Experiment: no phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF819 and GFF820 overlap by 4 nucleotides GFF820 and GFF821 are separated by 203 nucleotides GFF821 and GFF822 are separated by 127 nucleotides
GFF819 - Uncharacterized protein CC_2099, at 124,407 to 124,952
GFF819
GFF820 - Intracellular protease, at 124,949 to 125,596
GFF820
GFF821 - Acetoacetyl-CoA reductase (EC 1.1.1.36), at 125,800 to 126,537
GFF821
GFF822 - Na+/H+-dicarboxylate symporter, at 126,665 to 128,008
GFF822
Position (kb) 125
126
127 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 124.987 kb on - strand at 124.987 kb on - strand at 124.987 kb on - strand at 124.987 kb on - strand at 125.022 kb on + strand, within GFF820 at 125.040 kb on + strand, within GFF820 at 125.040 kb on + strand, within GFF820 at 125.041 kb on - strand, within GFF820 at 125.041 kb on - strand, within GFF820 at 125.041 kb on - strand, within GFF820 at 125.043 kb on + strand, within GFF820 at 125.044 kb on - strand, within GFF820 at 125.044 kb on - strand, within GFF820 at 125.044 kb on - strand, within GFF820 at 125.394 kb on + strand, within GFF820 at 125.394 kb on + strand, within GFF820 at 125.394 kb on + strand, within GFF820 at 125.394 kb on + strand, within GFF820 at 125.394 kb on + strand, within GFF820 at 125.394 kb on + strand, within GFF820 at 125.395 kb on - strand, within GFF820 at 125.395 kb on - strand, within GFF820 at 125.395 kb on - strand, within GFF820 at 125.597 kb on - strand at 125.647 kb on + strand at 125.647 kb on + strand at 125.647 kb on + strand at 125.647 kb on + strand at 125.647 kb on + strand at 125.647 kb on + strand at 125.648 kb on - strand at 125.648 kb on - strand at 125.661 kb on + strand at 125.661 kb on + strand at 125.662 kb on - strand at 125.662 kb on - strand at 125.662 kb on - strand at 125.730 kb on + strand at 125.750 kb on - strand at 125.750 kb on - strand at 125.779 kb on + strand at 125.780 kb on - strand at 125.780 kb on - strand at 125.780 kb on - strand at 125.782 kb on + strand at 125.783 kb on + strand at 125.783 kb on + strand at 125.783 kb on + strand at 125.783 kb on + strand at 125.783 kb on + strand at 125.783 kb on + strand at 125.783 kb on + strand at 125.784 kb on - strand at 125.784 kb on - strand at 125.784 kb on - strand at 125.784 kb on - strand at 125.784 kb on - strand at 125.784 kb on - strand at 125.784 kb on - strand at 125.787 kb on + strand at 125.787 kb on + strand at 125.788 kb on - strand at 125.788 kb on - strand at 125.788 kb on - strand at 125.818 kb on + strand at 125.818 kb on + strand at 125.818 kb on + strand at 125.818 kb on + strand at 125.818 kb on + strand at 125.818 kb on + strand at 125.818 kb on + strand at 125.818 kb on + strand at 125.818 kb on + strand at 125.818 kb on + strand at 125.819 kb on - strand at 125.819 kb on - strand at 125.819 kb on - strand at 125.819 kb on - strand at 125.819 kb on - strand at 125.917 kb on + strand, within GFF821 at 126.253 kb on + strand, within GFF821 at 126.253 kb on + strand, within GFF821 at 126.253 kb on + strand, within GFF821 at 