Experiment: Dextran, Mw ~200,000 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_00586 and BACOVA_00587 are separated by 20 nucleotides BACOVA_00587 and BACOVA_00588 are separated by 21 nucleotides
BACOVA_00586: BACOVA_00586 - tetratricopeptide repeat protein, at 20,025 to 23,306
_00586
BACOVA_00587: BACOVA_00587 - hypothetical protein, at 23,327 to 23,995
_00587
BACOVA_00588: BACOVA_00588 - hypothetical protein, at 24,017 to 25,633
_00588
Position (kb) 23
24 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 22.360 kb on + strand, within BACOVA_00586 at 22.361 kb on - strand, within BACOVA_00586 at 22.372 kb on - strand, within BACOVA_00586 at 22.397 kb on + strand, within BACOVA_00586 at 22.446 kb on - strand, within BACOVA_00586 at 22.454 kb on + strand, within BACOVA_00586 at 22.454 kb on + strand, within BACOVA_00586 at 22.454 kb on + strand, within BACOVA_00586 at 22.455 kb on - strand, within BACOVA_00586 at 22.455 kb on - strand, within BACOVA_00586 at 22.455 kb on - strand, within BACOVA_00586 at 22.458 kb on + strand, within BACOVA_00586 at 22.459 kb on - strand, within BACOVA_00586 at 22.529 kb on + strand, within BACOVA_00586 at 22.555 kb on + strand, within BACOVA_00586 at 22.560 kb on + strand, within BACOVA_00586 at 22.561 kb on - strand, within BACOVA_00586 at 22.591 kb on + strand, within BACOVA_00586 at 22.670 kb on - strand, within BACOVA_00586 at 22.681 kb on - strand, within BACOVA_00586 at 22.689 kb on - strand, within BACOVA_00586 at 22.702 kb on + strand, within BACOVA_00586 at 22.703 kb on - strand, within BACOVA_00586 at 22.703 kb on - strand, within BACOVA_00586 at 22.703 kb on - strand, within BACOVA_00586 at 22.706 kb on - strand, within BACOVA_00586 at 22.760 kb on - strand, within BACOVA_00586 at 22.770 kb on - strand, within BACOVA_00586 at 22.779 kb on + strand, within BACOVA_00586 at 22.791 kb on + strand, within BACOVA_00586 at 22.792 kb on - strand, within BACOVA_00586 at 22.827 kb on + strand, within BACOVA_00586 at 22.827 kb on + strand, within BACOVA_00586 at 22.827 kb on + strand, within BACOVA_00586 at 22.832 kb on - strand, within BACOVA_00586 at 22.850 kb on + strand, within BACOVA_00586 at 22.857 kb on + strand, within BACOVA_00586 at 22.932 kb on - strand, within BACOVA_00586 at 22.932 kb on - strand, within BACOVA_00586 at 22.936 kb on + strand, within BACOVA_00586 at 22.991 kb on - strand at 22.998 kb on - strand at 23.047 kb on + strand at 23.048 kb on - strand at 23.053 kb on - strand at 23.146 kb on + strand at 23.147 kb on - strand at 23.148 kb on + strand at 23.148 kb on + strand at 23.148 kb on + strand at 23.149 kb on - strand at 23.149 kb on - strand at 23.175 