Experiment: Dextran, Mw ~200,000 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_00668 and BACOVA_00669 overlap by 20 nucleotides BACOVA_00669 and BACOVA_00670 overlap by 4 nucleotides BACOVA_00670 and BACOVA_00671 are separated by 58 nucleotides
BACOVA_00668: BACOVA_00668 - hypothetical protein, at 29,949 to 30,278
_00668
BACOVA_00669: BACOVA_00669 - Sigma-70 region 2, at 30,259 to 30,810
_00669
BACOVA_00670: BACOVA_00670 - hypothetical protein, at 30,807 to 31,586
_00670
BACOVA_00671: BACOVA_00671 - NOL1/NOP2/sun family protein, at 31,645 to 33,159
_00671
Position (kb)
30
31
32 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4
5 at 29.917 kb on + strand at 29.917 kb on + strand at 29.918 kb on - strand at 29.937 kb on + strand at 29.937 kb on + strand at 29.938 kb on - strand at 29.941 kb on + strand at 29.941 kb on + strand at 29.951 kb on - strand at 29.976 kb on - strand at 30.045 kb on - strand, within BACOVA_00668 at 30.045 kb on - strand, within BACOVA_00668 at 30.057 kb on - strand, within BACOVA_00668 at 30.168 kb on - strand, within BACOVA_00668 at 30.178 kb on - strand, within BACOVA_00668 at 30.296 kb on + strand at 30.358 kb on + strand, within BACOVA_00669 at 30.384 kb on + strand, within BACOVA_00669 at 30.385 kb on - strand, within BACOVA_00669 at 30.385 kb on - strand, within BACOVA_00669 at 30.399 kb on - strand, within BACOVA_00669 at 30.432 kb on + strand, within BACOVA_00669 at 30.505 kb on + strand, within BACOVA_00669 at 30.505 kb on + strand, within BACOVA_00669 at 30.506 kb on - strand, within BACOVA_00669 at 30.517 kb on - strand, within BACOVA_00669 at 30.550 kb on - strand, within BACOVA_00669 at 30.552 kb on - strand, within BACOVA_00669 at 30.570 kb on - strand, within BACOVA_00669 at 30.570 kb on - strand, within BACOVA_00669 at 30.576 kb on + strand, within BACOVA_00669 at 30.630 kb on + strand, within BACOVA_00669 at 30.630 kb on + strand, within BACOVA_00669 at 30.640 kb on - strand, within BACOVA_00669 at 30.649 kb on - strand, within BACOVA_00669 at 30.649 kb on - strand, within BACOVA_00669 at 30.726 kb on - strand, within BACOVA_00669 at 30.790 kb on + strand at 30.790 kb on + strand at 30.790 kb on + strand at 30.791 kb on - strand at 30.792 kb on + strand at 30.793 kb on - strand at 30.812 kb on + strand at 30.812 kb on + strand at 30.813 kb on - strand at 30.884 kb on + strand at 30.894 kb on - strand, within BACOVA_00670 at 30.924 kb on - strand, within BACOVA_00670 at 30.924 kb on - strand, within BACOVA_00670 at 30.933 kb on - strand, within BACOVA_00670 at 31.007 kb on + strand, within BACOVA_00670 at 31.304 kb on + strand, within BACOVA_00670 at 31.373 kb on + strand, within BACOVA_00670 at 31.374 kb on - strand, within BACOVA_00670 at 31.374 kb on - strand, within BACOVA_00670 at 31.448 kb on + strand, within BACOVA_00670 at 31.466 kb on + strand, within BACOVA_00670 at 31.467 kb on - strand, within BACOVA_00670 at 31.554 kb on + strand at 31.572 kb on + strand at 31.621 kb on - strand at 31.626 kb on + strand at 31.627 kb on - strand at 31.630 kb on + strand at 31.633 kb on + strand at 31.634 kb on - strand at 31.638 kb on + strand at 31.639 kb on - strand at 31.639 kb on - strand at 31.639 kb on - strand at 31.661 kb on + strand at 31.683 kb on + strand at 31.724 kb on - strand at 31.867 kb on + strand, within BACOVA_00671 at 31.904 kb on + strand, within BACOVA_00671 at 31.925 kb on - strand, within BACOVA_00671 at 31.973 kb on - strand, within BACOVA_00671 at 32.045 kb on + strand, within BACOVA_00671 at 32.045 kb on + strand, within BACOVA_00671 at 32.181 kb on - strand, within BACOVA_00671 at 32.232 kb on + strand, within BACOVA_00671 at 