46 -0.1
202,789 - BACOVA_01781 0.46 +0.5
202,789 - BACOVA_01781 0.46 +1.3
202,827 - BACOVA_01781 0.53 +0.1
202,868 + BACOVA_01781 0.60 -1.9
202,890 + BACOVA_01781 0.64 -0.1
203,023 + BACOVA_01781 0.87 +0.7
203,091 - +0.1
203,103 + +1.5
203,104 - +0.9
203,116 - +0.2
203,128 - -1.4
203,162 - -0.3
203,163 + +0.7
203,164 - -0.2
203,167 - -0.3
203,203 + +1.0
203,266 - +0.3
203,297 - -0.3
203,297 - -1.2
203,308 + +0.6
203,309 - -0.1
203,310 + +0.2
203,311 - +0.4
203,311 - +0.4
203,339 + BACOVA_01782 0.12 +0.7
203,340 - BACOVA_01782 0.12 -0.2
203,340 - BACOVA_01782 0.12 -2.3
203,340 - BACOVA_01782 0.12 +1.5
203,412 + BACOVA_01782 0.17 +0.1
203,462 - BACOVA_01782 0.21 +3.2
203,479 - BACOVA_01782 0.22 +0.4
203,494 - BACOVA_01782 0.23 +0.1
203,524 - BACOVA_01782 0.26 -2.2
203,581 + BACOVA_01782 0.30 +1.4
203,638 + BACOVA_01782 0.34 +0.5
203,642 - BACOVA_01782 0.35 -0.8
203,706 - BACOVA_01782 0.40 +0.8
203,706 - BACOVA_01782 0.40 -1.7
203,796 - BACOVA_01782 0.46 +2.3
203,796 - BACOVA_01782 0.46 +1.5
203,936 + BACOVA_01782 0.57 +0.9
203,936 + BACOVA_01782 0.57 +0.5
203,937 - BACOVA_01782 0.57 -0.5
203,947 - BACOVA_01782 0.58 -0.9
203,953 + BACOVA_01782 0.58 +2.1
204,062 - BACOVA_01782 0.67 -2.7

Or see this region's nucleotide sequence