Experiment: no phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF6498 and GFF6499 are separated by 5 nucleotides GFF6499 and GFF6500 are separated by 122 nucleotides GFF6500 and GFF6501 are separated by 52 nucleotides
GFF6498 - FIG00348192: hypothetical protein, at 74,771 to 76,363
GFF6498
GFF6499 - hypothetical protein, at 76,369 to 76,848
GFF6499
GFF6500 - 2-hydroxychromene-2-carboxylate isomerase/DsbA-like thioredoxin domain, at 76,971 to 77,657
GFF6500
GFF6501 - Uncharacterized MFS-type transporter, at 77,710 to 79,119
GFF6501
Position (kb) 76
77 Strain fitness (log2 ratio) -1
0
1
2 at 75.447 kb on + strand, within GFF6498 at 75.447 kb on + strand, within GFF6498 at 75.448 kb on - strand, within GFF6498 at 75.448 kb on - strand, within GFF6498 at 75.492 kb on + strand, within GFF6498 at 75.492 kb on + strand, within GFF6498 at 75.492 kb on + strand, within GFF6498 at 75.493 kb on - strand, within GFF6498 at 75.493 kb on - strand, within GFF6498 at 75.652 kb on - strand, within GFF6498 at 75.783 kb on + strand, within GFF6498 at 75.945 kb on + strand, within GFF6498 at 75.945 kb on + strand, within GFF6498 at 75.946 kb on - strand, within GFF6498 at 75.946 kb on - strand, within GFF6498 at 75.946 kb on - strand, within GFF6498 at 76.748 kb on + strand, within GFF6499 at 76.749 kb on - strand, within GFF6499 at 76.767 kb on - strand, within GFF6499 at 76.832 kb on - strand at 76.956 kb on + strand at 76.967 kb on + strand at 76.967 kb on + strand at 76.967 kb on + strand at 76.967 kb on + strand at 76.968 kb on - strand at 77.113 kb on + strand, within GFF6500 at 77.113 kb on + strand, within GFF6500 at 77.113 kb on + strand, within GFF6500 at 77.113 kb on + strand, within GFF6500 at 77.114 kb on - strand, within GFF6500 at 77.114 kb on - strand, within GFF6500 at 77.114 kb on - strand, within GFF6500 at 77.114 kb on - strand, within GFF6500 at 77.114 kb on - strand, within GFF6500 at 77.114 kb on - strand, within GFF6500 at 77.114 kb on - strand, within GFF6500 at 77.114 kb on - strand, within GFF6500 at 77.254 kb on + strand, within GFF6500 at 77.254 kb on + strand, within GFF6500 at 77.255 kb on - strand, within GFF6500 at 77.347 kb on + strand, within GFF6500 at 77.347 kb on + strand, within GFF6500 at 77.347 kb on + strand, within GFF6500 at 77.347 kb on + strand, within GFF6500 at 77.450 kb on - strand, within GFF6500 at 77.450 kb on - strand, within GFF6500 at 77.768 kb on + strand at 77.769 kb on - strand at 77.769 kb on - strand at 77.769 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction no phage control remove 75,447 + GFF6498 0.42 -0.8 75,447 + GFF6498 0.42 +0.6 75,448 - GFF6498 0.42 -0.4 75,448 - GFF6498 0.42 -1.4 75,492 + GFF6498 0.45 +0.3 75,492 + GFF6498 0.45 -0.8 75,492 + GFF6498 0.45 -0.3 75,493 - GFF6498 0.45 -0.3 75,493 - GFF6498 0.45 +0.7 75,652 - GFF6498 0.55 -0.1 75,783 + GFF6498 0.64 -0.3 75,945 + GFF6498 0.74 +0.0 75,945 + GFF6498 0.74 -0.4 75,946 - GFF6498 0.74 -0.3 75,946 - GFF6498 0.74 -0.4 75,946 - GFF6498 0.74 -0.5 76,748 + GFF6499 0.79 -1.2 76,749 - GFF6499 0.79 -1.2 76,767 - GFF6499 0.83 -0.8 76,832 - -0.4 76,956 + -0.5 76,967 + +0.4 76,967 + +0.0 76,967 + -0.4 76,967 + -0.4 76,968 - +2.0 77,113 + GFF6500 0.21 -0.7 77,113 + GFF6500 0.21 +0.2 77,113 + GFF6500 0.21 +0.4 77,113 + GFF6500 0.21 +0.3 77,114 - GFF6500 0.21 -0.7 77,114 - GFF6500 0.21 -0.9 77,114 - GFF6500 0.21 -1.1 77,114 - GFF6500 0.21 -1.2 77,114 - GFF6500 0.21 -0.6 77,114 - GFF6500 0.21 -0.0 77,114 - GFF6500 0.21 +0.4 77,114 - GFF6500 0.21 -1.0 77,254 + GFF6500 0.41 -0.6 77,254 + GFF6500 0.41 +0.8 77,255 - GFF6500 0.41 -0.4 77,347 + GFF6500 0.55 -0.1 77,347 + GFF6500 0.55 -0.0 77,347 + GFF6500 0.55 -0.5 77,347 + GFF6500 0.55 -0.4 77,450 - GFF6500 0.70 -0.6 77,450 - GFF6500 0.70 -0.4 77,768 + -1.1 77,769 - -0.7 77,769 - +1.1 77,769 - +0.0
Or see this region's nucleotide sequence