Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00273

Experiment: Dextran, Mw ~200,000 2.5 mg/ml (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_00272 and BACOVA_00273 are separated by 36 nucleotidesBACOVA_00273 and BACOVA_00274 are separated by 1 nucleotides BACOVA_00272: BACOVA_00272 - transporter, major facilitator family protein, at 527,014 to 528,249 _00272 BACOVA_00273: BACOVA_00273 - YhcH/YjgK/YiaL family protein, at 528,286 to 528,732 _00273 BACOVA_00274: BACOVA_00274 - N-acylglucosamine 2-epimerase, at 528,734 to 529,930 _00274 Position (kb) 528 529Strain fitness (log2 ratio) -2 -1 0 1 2 3at 527.290 kb on + strand, within BACOVA_00272at 527.294 kb on - strand, within BACOVA_00272at 527.321 kb on - strand, within BACOVA_00272at 527.321 kb on - strand, within BACOVA_00272at 527.321 kb on - strand, within BACOVA_00272at 527.327 kb on - strand, within BACOVA_00272at 527.369 kb on + strand, within BACOVA_00272at 527.403 kb on + strand, within BACOVA_00272at 527.425 kb on + strand, within BACOVA_00272at 527.446 kb on + strand, within BACOVA_00272at 527.468 kb on - strand, within BACOVA_00272at 527.649 kb on + strand, within BACOVA_00272at 527.665 kb on + strand, within BACOVA_00272at 527.692 kb on + strand, within BACOVA_00272at 527.717 kb on + strand, within BACOVA_00272at 527.725 kb on - strand, within BACOVA_00272at 527.729 kb on - strand, within BACOVA_00272at 527.729 kb on - strand, within BACOVA_00272at 527.898 kb on + strand, within BACOVA_00272at 527.900 kb on + strand, within BACOVA_00272at 527.900 kb on - strand, within BACOVA_00272at 527.941 kb on + strand, within BACOVA_00272at 527.941 kb on + strand, within BACOVA_00272at 527.942 kb on - strand, within BACOVA_00272at 527.963 kb on + strand, within BACOVA_00272at 528.042 kb on + strand, within BACOVA_00272at 528.064 kb on - strand, within BACOVA_00272at 528.064 kb on - strand, within BACOVA_00272at 528.128 kb on - strandat 528.132 kb on + strandat 528.136 kb on + strandat 528.137 kb on - strandat 528.159 kb on + strandat 528.159 kb on + strandat 528.160 kb on - strandat 528.174 kb on + strandat 528.182 kb on + strandat 528.183 kb on - strandat 528.196 kb on + strandat 528.231 kb on - strandat 528.296 kb on - strandat 528.300 kb on + strandat 528.301 kb on - strandat 528.361 kb on + strand, within BACOVA_00273at 528.361 kb on + strand, within BACOVA_00273at 528.402 kb on + strand, within BACOVA_00273at 528.416 kb on + strand, within BACOVA_00273at 528.416 kb on + strand, within BACOVA_00273at 528.417 kb on - strand, within BACOVA_00273at 528.417 kb on - strand, within BACOVA_00273at 528.418 kb on + strand, within BACOVA_00273at 528.418 kb on + strand, within BACOVA_00273at 528.418 kb on + strand, within BACOVA_00273at 528.512 kb on - strand, within BACOVA_00273at 528.526 kb on - strand, within BACOVA_00273at 528.567 kb on + strand, within BACOVA_00273at 528.601 kb on - strand, within BACOVA_00273at 528.619 kb on - strand, within BACOVA_00273at 528.619 kb on - strand, within BACOVA_00273at 528.775 kb on + strandat 528.776 kb on - strandat 528.777 kb on + strandat 528.867 kb on + strand, within BACOVA_00274at 528.907 kb on + strand, within BACOVA_00274at 528.908 kb on - strand, within BACOVA_00274at 528.909 kb on + strand, within BACOVA_00274at 528.910 kb on - strand, within BACOVA_00274at 528.910 kb on - strand, within BACOVA_00274at 528.946 kb on - strand, within BACOVA_00274at 528.969 kb on + strand, within BACOVA_00274at 528.976 kb on - strand, within BACOVA_00274at 529.032 kb on + strand, within BACOVA_00274at 529.072 kb on + strand, within BACOVA_00274at 529.201 kb on + strand, within BACOVA_00274at 529.234 kb on + strand, within BACOVA_00274at 529.242 kb on - strand, within BACOVA_00274at 529.274 kb on + strand, within BACOVA_00274at 529.318 kb on + strand, within BACOVA_00274at 529.319 kb on - strand, within BACOVA_00274at 529.383 kb on - strand, within BACOVA_00274at 529.395 kb on - strand, within BACOVA_00274at 529.429 kb on + strand, within BACOVA_00274at 529.429 kb on + strand, within BACOVA_00274at 529.429 kb on + strand, within BACOVA_00274at 529.430 kb on - strand, within BACOVA_00274at 529.436 kb on - strand, within BACOVA_00274at 529.473 kb on + strand, within BACOVA_00274at 529.520 kb on - strand, within BACOVA_00274at 529.553 kb on + strand, within BACOVA_00274at 529.627 kb on - strand, within BACOVA_00274at 529.630 kb on + strand, within BACOVA_00274at 529.630 kb on + strand, within BACOVA_00274at 529.631 kb on - strand, within BACOVA_00274at 529.654 kb on - strand, within BACOVA_00274at 529.713 kb on - strand, within BACOVA_00274at 529.720 kb on + strand, within BACOVA_00274at 529.723 kb on - strand, within BACOVA_00274

