Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_01635

Experiment: Chondroitin sulfate A from bovine trachea 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chondroitin sulfate A from bovine trachea 2.5 mg/ml (C)
140,513	+				-1.4
140,519	-				-1.0
140,561	+				-0.5
140,608	-		BACOVA_01634	0.11	-0.4
140,608	-		BACOVA_01634	0.11	-1.1
140,683	-		BACOVA_01634	0.19	-3.1
140,807	+		BACOVA_01634	0.31	-0.3
140,825	-		BACOVA_01634	0.33	-1.9
140,825	-		BACOVA_01634	0.33	-2.2
140,893	+		BACOVA_01634	0.40	-1.9
140,894	-		BACOVA_01634	0.41	-0.9
140,910	+		BACOVA_01634	0.42	-1.4
140,916	-		BACOVA_01634	0.43	-1.8
140,974	+		BACOVA_01634	0.49	-1.6
140,974	+		BACOVA_01634	0.49	-0.3
140,989	-		BACOVA_01634	0.50	+0.4
140,994	-		BACOVA_01634	0.51	-2.6
140,994	-		BACOVA_01634	0.51	-2.5
140,994	-		BACOVA_01634	0.51	-3.3
141,086	-		BACOVA_01634	0.61	-2.9
141,104	-		BACOVA_01634	0.62	-0.9
141,140	+		BACOVA_01634	0.66	-1.7
141,141	-		BACOVA_01634	0.66	-0.5
141,160	+		BACOVA_01634	0.68	+0.5
141,161	-		BACOVA_01634	0.68	+0.2
141,161	-		BACOVA_01634	0.68	-0.6
141,161	-		BACOVA_01634	0.68	-2.8
141,161	-		BACOVA_01634	0.68	-1.3
141,164	+		BACOVA_01634	0.69	-2.1
141,164	+		BACOVA_01634	0.69	-2.1
141,165	-		BACOVA_01634	0.69	-0.6
141,165	-		BACOVA_01634	0.69	-1.8
141,206	-		BACOVA_01634	0.73	-1.2
141,326	+		BACOVA_01634	0.86	-0.9
141,327	-		BACOVA_01634	0.86	-1.5
141,338	-		BACOVA_01634	0.87	-0.9
141,340	+		BACOVA_01634	0.87	-1.4
141,341	-		BACOVA_01634	0.87	-2.6
141,378	+				-1.0
141,401	-				-1.7
141,401	-				-0.1
141,463	-				-2.2
141,474	+				-0.5
141,474	+				-0.6
141,474	+				-1.7
141,475	-				-2.3
141,475	-				-2.3
141,485	+				+0.4
141,485	+				-1.0
141,520	-				-1.8
141,573	+				-1.0
141,574	-				-2.2
141,574	-				-0.9
141,575	+				-1.4
141,575	+				-0.1
141,576	-				-0.6
141,651	-		BACOVA_01635	0.15	+0.9
141,651	-		BACOVA_01635	0.15	-0.8
141,669	+		BACOVA_01635	0.17	-2.1
141,670	-		BACOVA_01635	0.17	-1.0
141,740	-		BACOVA_01635	0.24	-3.0
141,769	-		BACOVA_01635	0.26	+0.9
141,780	+		BACOVA_01635	0.27	-1.7
141,780	+		BACOVA_01635	0.27	-1.6
141,781	-		BACOVA_01635	0.27	-1.9
141,781	-		BACOVA_01635	0.27	-0.1
141,799	-		BACOVA_01635	0.29	+0.2
141,894	+		BACOVA_01635	0.38	-1.4
141,895	-		BACOVA_01635	0.38	+0.4
141,896	+		BACOVA_01635	0.38	+1.4
141,896	+		BACOVA_01635	0.38	-1.4
141,896	+		BACOVA_01635	0.38	-0.2
