Experiment: no phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF644 and GFF645 are separated by 15 nucleotides GFF645 and GFF646 are separated by 11 nucleotides GFF646 and GFF647 are separated by 148 nucleotides GFF647 and GFF648 are separated by 5 nucleotides
GFF644 - ABC transporter, substrate-binding protein (cluster 6, sulfate/molybdate/tungstate/phosphate), at 694,454 to 695,275
GFF644
GFF645 - hypothetical protein, at 695,291 to 696,193
GFF645
GFF646 - no description, at 696,205 to 696,552
GFF646
GFF647 - Two-component system response regulator QseB, at 696,701 to 697,390
GFF647
GFF648 - integral membrane sensor signal transduction histidine kinase, at 697,396 to 698,895
GFF648
Position (kb) 696
697 Strain fitness (log2 ratio) -2
-1
0
1 at 695.207 kb on + strand at 695.239 kb on + strand at 695.293 kb on - strand at 695.379 kb on + strand at 695.448 kb on + strand, within GFF645 at 695.448 kb on + strand, within GFF645 at 695.449 kb on - strand, within GFF645 at 695.449 kb on - strand, within GFF645 at 695.449 kb on - strand, within GFF645 at 695.763 kb on + strand, within GFF645 at 695.922 kb on + strand, within GFF645 at 695.922 kb on + strand, within GFF645 at 695.922 kb on + strand, within GFF645 at 695.923 kb on - strand, within GFF645 at 695.923 kb on - strand, within GFF645 at 695.923 kb on - strand, within GFF645 at 696.015 kb on + strand, within GFF645 at 696.015 kb on + strand, within GFF645 at 696.051 kb on + strand, within GFF645 at 696.067 kb on - strand, within GFF645 at 696.067 kb on - strand, within GFF645 at 696.067 kb on - strand, within GFF645 at 696.067 kb on - strand, within GFF645 at 696.111 kb on + strand at 696.111 kb on + strand at 696.297 kb on - strand, within GFF646 at 696.311 kb on + strand, within GFF646 at 696.539 kb on + strand at 696.539 kb on + strand at 696.540 kb on - strand at 696.688 kb on + strand at 696.688 kb on + strand at 696.689 kb on - strand at 696.689 kb on - strand at 696.992 kb on + strand, within GFF647 at 696.992 kb on + strand, within GFF647 at 696.993 kb on - strand, within GFF647 at 696.993 kb on - strand, within GFF647 at 697.059 kb on - strand, within GFF647 at 697.173 kb on + strand, within GFF647 at 697.174 kb on - strand, within GFF647 at 697.319 kb on + strand, within GFF647 at 697.319 kb on + strand, within GFF647 at 697.319 kb on + strand, within GFF647 at 697.320 kb on - strand, within GFF647 at 697.320 kb on - strand, within GFF647 at 697.320 kb on - strand, within GFF647 at 697.355 kb on + strand at 697.356 kb on - strand at 697.356 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction no phage control remove 695,207 + +0.2 695,239 + -0.5 695,293 - -0.8 695,379 + -1.4 695,448 + GFF645 0.17 +0.2 695,448 + GFF645 0.17 -1.9 695,449 - GFF645 0.17 -0.3 695,449 - GFF645 0.17 +1.1 695,449 - GFF645 0.17 -0.4 695,763 + GFF645 0.52 +0.0 695,922 + GFF645 0.70 -0.4 695,922 + GFF645 0.70 -0.3 695,922 + GFF645 0.70 -0.7 695,923 - GFF645 0.70 -1.8 695,923 - GFF645 0.70 -0.7 695,923 - GFF645 0.70 +0.6 696,015 + GFF645 0.80 +0.1 696,015 + GFF645 0.80 +0.9 696,051 + GFF645 0.84 +0.4 696,067 - GFF645 0.86 -1.1 696,067 - GFF645 0.86 -0.8 696,067 - GFF645 0.86 +0.8 696,067 - GFF645 0.86 -0.0 696,111 + -2.5 696,111 + -0.9 696,297 - GFF646 0.26 -1.6 696,311 + GFF646 0.30 -0.7 696,539 + -0.0 696,539 + -0.1 696,540 - -1.1 696,688 + +0.0 696,688 + -0.8 696,689 - +0.3 696,689 - -0.2 696,992 + GFF647 0.42 +0.4 696,992 + GFF647 0.42 -0.5 696,993 - GFF647 0.42 -0.3 696,993 - GFF647 0.42 -1.5 697,059 - GFF647 0.52 +0.3 697,173 + GFF647 0.68 -0.5 697,174 - GFF647 0.69 -0.6 697,319 + GFF647 0.90 +1.6 697,319 + GFF647 0.90 +0.1 697,319 + GFF647 0.90 +0.1 697,320 - GFF647 0.90 -0.9 697,320 - GFF647 0.90 -0.3 697,320 - GFF647 0.90 -0.8 697,355 + -0.0 697,356 - +0.4 697,356 - +0.0
Or see this region's nucleotide sequence