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Per-strain Table

Position Strand Gene LocusTag Fraction Dextran, Mw ~200,000 2.5 mg/ml (C)
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527,290 + BACOVA_00272 0.22 -0.8
527,294 - BACOVA_00272 0.23 +0.9
527,321 - BACOVA_00272 0.25 -0.1
527,321 - BACOVA_00272 0.25 -0.1
527,321 - BACOVA_00272 0.25 +0.5
527,327 - BACOVA_00272 0.25 +3.3
527,369 + BACOVA_00272 0.29 +0.1
527,403 + BACOVA_00272 0.31 +0.8
527,425 + BACOVA_00272 0.33 -0.7
527,446 + BACOVA_00272 0.35 -0.4
527,468 - BACOVA_00272 0.37 +0.6
527,649 + BACOVA_00272 0.51 +1.7
527,665 + BACOVA_00272 0.53 +0.5
527,692 + BACOVA_00272 0.55 -0.5
527,717 + BACOVA_00272 0.57 +0.6
527,725 - BACOVA_00272 0.58 -0.8
527,729 - BACOVA_00272 0.58 -0.5
527,729 - BACOVA_00272 0.58 +1.2
527,898 + BACOVA_00272 0.72 +0.8
527,900 + BACOVA_00272 0.72 -1.5
527,900 - BACOVA_00272 0.72 +2.1
527,941 + BACOVA_00272 0.75 +0.4
527,941 + BACOVA_00272 0.75 +1.5
527,942 - BACOVA_00272 0.75 +1.5
527,963 + BACOVA_00272 0.77 -0.1
528,042 + BACOVA_00272 0.83 +0.1
528,064 - BACOVA_00272 0.85 +0.4
528,064 - BACOVA_00272 0.85 -0.6
528,128 - +0.6
528,132 + -0.9
528,136 + +0.0
528,137 - +1.9
528,159 + -0.5
528,159 + -0.4
528,160 - -1.8
528,174 + -0.1
528,182 + -1.7
528,183 - +0.5
528,196 + -1.4
528,231 - -2.1
528,296 - -0.1
528,300 + -0.6
528,301 - -1.5
528,361 + BACOVA_00273 0.17 +1.8
528,361 + BACOVA_00273 0.17 -0.2
528,402 + BACOVA_00273 0.26 +0.2
528,416 + BACOVA_00273 0.29 +0.3
528,416 + BACOVA_00273 0.29 -0.5
528,417 - BACOVA_00273 0.29 +0.5
528,417 - BACOVA_00273 0.29 +2.1
528,418 + BACOVA_00273 0.30 +2.4
528,418 + BACOVA_00273 0.30 -1.1
528,418 + BACOVA_00273 0.30 -0.4
528,512 - BACOVA_00273 0.51 +0.5
528,526 - BACOVA_00273 0.54 +0.5
528,567 + BACOVA_00273 0.63 +1.7
528,601 - BACOVA_00273 0.70 +0.9
528,619 - BACOVA_00273 0.74 -0.8
528,619 - BACOVA_00273 0.74 +0.5
528,775 + -0.3
528,776 - +0.5
528,777 + -0.5
528,867 + BACOVA_00274 0.11 -0.5
528,907 + BACOVA_00274 0.14 -0.3
528,908 - BACOVA_00274 0.15 +0.9
528,909 + BACOVA_00274 0.15 -0.0
528,910 - BACOVA_00274 0.15 +1.0
528,910 - BACOVA_00274 0.15 +0.9
528,946 - BACOVA_00274 0.18 -0.0
528,969 + BACOVA_00274 0.20 -1.0
528,976 - BACOVA_00274 0.20 -1.1
529,032 + BACOVA_00274 0.25 +1.4
529,072 + BACOVA_00274 0.28 -0.5
529,201 + BACOVA_00274 0.39 +0.3
529,234 + BACOVA_00274 0.42 -0.3
529,242 - BACOVA_00274 0.42 +0.2
529,274 + BACOVA_00274 0.45 -0.5
529,318 + BACOVA_00274 0.49 +1.9
529,319 - BACOVA_00274 0.49 +0.3
529,383 - BACOVA_00274 0.54 +0.4
529,395 - BACOVA_00274 0.55 -0.1
529,429 + BACOVA_00274 0.58 -1.7
529,429 + BACOVA_00274 0.58 -0.0
529,429 + BACOVA_00274 0.58 +0.2
529,430 - BACOVA_00274 0.58 -1.1
529,436 - BACOVA_00274 0.59 -1.7
529,473 + BACOVA_00274 0.62 +0.1
529,520 - BACOVA_00274 0.66 -1.7
529,553 + BACOVA_00274 0.68 -1.3
529,627 - BACOVA_00274 0.75 -0.8
529,630 + BACOVA_00274 0.75 +0.4
529,630 + BACOVA_00274 0.75 +0.5
529,631 - BACOVA_00274 0.75 -1.8
529,654 - BACOVA_00274 0.77 +1.1
529,713 - BACOVA_00274 0.82 +0.9
529,720 + BACOVA_00274 0.82 -0.7
529,723 - BACOVA_00274 0.83 +0.3

Or see this region's nucleotide sequence