32.232 kb on + strand, within BACOVA_00671 at 32.233 kb on - strand, within BACOVA_00671 at 32.322 kb on + strand, within BACOVA_00671 at 32.355 kb on + strand, within BACOVA_00671 at 32.355 kb on + strand, within BACOVA_00671 at 32.355 kb on + strand, within BACOVA_00671 at 32.355 kb on + strand, within BACOVA_00671 at 32.355 kb on + strand, within BACOVA_00671 at 32.357 kb on + strand, within BACOVA_00671 at 32.357 kb on + strand, within BACOVA_00671 at 32.361 kb on + strand, within BACOVA_00671 at 32.361 kb on + strand, within BACOVA_00671 at 32.361 kb on + strand, within BACOVA_00671 at 32.362 kb on - strand, within BACOVA_00671 at 32.364 kb on + strand, within BACOVA_00671 at 32.365 kb on - strand, within BACOVA_00671 at 32.376 kb on + strand, within BACOVA_00671 at 32.439 kb on - strand, within BACOVA_00671 at 32.468 kb on + strand, within BACOVA_00671 at 32.541 kb on + strand, within BACOVA_00671
Per-strain Table
Position Strand Gene LocusTag Fraction Dextran, Mw ~200,000 2.5 mg/ml (C) remove 29,917 + -2.1 29,917 + +1.7 29,918 - +0.7 29,937 + +0.8 29,937 + -0.8 29,938 - -0.4 29,941 + -0.2 29,941 + -0.6 29,951 - -0.7 29,976 - -0.3 30,045 - BACOVA_00668 0.29 -0.2 30,045 - BACOVA_00668 0.29 +1.4 30,057 - BACOVA_00668 0.33 +0.8 30,168 - BACOVA_00668 0.66 -1.5 30,178 - BACOVA_00668 0.69 -1.3 30,296 + -0.5 30,358 + BACOVA_00669 0.18 +2.8 30,384 + BACOVA_00669 0.23 +0.5 30,385 - BACOVA_00669 0.23 -0.4 30,385 - BACOVA_00669 0.23 +1.0 30,399 - BACOVA_00669 0.25 -0.4 30,432 + BACOVA_00669 0.31 +0.8 30,505 + BACOVA_00669 0.45 +0.7 30,505 + BACOVA_00669 0.45 -2.8 30,506 - BACOVA_00669 0.45 -0.0 30,517 - BACOVA_00669 0.47 +1.6 30,550 - BACOVA_00669 0.53 +0.7 30,552 - BACOVA_00669 0.53 -1.2 30,570 - BACOVA_00669 0.56 -2.5 30,570 - BACOVA_00669 0.56 -1.9 30,576 + BACOVA_00669 0.57 -1.7 30,630 + BACOVA_00669 0.67 -0.1 30,630 + BACOVA_00669 0.67 +1.6 30,640 - BACOVA_00669 0.69 -0.3 30,649 - BACOVA_00669 0.71 -0.3 30,649 - BACOVA_00669 0.71 -0.2 30,726 - BACOVA_00669 0.85 -0.0 30,790 + +0.3 30,790 + -0.7 30,790 + -0.1 30,791 - -1.2 30,792 + +1.8 30,793 - +1.6 30,812 + -1.5 30,812 + +0.3 30,813 - +0.6 30,884 + +1.3 30,894 - BACOVA_00670 0.11 +1.9 30,924 - BACOVA_00670 0.15 +0.5 30,924 - BACOVA_00670 0.15 -0.5 30,933 - BACOVA_00670 0.16 -0.0 31,007 + BACOVA_00670 0.26 -0.1 31,304 + BACOVA_00670 0.64 +5.1 31,373 + BACOVA_00670 0.73 -3.9 31,374 - BACOVA_00670 0.73 -0.7 31,374 - BACOVA_00670 0.73 +0.3 31,448 + BACOVA_00670 0.82 -1.4 31,466 + BACOVA_00670 0.84 +0.0 31,467 - BACOVA_00670 0.85 -1.0 31,554 + -1.2 31,572 + +0.2 31,621 - -0.1 31,626 + -0.3 31,627 - -0.7 31,630 + +0.7 31,633 + -0.5 31,634 - -0.3 31,638 + -2.5 31,639 - -0.3 31,639 - +0.1 31,639 - +1.3 31,661 + -1.9 31,683 + +0.7 31,724 - +0.3 31,867 + BACOVA_00671 0.15 +1.0 31,904 + BACOVA_00671 0.17 +0.7 31,925 - BACOVA_00671 0.18 +1.9 31,973 - BACOVA_00671 0.22 +0.6 32,045 + BACOVA_00671 0.26 -2.2 32,045 + BACOVA_00671 0.26 -1.3 32,181 - BACOVA_00671 0.35 -1.3 32,232 + BACOVA_00671 0.39 -0.7 32,232 + BACOVA_00671 0.39 +1.3 32,233 - BACOVA_00671 0.39 +0.3 32,322 + BACOVA_00671 0.45 +2.7 32,355 + BACOVA_00671 0.47 -0.7 32,355 + BACOVA_00671 0.47 +0.3 32,355 + BACOVA_00671 0.47 +1.3 32,355 + BACOVA_00671 0.47 +1.3 32,355 + BACOVA_00671 0.47 +1.1 32,357 + BACOVA_00671 0.47 +1.8 32,357 + BACOVA_00671 0.47 +1.6 32,361 + BACOVA_00671 0.47 +1.9 32,361 + BACOVA_00671 0.47 -0.1 32,361 + BACOVA_00671 0.47 +0.3 32,362 - BACOVA_00671 0.47 +0.3 32,364 + BACOVA_00671 0.47 +0.6 32,365 - BACOVA_00671 0.48 -0.1 32,376 + BACOVA_00671 0.48 +0.7 32,439 - BACOVA_00671 0.52 +2.7 32,468 + BACOVA_00671 0.54 +0.7 32,541 + BACOVA_00671 0.59 -1.7
Or see this region's nucleotide sequence