Experiment: no phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF6080 and GFF6081 are separated by 88 nucleotides GFF6081 and GFF6082 are separated by 43 nucleotides
GFF6080 - Putative deoxyribonuclease YjjV, at 142,114 to 142,974
GFF6080
GFF6081 - Peptidase S1 and S6, chymotrypsin/Hap, at 143,063 to 144,082
GFF6081
GFF6082 - MoxR-like ATPase in aerotolerance operon, at 144,126 to 145,139
GFF6082
Position (kb) 143
144
145 Strain fitness (log2 ratio) -2
-1
0
1 at 142.115 kb on + strand at 142.115 kb on + strand at 142.115 kb on + strand at 142.116 kb on - strand at 142.159 kb on + strand at 142.319 kb on + strand, within GFF6080 at 142.320 kb on - strand, within GFF6080 at 142.585 kb on + strand, within GFF6080 at 142.585 kb on + strand, within GFF6080 at 142.585 kb on + strand, within GFF6080 at 142.586 kb on - strand, within GFF6080 at 142.586 kb on - strand, within GFF6080 at 142.586 kb on - strand, within GFF6080 at 142.670 kb on + strand, within GFF6080 at 142.671 kb on - strand, within GFF6080 at 142.671 kb on - strand, within GFF6080 at 142.671 kb on - strand, within GFF6080 at 142.799 kb on + strand, within GFF6080 at 142.799 kb on + strand, within GFF6080 at 142.906 kb on + strand at 142.906 kb on + strand at 142.969 kb on - strand at 142.969 kb on - strand at 143.019 kb on + strand at 143.019 kb on + strand at 143.019 kb on + strand at 143.020 kb on - strand at 143.041 kb on + strand at 143.081 kb on + strand at 143.081 kb on + strand at 143.082 kb on - strand at 143.435 kb on + strand, within GFF6081 at 143.435 kb on + strand, within GFF6081 at 143.435 kb on + strand, within GFF6081 at 143.436 kb on - strand, within GFF6081 at 144.189 kb on + strand at 144.402 kb on + strand, within GFF6082 at 144.402 kb on + strand, within GFF6082 at 144.402 kb on + strand, within GFF6082 at 144.402 kb on + strand, within GFF6082 at 144.403 kb on - strand, within GFF6082 at 144.618 kb on + strand, within GFF6082 at 144.618 kb on + strand, within GFF6082 at 144.618 kb on + strand, within GFF6082 at 144.619 kb on - strand, within GFF6082 at 144.792 kb on + strand, within GFF6082 at 144.792 kb on + strand, within GFF6082 at 144.792 kb on + strand, within GFF6082 at 144.792 kb on + strand, within GFF6082 at 144.792 kb on + strand, within GFF6082 at 144.792 kb on + strand, within GFF6082 at 144.793 kb on - strand, within GFF6082 at 144.967 kb on - strand, within GFF6082 at 144.967 kb on - strand, within GFF6082 at 145.032 kb on + strand, within GFF6082 at 145.032 kb on + strand, within GFF6082 at 145.033 kb on - strand, within GFF6082 at 145.033 kb on - strand, within GFF6082
Per-strain Table
Position Strand Gene LocusTag Fraction no phage control remove 142,115 + +1.0 142,115 + -1.9 142,115 + -1.1 142,116 - +0.4 142,159 + +0.5 142,319 + GFF6080 0.24 -0.3 142,320 - GFF6080 0.24 +1.7 142,585 + GFF6080 0.55 +0.1 142,585 + GFF6080 0.55 -1.1 142,585 + GFF6080 0.55 -0.5 142,586 - GFF6080 0.55 -0.6 142,586 - GFF6080 0.55 +0.1 142,586 - GFF6080 0.55 -0.2 142,670 + GFF6080 0.65 +0.0 142,671 - GFF6080 0.65 +0.7 142,671 - GFF6080 0.65 +0.0 142,671 - GFF6080 0.65 -0.4 142,799 + GFF6080 0.80 -0.7 142,799 + GFF6080 0.80 -0.2 142,906 + +0.4 142,906 + -0.6 142,969 - -0.0 142,969 - -0.6 143,019 + -0.4 143,019 + +0.1 143,019 + +0.6 143,020 - -0.6 143,041 + -0.3 143,081 + -1.9 143,081 + -0.0 143,082 - -0.2 143,435 + GFF6081 0.36 +0.1 143,435 + GFF6081 0.36 +0.3 143,435 + GFF6081 0.36 +1.1 143,436 - GFF6081 0.37 -0.6 144,189 + -1.9 144,402 + GFF6082 0.27 -2.6 144,402 + GFF6082 0.27 -0.3 144,402 + GFF6082 0.27 +0.9 144,402 + GFF6082 0.27 -1.6 144,403 - GFF6082 0.27 -0.6 144,618 + GFF6082 0.49 -0.3 144,618 + GFF6082 0.49 -0.2 144,618 + GFF6082 0.49 -0.8 144,619 - GFF6082 0.49 -0.9 144,792 + GFF6082 0.66 -0.4 144,792 + GFF6082 0.66 -1.2 144,792 + GFF6082 0.66 -0.8 144,792 + GFF6082 0.66 -0.1 144,792 + GFF6082 0.66 -0.1 144,792 + GFF6082 0.66 -1.9 144,793 - GFF6082 0.66 +1.5 144,967 - GFF6082 0.83 +0.9 144,967 - GFF6082 0.83 -0.6 145,032 + GFF6082 0.89 -2.3 145,032 + GFF6082 0.89 +0.5 145,033 - GFF6082 0.89 +0.0 145,033 - GFF6082 0.89 -0.4
Or see this region's nucleotide sequence