126.254 kb on - strand, within GFF821 at 126.254 kb on - strand, within GFF821 at 126.350 kb on - strand, within GFF821 at 126.487 kb on + strand at 126.627 kb on + strand at 126.637 kb on + strand at 126.637 kb on + strand at 126.637 kb on + strand at 126.637 kb on + strand at 126.637 kb on + strand at 126.637 kb on + strand at 126.638 kb on - strand at 126.638 kb on - strand at 126.665 kb on + strand at 126.707 kb on + strand at 126.719 kb on + strand at 126.719 kb on + strand at 126.719 kb on + strand at 126.719 kb on + strand at 126.719 kb on + strand at 126.719 kb on + strand at 126.720 kb on - strand at 126.771 kb on - strand at 126.771 kb on - strand at 126.771 kb on - strand at 126.771 kb on - strand at 126.771 kb on - strand at 126.929 kb on + strand, within GFF822 at 126.929 kb on + strand, within GFF822 at 126.929 kb on + strand, within GFF822 at 126.929 kb on + strand, within GFF822 at 127.049 kb on + strand, within GFF822 at 127.049 kb on + strand, within GFF822 at 127.050 kb on - strand, within GFF822 at 127.050 kb on - strand, within GFF822 at 127.050 kb on - strand, within GFF822 at 127.050 kb on - strand, within GFF822 at 127.050 kb on - strand, within GFF822 at 127.262 kb on + strand, within GFF822 at 127.262 kb on + strand, within GFF822 at 127.262 kb on + strand, within GFF822 at 127.262 kb on + strand, within GFF822 at 127.262 kb on + strand, within GFF822 at 127.262 kb on + strand, within GFF822 at 127.262 kb on + strand, within GFF822 at 127.262 kb on + strand, within GFF822 at 127.262 kb on + strand, within GFF822 at 127.262 kb on + strand, within GFF822 at 127.262 kb on + strand, within GFF822 at 127.263 kb on - strand, within GFF822 at 127.263 kb on - strand, within GFF822 at 127.263 kb on - strand, within GFF822 at 127.263 kb on - strand, within GFF822 at 127.263 kb on - strand, within GFF822 at 127.263 kb on - strand, within GFF822 at 127.263 kb on - strand, within GFF822 at 127.263 kb on - strand, within GFF822 at 127.263 kb on - strand, within GFF822 at 127.263 kb on - strand, within GFF822 at 127.370 kb on + strand, within GFF822 at 127.370 kb on + strand, within GFF822 at 127.370 kb on + strand, within GFF822 at 127.370 kb on + strand, within GFF822 at 127.371 kb on - strand, within GFF822 at 127.371 kb on - strand, within GFF822 at 127.371 kb on - strand, within GFF822 at 127.371 kb on - strand, within GFF822 at 127.371 kb on - strand, within GFF822 at 127.371 kb on - strand, within GFF822 at 127.374 kb on + strand, within GFF822 at 127.455 kb on - strand, within GFF822 at 127.455 kb on - strand, within GFF822 at 127.455 kb on - strand, within GFF822 at 127.455 kb on - strand, within GFF822 at 127.455 kb on - strand, within GFF822 at 127.455 kb on - strand, within GFF822
Per-strain Table