kb on - strand at 23.198 kb on + strand at 23.199 kb on - strand at 23.229 kb on + strand at 23.229 kb on + strand at 23.229 kb on + strand at 23.229 kb on + strand at 23.257 kb on + strand at 23.272 kb on - strand at 23.272 kb on - strand at 23.283 kb on + strand at 23.289 kb on + strand at 23.289 kb on + strand at 23.306 kb on + strand at 23.308 kb on + strand at 23.309 kb on - strand at 23.309 kb on - strand at 23.312 kb on - strand at 23.334 kb on - strand at 23.368 kb on + strand at 23.455 kb on + strand, within BACOVA_00587 at 23.615 kb on + strand, within BACOVA_00587 at 23.615 kb on + strand, within BACOVA_00587 at 23.615 kb on + strand, within BACOVA_00587 at 23.616 kb on - strand, within BACOVA_00587 at 23.616 kb on - strand, within BACOVA_00587 at 23.622 kb on - strand, within BACOVA_00587 at 23.670 kb on + strand, within BACOVA_00587 at 23.670 kb on + strand, within BACOVA_00587 at 23.670 kb on + strand, within BACOVA_00587 at 23.670 kb on + strand, within BACOVA_00587 at 23.671 kb on - strand, within BACOVA_00587 at 23.671 kb on - strand, within BACOVA_00587 at 23.671 kb on - strand, within BACOVA_00587 at 23.727 kb on + strand, within BACOVA_00587 at 24.025 kb on + strand at 24.031 kb on + strand at 24.031 kb on + strand at 24.032 kb on - strand at 24.067 kb on + strand at 24.072 kb on + strand at 24.072 kb on + strand at 24.072 kb on + strand at 24.073 kb on - strand at 24.081 kb on - strand at 24.081 kb on - strand at 24.086 kb on - strand at 24.141 kb on - strand at 24.204 kb on + strand, within BACOVA_00588 at 24.205 kb on - strand, within BACOVA_00588 at 24.223 kb on + strand, within BACOVA_00588 at 24.224 kb on - strand, within BACOVA_00588 at 24.224 kb on - strand, within BACOVA_00588 at 24.255 kb on + strand, within BACOVA_00588 at 24.257 kb on + strand, within BACOVA_00588 at 24.258 kb on - strand, within BACOVA_00588 at 24.308 kb on - strand, within BACOVA_00588 at 24.322 kb on - strand, within BACOVA_00588 at 24.322 kb on - strand, within BACOVA_00588 at 24.324 kb on + strand, within BACOVA_00588 at 24.324 kb on + strand, within BACOVA_00588 at 24.325 kb on - strand, within BACOVA_00588 at 24.325 kb on - strand, within BACOVA_00588 at 24.329 kb on + strand, within BACOVA_00588 at 24.358 kb on - strand, within BACOVA_00588 at 24.387 kb on + strand, within BACOVA_00588 at 24.388 kb on - strand, within BACOVA_00588 at 24.388 kb on - strand, within BACOVA_00588 at 24.477 kb on - strand, within BACOVA_00588 at 24.478 kb on + strand, within BACOVA_00588 at 24.526 kb on + strand, within BACOVA_00588 at 24.535 kb on - strand, within BACOVA_00588 at 24.563 kb on - strand, within BACOVA_00588 at 24.570 kb on + strand, within BACOVA_00588 at 24.571 kb on - strand, within BACOVA_00588 at 24.571 kb on - strand, within BACOVA_00588 at 24.573 kb on + strand, within BACOVA_00588 at 24.588 kb on - strand, within BACOVA_00588 at 24.588 kb on - strand, within BACOVA_00588 at 24.626 kb on - strand, within BACOVA_00588 at 24.673 kb on + strand, within BACOVA_00588 at 24.674 kb on - strand, within BACOVA_00588 at 24.674 kb on - strand, within BACOVA_00588 at 24.674 kb on - strand, within BACOVA_00588 at 24.677 kb on - strand, within BACOVA_00588 at 24.764 kb on + strand, within BACOVA_00588 at 24.764 kb on + strand, within BACOVA_00588 at 24.886 kb on + strand, within BACOVA_00588 at 24.889 kb on + strand, within BACOVA_00588 at 24.889 kb on + strand, within BACOVA_00588 at 24.890 kb on - strand, within BACOVA_00588 at 24.892 kb on - strand, within BACOVA_00588 at 24.900 kb on + strand, within BACOVA_00588 at 24.956 kb on - strand, within BACOVA_00588 at 24.977 kb on + strand, within BACOVA_00588 at 24.977 kb on + strand, within BACOVA_00588 at 24.977 kb on + strand, within BACOVA_00588 at 24.981 kb on - strand, within BACOVA_00588 at 24.987 kb on - strand, within BACOVA_00588
Per-strain Table
Position Strand Gene LocusTag Fraction Dextran, Mw ~200,000 2.5 mg/ml (C) remove 22,360 + BACOVA_00586 0.71 +1.8 22,361 - BACOVA_00586 0.71 -0.6 22,372 - BACOVA_00586 0.72 -2.3 22,397 + BACOVA_00586 0.72 -0.9 22,446 - BACOVA_00586 0.74 -1.4 22,454 + BACOVA_00586 0.74 -2.0 22,454 + BACOVA_00586 0.74 +0.0 22,454 + BACOVA_00586 0.74 +0.7 22,455 - BACOVA_00586 0.74 +0.2 22,455 - BACOVA_00586 0.74 +0.8 22,455 - BACOVA_00586 0.74 -0.6 22,458 + BACOVA_00586 0.74 -1.4 22,459 - BACOVA_00586 0.74 -0.2 22,529 + BACOVA_00586 0.76 +1.2 22,555 + BACOVA_00586 0.77 -2.8 22,560 + BACOVA_00586 0.77 -1.4 22,561 - BACOVA_00586 0.77 -0.2 22,591 + BACOVA_00586 0.78 -1.2 22,670 - BACOVA_00586 0.81 -1.3 22,681 - BACOVA_00586 0.81 +0.0 22,689 - BACOVA_00586 0.81 +1.1 22,702 + BACOVA_00586 0.82 -0.9 22,703 - BACOVA_00586 0.82 -0.5 22,703 - BACOVA_00586 0.82 +0.9 22,703 - BACOVA_00586 0.82 +1.8 22,706 - BACOVA_00586 0.82 -0.2 22,760 - BACOVA_00586 0.83 -0.6 22,770 - BACOVA_00586 0.84 +0.8 22,779 + BACOVA_00586 0.84 -0.1 22,791 + BACOVA_00586 0.84 -0.3 22,792 - BACOVA_00586 0.84 -0.4 22,827 + BACOVA_00586 0.85 -0.4 22,827 + BACOVA_00586 0.85 +0.6 22,827 + BACOVA_00586 0.85 +0.3 22,832 - BACOVA_00586 0.86 +2.4 22,850 + BACOVA_00586 0.86 +1.4 22,857 + BACOVA_00586 0.86 -0.0 22,932 - BACOVA_00586 0.89 +0.7 22,932 - BACOVA_00586 0.89 +0.8 22,936 + BACOVA_00586 0.89 +0.2 22,991 - -0.0 22,998 - +0.3 23,047 + -0.6 23,048 - -0.4 23,053 - +1.0 23,146 + -0.0 23,147 - -1.4 23,148 + +0.7 