141,906	+		BACOVA_01635	0.39	-1.7
141,920	+		BACOVA_01635	0.40	-1.0
141,920	+		BACOVA_01635	0.40	-1.1
141,951	-		BACOVA_01635	0.43	-2.1
142,017	-		BACOVA_01635	0.50	-0.8
142,021	-		BACOVA_01635	0.50	-0.9
142,021	-		BACOVA_01635	0.50	-1.7
142,160	+		BACOVA_01635	0.63	-0.7
142,203	+		BACOVA_01635	0.67	-0.8
142,235	+		BACOVA_01635	0.70	-2.5
142,235	+		BACOVA_01635	0.70	-2.0
142,236	-		BACOVA_01635	0.70	-2.9
142,240	-		BACOVA_01635	0.71	-1.3
142,262	+		BACOVA_01635	0.73	-1.7
142,262	+		BACOVA_01635	0.73	-2.0
142,262	+		BACOVA_01635	0.73	-1.1
142,263	-		BACOVA_01635	0.73	-2.3
142,269	+		BACOVA_01635	0.73	-0.4
142,284	+		BACOVA_01635	0.75	-1.1
142,284	+		BACOVA_01635	0.75	-0.1
142,284	+		BACOVA_01635	0.75	-1.4
142,285	-		BACOVA_01635	0.75	-1.8
142,285	-		BACOVA_01635	0.75	-2.6
142,318	+		BACOVA_01635	0.78	-0.9
142,319	-		BACOVA_01635	0.78	-1.6
142,370	+		BACOVA_01635	0.83	-1.4
142,370	+		BACOVA_01635	0.83	-0.1
142,395	+		BACOVA_01635	0.85	-2.8
142,396	-		BACOVA_01635	0.85	-0.8
142,411	+		BACOVA_01635	0.87	-2.5
142,412	-		BACOVA_01635	0.87	-1.2
142,460	-				-2.4
142,501	-				-1.9
142,508	+				-0.9
142,508	+				-0.6
142,543	+				-0.8
142,544	-				-0.6
142,550	-				-0.9
142,601	-				-0.6
142,614	-				+0.4
142,634	-				+0.5
142,657	+				-0.4
142,660	+				+0.5
142,660	+				-2.3
142,661	-				+0.0
142,662	+				-0.6
142,703	+				-1.0
142,704	-				-0.6
142,707	-				+0.9
142,712	+				-1.1
142,715	+				-0.6
142,716	-				-0.0
142,721	+				-1.2
142,728	+				+0.8
142,729	-				-0.3
142,758	-				-1.0
142,758	-				+0.3
142,763	-				-0.7
142,763	-				+0.9
142,766	-				+1.3
142,869	+				-1.1
142,870	-				+1.0
142,872	-				-1.4
142,935	+				-0.1
142,949	+				+0.4
142,994	-				-0.9
143,041	-				-0.1
143,090	+				-1.3
143,091	-				-1.1
143,172	+				+0.8
143,172	+				+0.2
143,172	+				+0.0
143,172	+				-1.1
143,173	-				-0.1
143,178	+				-0.5
143,179	-				-1.4
143,180	+				+0.5
143,273	+		BACOVA_01636	0.13	+0.1
143,343	+		BACOVA_01636	0.16	-0.5
143,343	+		BACOVA_01636	0.16	+0.2
143,343	+		BACOVA_01636	0.16	-0.4
143,445	+		BACOVA_01636	0.21	-0.5
143,446	-		BACOVA_01636	0.21	-0.1
143,446	-		BACOVA_01636	0.21	+0.2
143,446	-		BACOVA_01636	0.21	-0.6
143,447	+		BACOVA_01636	0.21	-0.2
143,519	+		BACOVA_01636	0.24	+0.1
143,519	+		BACOVA_01636	0.24	-1.1
143,520	-		BACOVA_01636	0.24	-0.9
143,520	-		BACOVA_01636	0.24	-0.2
143,520	-		BACOVA_01636	0.24	-1.9