Position Strand Gene LocusTag Fraction no phage control remove 124,987 - -0.6 124,987 - -0.6 124,987 - +0.2 124,987 - -0.3 125,022 + GFF820 0.11 -0.9 125,040 + GFF820 0.14 +0.3 125,040 + GFF820 0.14 -0.4 125,041 - GFF820 0.14 -0.3 125,041 - GFF820 0.14 -1.0 125,041 - GFF820 0.14 -2.2 125,043 + GFF820 0.15 -0.5 125,044 - GFF820 0.15 -0.0 125,044 - GFF820 0.15 +1.3 125,044 - GFF820 0.15 -0.0 125,394 + GFF820 0.69 -0.0 125,394 + GFF820 0.69 -0.1 125,394 + GFF820 0.69 -1.3 125,394 + GFF820 0.69 +0.0 125,394 + GFF820 0.69 +0.1 125,394 + GFF820 0.69 -0.2 125,395 - GFF820 0.69 -0.1 125,395 - GFF820 0.69 -0.0 125,395 - GFF820 0.69 -0.9 125,597 - -0.6 125,647 + -0.1 125,647 + -0.2 125,647 + +0.3 125,647 + -0.4 125,647 + -0.3 125,647 + -0.2 125,648 - +0.0 125,648 - +1.5 125,661 + +0.5 125,661 + +0.1 125,662 - +0.3 125,662 - -0.0 125,662 - -0.1 125,730 + +0.5 125,750 - -0.2 125,750 - +0.5 125,779 + -0.3 125,780 - -0.0 125,780 - +0.4 125,780 - +0.0 125,782 + -1.0 125,783 + -1.9 125,783 + -0.2 125,783 + -0.3 125,783 + +1.0 125,783 + +1.5 125,783 + -0.5 125,783 + -0.9 125,784 - +0.0 125,784 - +0.3 125,784 - -0.5 125,784 - -1.0 125,784 - -0.1 125,784 - -0.0 125,784 - -1.3 125,787 + -0.9 125,787 + -0.9 125,788 - +0.1 125,788 - -0.2 125,788 - +1.0 125,818 + -0.6 125,818 + -2.0 125,818 + -0.0 125,818 + -0.8 125,818 + -1.0 125,818 + -0.5 125,818 + -0.5 125,818 + -0.8 125,818 + +1.5 125,818 + -0.6 125,819 - -1.4 125,819 - -0.5 125,819 - +0.4 125,819 - +2.1 125,819 - -0.8 125,917 + GFF821 0.16 +0.5 126,253 + GFF821 0.61 -0.9 126,253 + GFF821 0.61 -0.0 126,253 + GFF821 0.61 +1.5 126,254 - GFF821 0.62 -1.5 126,254 - GFF821 0.62 -1.0 126,350 - GFF821 0.75 -0.6 126,487 + -1.5 126,627 + -0.0 126,637 + -0.2 126,637 + -0.8 126,637 + -0.5 126,637 + +0.5 126,637 + +0.0 126,637 + -0.2 126,638 - +0.2 126,638 - -0.0 126,665 + -0.0 126,707 + -0.9 126,719 + -0.1 126,719 + +0.2 126,719 + +0.6 126,719 + -0.8 126,719 + -0.7 126,719 + -0.8 126,720 - +0.2 126,771 - +0.2 126,771 - -0.3 126,771 - -0.7 126,771 - -0.0 126,771 - +0.9 126,929 + GFF822 0.20 -0.4 126,929 + GFF822 0.20 +1.0 126,929 + GFF822 0.20 +1.5 126,929 + GFF822 0.20 -0.7 127,049 + GFF822 0.29 +0.3 127,049 + GFF822 0.29 -1.2 127,050 - GFF822 0.29 -0.6 127,050 - GFF822 0.29 -0.1 127,050 - GFF822 0.29 +0.1 127,050 - GFF822 0.29 +0.5 127,050 - GFF822 0.29 -0.6 127,262 + GFF822 0.44 -1.3 127,262 + GFF822 0.44 +0.6 127,262 + GFF822 0.44 +1.5 127,262 + GFF822 0.44 -0.0 127,262 + GFF822 0.44 -0.0 127,262 + GFF822 0.44 +0.5 127,262 + GFF822 0.44 -0.1 127,262 + GFF822 0.44 +0.1 127,262 + GFF822 0.44 -0.3 127,262 + GFF822 0.44 +0.9 127,262 + GFF822 0.44 +0.2 127,263 - GFF822 0.44 -0.0 127,263 - GFF822 0.44 -0.8 127,263 - GFF822 0.44 -0.7 127,263 - GFF822 0.44 -0.2 127,263 - GFF822 0.44 -0.4 127,263 - GFF822 0.44 -0.4 127,263 - GFF822 0.44 -0.0 127,263 - GFF822 0.44 -0.5 127,263 - GFF822 0.44 -2.8 127,263 - GFF822 0.44 +0.5 127,370 + GFF822 0.52 +0.3 127,370 + GFF822 0.52 +0.2 127,370 + GFF822 0.52 -0.8 127,370 + GFF822 0.52 -0.2 127,371 - GFF822 0.53 -0.7 127,371 - GFF822 0.53 +0.1 127,371 - GFF822 0.53 -1.1 127,371 - GFF822 0.53 -0.3 127,371 - GFF822 0.53 -1.0 127,371 - GFF822 0.53 +1.2 127,374 + GFF822 0.53 -0.5 127,455 - GFF822 0.59 -0.9 127,455 - GFF822 0.59 -0.2 127,455 - GFF822 0.59 +1.1 127,455 - GFF822 0.59 -0.3 127,455 - GFF822 0.59 -0.2 127,455 - GFF822 0.59 +1.5
Or see this region's nucleotide sequence