Experiment: no phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF6517 and GFF6518 overlap by 4 nucleotides GFF6518 and GFF6519 overlap by 11 nucleotides GFF6519 and GFF6520 are separated by 29 nucleotides GFF6520 and GFF6521 are separated by 21 nucleotides
GFF6517 - Cation transport protein ChaC, at 13,288 to 13,977
GFF6517
GFF6518 - Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1), at 13,974 to 14,510
GFF6518
GFF6519 - Molybdenum cofactor cytidylyltransferase (EC 2.7.7.76), at 14,500 to 15,078
GFF6519
GFF6520 - Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5), at 15,108 to 15,761
GFF6520
GFF6521 - Auxin efflux carrier family protein, at 15,783 to 16,736
GFF6521
Position (kb) 14
15
16 Strain fitness (log2 ratio) -1
0
1
2
3 at 13.572 kb on - strand, within GFF6517 at 13.618 kb on + strand, within GFF6517 at 13.618 kb on + strand, within GFF6517 at 13.619 kb on - strand, within GFF6517 at 13.619 kb on - strand, within GFF6517 at 13.619 kb on - strand, within GFF6517 at 13.619 kb on - strand, within GFF6517 at 13.735 kb on + strand, within GFF6517 at 13.735 kb on + strand, within GFF6517 at 13.735 kb on + strand, within GFF6517 at 13.735 kb on + strand, within GFF6517 at 13.735 kb on + strand, within GFF6517 at 13.735 kb on + strand, within GFF6517 at 13.735 kb on + strand, within GFF6517 at 13.735 kb on + strand, within GFF6517 at 13.735 kb on + strand, within GFF6517 at 13.735 kb on + strand, within GFF6517 at 13.735 kb on + strand, within GFF6517 at 13.735 kb on + strand, within GFF6517 at 13.735 kb on + strand, within GFF6517 at 13.736 kb on - strand, within GFF6517 at 13.736 kb on - strand, within GFF6517 at 13.736 kb on - strand, within GFF6517 at 13.736 kb on - strand, within GFF6517 at 13.736 kb on - strand, within GFF6517 at 13.736 kb on - strand, within GFF6517 at 13.737 kb on + strand, within GFF6517 at 13.738 kb on - strand, within GFF6517 at 13.738 kb on - strand, within GFF6517 at 13.910 kb on + strand at 13.910 kb on + strand at 13.910 kb on + strand at 13.910 kb on + strand at 13.910 kb on + strand at 13.910 kb on + strand at 13.910 kb on + strand at 13.911 kb on - strand at 13.911 kb on - strand at 13.911 kb on - strand at 13.911 kb on - strand at 13.911 kb on - strand at 13.911 kb on - strand at 13.911 kb on - strand at 13.912 kb on + strand at 13.912 kb on + strand at 13.912 kb on + strand at 13.912 kb on + strand at 13.912 kb on + strand at 13.912 kb on + strand at 13.912 kb on + strand at 13.912 kb on + strand at 13.912 kb on + strand at 13.912 kb on + strand at 13.912 kb on + strand at 13.912 kb on + strand at 13.912 kb on + strand at 13.913 kb on - strand at 13.913 kb on - strand at 13.913 kb on - strand at 13.913 kb on - strand at 13.913 kb on - strand at 13.913 kb on - strand at 14.732 kb on + strand, within GFF6519 at 14.733 kb on - strand, within GFF6519 at 15.087 kb on + strand at 15.087 kb on + strand at 15.087 kb on + strand at 15.087 kb on + strand at 15.087 kb on + strand at 15.087 kb on + strand at 15.088 kb on - strand at 15.088 kb on - strand at 15.088 kb on - strand at 15.088 kb on - strand at 15.088 kb on - strand at 15.088 kb on - strand at 15.088 kb on - strand at 15.088 kb on - strand at 15.088 kb on - strand at 15.088 kb on - strand at 15.088 kb on - strand at 15.088 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction no phage control remove 13,572 - GFF6517 0.41 +0.4 13,618 + GFF6517 0.48 +0.0 13,618 + GFF6517 0.48 -0.6 13,619 - GFF6517 0.48 -0.5 13,619 - GFF6517 0.48 -0.5 13,619 - GFF6517 0.48 +0.0 13,619 - GFF6517 0.48 -0.4 13,735 + GFF6517 0.65 -0.2 13,735 + GFF6517 0.65 +0.1 13,735 + GFF6517 0.65 -0.0 13,735 + GFF6517 0.65 -0.1 13,735 + GFF6517 0.65 +0.5 13,735 + GFF6517 0.65 -0.7 13,735 + GFF6517 0.65 +0.2 13,735 + GFF6517 0.65 +1.6 13,735 + GFF6517 0.65 -0.6 13,735 + GFF6517 0.65 -1.4 13,735 + GFF6517 0.65 -1.7 13,735 + GFF6517 0.65 +0.0 13,735 + GFF6517 0.65 +0.3 13,736 - GFF6517 0.65 -0.9 13,736 - GFF6517 0.65 +0.3 13,736 - GFF6517 0.65 -0.5 13,736 - GFF6517 0.65 +0.4 13,736 - GFF6517 0.65 -0.8 13,736 - GFF6517 0.65 -0.7 13,737 + GFF6517 0.65 +0.4 13,738 - GFF6517 0.65 -0.3 13,738 - GFF6517 0.65 -0.4 13,910 + +0.1 13,910 + +0.9 13,910 + +0.2 13,910 + +1.1 13,910 + +0.9 13,910 + -0.6 13,910 + +0.6 13,911 - +0.1 13,911 - -0.1 13,911 - +1.6 13,911 - -0.5 13,911 - -1.2 13,911 - -0.1 13,911 - -0.4 13,912 + -0.8 13,912 + -0.3 13,912 + -0.7 13,912 + +0.7 13,912 + +1.0 13,912 + -0.4 13,912 + +0.2 13,912 + +1.6 13,912 + -0.8 13,912 + +0.2 13,912 + +0.0 13,912 + +0.5 13,912 + +0.3 13,913 - +2.9 13,913 - +0.3 13,913 - -0.9 13,913 - -0.6 13,913 - +0.1 13,913 - +1.2 14,732 + GFF6519 0.40 -0.2 14,733 - GFF6519 0.40 +0.6 15,087 + -0.5 15,087 + -0.4 15,087 + -0.2 15,087 + -0.9 15,087 + +0.0 15,087 + +0.4 15,088 - -0.7 15,088 - +1.0 15,088 - +0.2 15,088 - +0.3 15,088 - -0.1 15,088 - +0.4 15,088 - +0.5 15,088 - -0.8 15,088 - -0.6 15,088 - -1.2 15,088 - +1.3 15,088 - +0.3
Or see this region's nucleotide sequence