23,148 + -1.7 23,148 + -2.8 23,149 - -0.8 23,149 - -1.6 23,175 - -0.2 23,198 + +1.4 23,199 - -0.6 23,229 + +0.9 23,229 + +0.5 23,229 + -0.9 23,229 + -1.1 23,257 + +0.3 23,272 - -0.7 23,272 - +0.8 23,283 + -1.4 23,289 + +1.0 23,289 + -0.8 23,306 + -0.3 23,308 + +1.2 23,309 - -0.2 23,309 - -2.2 23,312 - +2.8 23,334 - -0.4 23,368 + -0.6 23,455 + BACOVA_00587 0.19 -0.2 23,615 + BACOVA_00587 0.43 -2.7 23,615 + BACOVA_00587 0.43 +1.1 23,615 + BACOVA_00587 0.43 +0.6 23,616 - BACOVA_00587 0.43 +1.8 23,616 - BACOVA_00587 0.43 -2.6 23,622 - BACOVA_00587 0.44 +1.4 23,670 + BACOVA_00587 0.51 +1.1 23,670 + BACOVA_00587 0.51 -0.4 23,670 + BACOVA_00587 0.51 +4.2 23,670 + BACOVA_00587 0.51 -1.2 23,671 - BACOVA_00587 0.51 -1.4 23,671 - BACOVA_00587 0.51 +1.7 23,671 - BACOVA_00587 0.51 -1.8 23,727 + BACOVA_00587 0.60 +2.0 24,025 + +0.3 24,031 + +2.7 24,031 + -0.4 24,032 - -0.8 24,067 + -0.4 24,072 + +0.4 24,072 + -1.7 24,072 + +0.9 24,073 - +0.9 24,081 - +0.4 24,081 - -0.1 24,086 - +1.4 24,141 - -1.2 24,204 + BACOVA_00588 0.12 +0.2 24,205 - BACOVA_00588 0.12 -0.2 24,223 + BACOVA_00588 0.13 -0.1 24,224 - BACOVA_00588 0.13 -0.7 24,224 - BACOVA_00588 0.13 -1.2 24,255 + BACOVA_00588 0.15 -0.4 24,257 + BACOVA_00588 0.15 -0.5 24,258 - BACOVA_00588 0.15 -0.9 24,308 - BACOVA_00588 0.18 -0.6 24,322 - BACOVA_00588 0.19 +0.6 24,322 - BACOVA_00588 0.19 -2.2 24,324 + BACOVA_00588 0.19 -0.2 24,324 + BACOVA_00588 0.19 +0.1 24,325 - BACOVA_00588 0.19 +1.4 24,325 - BACOVA_00588 0.19 +1.8 24,329 + BACOVA_00588 0.19 +0.9 24,358 - BACOVA_00588 0.21 -0.6 24,387 + BACOVA_00588 0.23 +0.4 24,388 - BACOVA_00588 0.23 +1.0 24,388 - BACOVA_00588 0.23 -0.9 24,477 - BACOVA_00588 0.28 -3.2 24,478 + BACOVA_00588 0.29 -2.7 24,526 + BACOVA_00588 0.31 -0.9 24,535 - BACOVA_00588 0.32 -0.3 24,563 - BACOVA_00588 0.34 +1.2 24,570 + BACOVA_00588 0.34 -0.7 24,571 - BACOVA_00588 0.34 -0.7 24,571 - BACOVA_00588 0.34 -0.2 24,573 + BACOVA_00588 0.34 -0.2 24,588 - BACOVA_00588 0.35 -1.2 24,588 - BACOVA_00588 0.35 -1.7 24,626 - BACOVA_00588 0.38 +0.1 24,673 + BACOVA_00588 0.41 -2.0 24,674 - BACOVA_00588 0.41 -0.2 24,674 - BACOVA_00588 0.41 +0.6 24,674 - BACOVA_00588 0.41 +0.4 24,677 - BACOVA_00588 0.41 +0.8 24,764 + BACOVA_00588 0.46 -1.0 24,764 + BACOVA_00588 0.46 -0.6 24,886 + BACOVA_00588 0.54 +0.9 24,889 + BACOVA_00588 0.54 -0.6 24,889 + BACOVA_00588 0.54 -0.0 24,890 - BACOVA_00588 0.54 +1.2 24,892 - BACOVA_00588 0.54 -1.0 24,900 + BACOVA_00588 0.55 -0.4 24,956 - BACOVA_00588 0.58 -1.9 24,977 + BACOVA_00588 0.59 -0.3 24,977 + BACOVA_00588 0.59 -1.5 24,977 + BACOVA_00588 0.59 +1.2 24,981 - BACOVA_00588 0.60 +0.3 24,987 - BACOVA_00588 0.60 -0.9
Or see this region's nucleotide sequence