Experiment: no phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF750 and GFF751 are separated by 6 nucleotides GFF751 and GFF752 are separated by 36 nucleotides GFF752 and GFF753 are separated by 130 nucleotides GFF753 and GFF754 are separated by 156 nucleotides
GFF750 - Transcriptional regulator LigR, LysR family, at 13,647 to 14,924
GFF750
GFF751 - probable acetyltransferase protein, at 14,931 to 15,380
GFF751
GFF752 - hypothetical protein, at 15,417 to 15,758
GFF752
GFF753 - Methyl-accepting chemotaxis sensor/transducer protein, at 15,889 to 17,532
GFF753
GFF754 - FIG00975093: hypothetical protein, at 17,689 to 18,522
GFF754
Position (kb) 15
16
17
18 Strain fitness (log2 ratio) -2
-1
0
1
2 at 14.996 kb on - strand, within GFF751 at 14.996 kb on - strand, within GFF751 at 14.996 kb on - strand, within GFF751 at 15.046 kb on + strand, within GFF751 at 15.046 kb on + strand, within GFF751 at 15.046 kb on + strand, within GFF751 at 15.047 kb on - strand, within GFF751 at 15.152 kb on - strand, within GFF751 at 15.236 kb on - strand, within GFF751 at 15.248 kb on + strand, within GFF751 at 15.248 kb on + strand, within GFF751 at 15.249 kb on - strand, within GFF751 at 15.328 kb on + strand, within GFF751 at 15.329 kb on - strand, within GFF751 at 15.329 kb on - strand, within GFF751 at 15.372 kb on + strand at 15.372 kb on + strand at 15.372 kb on + strand at 15.372 kb on + strand at 15.373 kb on - strand at 15.536 kb on + strand, within GFF752 at 15.536 kb on + strand, within GFF752 at 15.536 kb on + strand, within GFF752 at 15.536 kb on + strand, within GFF752 at 15.536 kb on + strand, within GFF752 at 15.537 kb on - strand, within GFF752 at 15.537 kb on - strand, within GFF752 at 15.537 kb on - strand, within GFF752 at 15.537 kb on - strand, within GFF752 at 15.537 kb on - strand, within GFF752 at 15.623 kb on - strand, within GFF752 at 15.677 kb on - strand, within GFF752 at 16.812 kb on - strand, within GFF753 at 16.812 kb on - strand, within GFF753 at 17.057 kb on + strand, within GFF753 at 17.057 kb on + strand, within GFF753 at 17.057 kb on + strand, within GFF753 at 17.057 kb on + strand, within GFF753 at 17.057 kb on + strand, within GFF753 at 17.057 kb on + strand, within GFF753 at 17.058 kb on - strand, within GFF753 at 17.058 kb on - strand, within GFF753 at 17.058 kb on - strand, within GFF753 at 17.058 kb on - strand, within GFF753 at 17.160 kb on - strand, within GFF753 at 17.160 kb on - strand, within GFF753 at 17.285 kb on + strand, within GFF753 at 17.349 kb on + strand, within GFF753 at 17.350 kb on - strand, within GFF753 at 17.440 kb on + strand at 17.467 kb on + strand at 17.467 kb on + strand at 17.468 kb on - strand at 17.546 kb on + strand at 17.546 kb on + strand at 17.637 kb on - strand at 17.660 kb on + strand at 17.664 kb on + strand at 17.881 kb on + strand, within GFF754 at 17.881 kb on + strand, within GFF754 at 17.882 kb on - strand, within