Experiment: no phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF6158 and GFF6159 are separated by 34 nucleotides GFF6159 and GFF6160 are separated by 19 nucleotides
GFF6158 - carbon monoxide dehydrogenase E protein, at 64,013 to 65,227
GFF6158
GFF6159 - carbon monoxide dehydrogenase G protein, at 65,262 to 65,891
GFF6159
GFF6160 - Dehydrogenase molybdenum cofactor insertion protein, XdhC/CoxF family, at 65,911 to 66,933
GFF6160
Position (kb) 65
66 Strain fitness (log2 ratio) -2
-1
0
1 at 64.650 kb on + strand, within GFF6158 at 64.651 kb on - strand, within GFF6158 at 64.651 kb on - strand, within GFF6158 at 64.733 kb on + strand, within GFF6158 at 64.734 kb on - strand, within GFF6158 at 65.391 kb on + strand, within GFF6159 at 65.391 kb on + strand, within GFF6159 at 65.392 kb on - strand, within GFF6159 at 65.392 kb on - strand, within GFF6159 at 65.392 kb on - strand, within GFF6159 at 65.481 kb on + strand, within GFF6159 at 65.482 kb on - strand, within GFF6159 at 65.482 kb on - strand, within GFF6159 at 65.577 kb on - strand, within GFF6159 at 65.631 kb on + strand, within GFF6159 at 65.631 kb on + strand, within GFF6159 at 65.631 kb on + strand, within GFF6159 at 66.109 kb on + strand, within GFF6160 at 66.109 kb on + strand, within GFF6160 at 66.173 kb on - strand, within GFF6160 at 66.454 kb on + strand, within GFF6160 at 66.683 kb on - strand, within GFF6160 at 66.683 kb on - strand, within GFF6160 at 66.683 kb on - strand, within GFF6160 at 66.796 kb on + strand, within GFF6160 at 66.796 kb on + strand, within GFF6160 at 66.796 kb on + strand, within GFF6160 at 66.796 kb on + strand, within GFF6160 at 66.797 kb on - strand, within GFF6160 at 66.797 kb on - strand, within GFF6160 at 66.797 kb on - strand, within GFF6160
Per-strain Table
Position Strand Gene LocusTag Fraction no phage control remove 64,650 + GFF6158 0.52 -0.1 64,651 - GFF6158 0.53 -0.5 64,651 - GFF6158 0.53 +0.3 64,733 + GFF6158 0.59 -1.8 64,734 - GFF6158 0.59 +0.4 65,391 + GFF6159 0.20 -0.4 65,391 + GFF6159 0.20 -1.0 65,392 - GFF6159 0.21 -0.0 65,392 - GFF6159 0.21 -0.9 65,392 - GFF6159 0.21 -0.1 65,481 + GFF6159 0.35 +1.7 65,482 - GFF6159 0.35 -0.9 65,482 - GFF6159 0.35 +1.7 65,577 - GFF6159 0.50 -1.0 65,631 + GFF6159 0.59 +0.3 65,631 + GFF6159 0.59 +0.1 65,631 + GFF6159 0.59 -0.5 66,109 + GFF6160 0.19 -0.9 66,109 + GFF6160 0.19 -0.3 66,173 - GFF6160 0.26 -0.4 66,454 + GFF6160 0.53 +1.2 66,683 - GFF6160 0.75 +0.8 66,683 - GFF6160 0.75 -0.3 66,683 - GFF6160 0.75 +0.1 66,796 + GFF6160 0.87 -0.9 66,796 + GFF6160 0.87 -0.3 66,796 + GFF6160 0.87 -0.4 66,796 + GFF6160 0.87 -0.3 66,797 - GFF6160 0.87 +0.0 66,797 - GFF6160 0.87 -0.7 66,797 - GFF6160 0.87 +0.6
Or see this region's nucleotide sequence