GFF754 at 18.000 kb on - strand, within GFF754 at 18.194 kb on + strand, within GFF754 at 18.194 kb on + strand, within GFF754 at 18.195 kb on - strand, within GFF754 at 18.195 kb on - strand, within GFF754 at 18.281 kb on + strand, within GFF754 at 18.281 kb on + strand, within GFF754 at 18.281 kb on + strand, within GFF754 at 18.323 kb on + strand, within GFF754 at 18.324 kb on - strand, within GFF754 at 18.330 kb on - strand, within GFF754 at 18.365 kb on + strand, within GFF754 at 18.365 kb on + strand, within GFF754 at 18.365 kb on + strand, within GFF754 at 18.365 kb on + strand, within GFF754 at 18.366 kb on - strand, within GFF754 at 18.366 kb on - strand, within GFF754 at 18.366 kb on - strand, within GFF754 at 18.366 kb on - strand, within GFF754 at 18.366 kb on - strand, within GFF754 at 18.366 kb on - strand, within GFF754
Per-strain Table
Position Strand Gene LocusTag Fraction no phage control remove 14,996 - GFF751 0.14 +0.7 14,996 - GFF751 0.14 +0.9 14,996 - GFF751 0.14 -1.6 15,046 + GFF751 0.26 +0.1 15,046 + GFF751 0.26 -0.3 15,046 + GFF751 0.26 -1.0 15,047 - GFF751 0.26 -0.5 15,152 - GFF751 0.49 -0.5 15,236 - GFF751 0.68 -0.7 15,248 + GFF751 0.70 +0.5 15,248 + GFF751 0.70 -1.1 15,249 - GFF751 0.71 -1.0 15,328 + GFF751 0.88 -0.0 15,329 - GFF751 0.88 +0.5 15,329 - GFF751 0.88 -0.0 15,372 + -1.0 15,372 + -0.3 15,372 + -0.3 15,372 + -0.1 15,373 - -0.5 15,536 + GFF752 0.35 -0.7 15,536 + GFF752 0.35 -0.0 15,536 + GFF752 0.35 -0.6 15,536 + GFF752 0.35 +1.8 15,536 + GFF752 0.35 -1.2 15,537 - GFF752 0.35 -2.0 15,537 - GFF752 0.35 -0.2 15,537 - GFF752 0.35 -1.4 15,537 - GFF752 0.35 -0.6 15,537 - GFF752 0.35 +0.2 15,623 - GFF752 0.60 +0.2 15,677 - GFF752 0.76 -0.2 16,812 - GFF753 0.56 -0.4 16,812 - GFF753 0.56 -1.3 17,057 + GFF753 0.71 -0.9 17,057 + GFF753 0.71 -0.5 17,057 + GFF753 0.71 -0.6 17,057 + GFF753 0.71 -1.3 17,057 + GFF753 0.71 -0.0 17,057 + GFF753 0.71 -0.4 17,058 - GFF753 0.71 -0.3 17,058 - GFF753 0.71 -1.6 17,058 - GFF753 0.71 +1.1 17,058 - GFF753 0.71 -0.0 17,160 - GFF753 0.77 -0.3 17,160 - GFF753 0.77 -0.9 17,285 + GFF753 0.85 +0.2 17,349 + GFF753 0.89 +0.6 17,350 - GFF753 0.89 -0.8 17,440 + -0.9 17,467 + +0.1 17,467 + -1.5 17,468 - -0.0 17,546 + -0.3 17,546 + -0.4 17,637 - +1.3 17,660 + -0.3 17,664 + -0.3 17,881 + GFF754 0.23 -0.2 17,881 + GFF754 0.23 +0.5 17,882 - GFF754 0.23 +0.1 18,000 - GFF754 0.37 +0.3 18,194 + GFF754 0.61 -0.2 18,194 + GFF754 0.61 -0.7 18,195 - GFF754 0.61 +0.8 18,195 - GFF754 0.61 +0.3 18,281 + GFF754 0.71 -0.2 18,281 + GFF754 0.71 +0.7 18,281 + GFF754 0.71 -1.0 18,323 + GFF754 0.76 -0.5 18,324 - GFF754 0.76 -0.0 18,330 - GFF754 0.77 +0.1 18,365 + GFF754 0.81 -2.7 18,365 + GFF754 0.81 -0.3 18,365 + GFF754 0.81 -0.5 18,365 + GFF754 0.81 -1.3 18,366 - GFF754 0.81 +0.6 18,366 - GFF754 0.81 +1.0 18,366 - GFF754 0.81 -0.3 18,366 - GFF754 0.81 +1.7 18,366 - GFF754 0.81 -0.5 18,366 - GFF754 0.81 +1.5
Or see this region's nucleotide sequence