Experiment: no phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4899 and GFF4900 are separated by 121 nucleotides GFF4900 and GFF4901 are separated by 138 nucleotides GFF4901 and GFF4902 are separated by 765 nucleotides
GFF4899 - Transcriptional regulator, Crp/Fnr family, at 265,270 to 265,920
GFF4899
GFF4900 - no description, at 266,042 to 266,299
GFF4900
GFF4901 - no description, at 266,438 to 266,692
GFF4901
GFF4902 - hypothetical protein, at 267,458 to 268,879
GFF4902
Position (kb) 266
267 Strain fitness (log2 ratio) -2
-1
0
1
2 at 265.443 kb on - strand, within GFF4899 at 265.475 kb on - strand, within GFF4899 at 265.519 kb on + strand, within GFF4899 at 265.519 kb on + strand, within GFF4899 at 265.690 kb on + strand, within GFF4899 at 265.690 kb on + strand, within GFF4899 at 265.690 kb on + strand, within GFF4899 at 265.690 kb on + strand, within GFF4899 at 265.690 kb on + strand, within GFF4899 at 265.690 kb on + strand, within GFF4899 at 265.691 kb on - strand, within GFF4899 at 265.691 kb on - strand, within GFF4899 at 265.691 kb on - strand, within GFF4899 at 265.691 kb on - strand, within GFF4899 at 265.691 kb on - strand, within GFF4899 at 265.691 kb on - strand, within GFF4899 at 265.691 kb on - strand, within GFF4899 at 265.691 kb on - strand, within GFF4899 at 265.691 kb on - strand, within GFF4899 at 265.691 kb on - strand, within GFF4899 at 265.691 kb on - strand, within GFF4899 at 265.717 kb on + strand, within GFF4899 at 265.753 kb on + strand, within GFF4899 at 265.753 kb on + strand, within GFF4899 at 265.754 kb on - strand, within GFF4899 at 265.754 kb on - strand, within GFF4899 at 265.754 kb on - strand, within GFF4899 at 265.754 kb on - strand, within GFF4899 at 265.918 kb on + strand at 265.918 kb on + strand at 265.918 kb on + strand at 265.918 kb on + strand at 265.919 kb on - strand at 265.919 kb on - strand at 265.919 kb on - strand at 265.919 kb on - strand at 265.919 kb on - strand at 265.986 kb on + strand at 265.986 kb on + strand at 265.986 kb on + strand at 265.987 kb on - strand at 265.987 kb on - strand at 265.987 kb on - strand at 265.987 kb on - strand at 265.989 kb on + strand at 265.989 kb on + strand at 265.989 kb on + strand at 265.989 kb on + strand at 265.989 kb on + strand at 265.989 kb on + strand at 265.990 kb on - strand at 265.990 kb on - strand at 265.990 kb on - strand at 265.990 kb on - strand at 266.000 kb on + strand at 266.000 kb on + strand at 266.000 kb on + strand at 266.000 kb on + strand at 266.000 kb on + strand at 266.001 kb on - strand at 266.001 kb on - strand at 266.001 kb on - strand at 266.007 kb on + strand at 266.007 kb on + strand at 266.007 kb on + strand at 266.007 kb on + strand at 266.007 kb on + strand at 266.007 kb on + strand at 266.007 kb on + strand at 266.007 kb on + strand at 266.007 kb on + strand at 266.007 kb on + strand at 266.007 kb on + strand at 266.008 kb on - strand at 266.008 kb on - strand at 266.008 kb on - strand at 266.008 kb on - strand at 266.008 kb on - strand at 266.008 kb on - strand at 266.030 kb on + strand at 266.030 kb on + strand at 266.030 kb on + strand at 266.030 kb on + strand at 266.105 kb on - strand, within GFF4900 at 266.403 kb on + strand at 266.403 kb on + strand at 266.404 kb on - strand at 266.404 kb on - strand at 266.404 kb on - strand at 266.404 kb on - strand at 266.475 kb on + strand, within GFF4901 at 266.475 kb on + strand, within GFF4901 at 266.476 kb on - strand, within GFF4901 at 266.476 kb on - strand, within GFF4901 at 266.476 kb on - strand, within GFF4901 at 266.476 kb on - strand, within GFF4901 at 266.476 kb on - strand, within GFF4901 at 266.496 kb on + strand, within GFF4901 at 266.496 kb on + strand, within GFF4901 at 266.496 kb on + strand, within GFF4901 at 266.497 kb on - strand, within GFF4901 at 266.497 kb on - strand, within GFF4901 at 266.497 kb on - strand, within GFF4901 at 266.497 kb on - strand, within GFF4901 at 266.497 kb on - strand, within GFF4901 at 266.498 kb on + strand, within GFF4901 at 266.498 kb on + strand, within GFF4901 at 266.498 kb on + strand, within GFF4901 at 266.498 kb on + strand, within GFF4901 at 266.498 kb on + strand, within GFF4901 at 266.499 kb on - strand, within GFF4901 at 266.499 kb on - strand, within GFF4901 at 266.499 kb on - strand, within GFF4901 at 266.499 kb on - strand, within GFF4901 at 266.528 kb on + strand, within GFF4901 at 266.528 kb on + strand, within GFF4901 at 266.652 kb on - strand, within GFF4901 at 266.761 kb on + strand at 266.761 kb on + strand at 266.761 kb on + strand at 266.761 kb on + strand at 266.761 kb on + strand at 266.761 kb on + strand at 266.761 kb on + strand at 266.761 kb on + strand at 266.761 kb on + strand at 266.761 kb on + strand at 266.761 kb on + strand at 266.761 kb on + strand at 266.761 kb on + strand at 266.761 kb on + strand at 266.761 kb on + strand at 266.761 kb on + strand at 266.761 kb on + strand at 266.761 kb on + strand at 266.761 kb on + strand at 266.762 kb on - strand at 266.762 kb on - strand at 266.762 kb on - strand at 266.762 kb on - strand at 266.762 kb on - strand at 266.762 kb on - strand at 266.762 kb on - strand at 266.762 kb on - strand at 266.762 kb on - strand at 266.762 kb on - strand at 266.762 kb on - strand at 266.762 kb on - strand at 266.762 kb on - strand at 266.762 kb on - strand at 266.762 kb on - strand at 266.780 kb on + strand at 266.780 kb on + strand at 266.780 kb on + strand at 266.780 kb on + strand at 266.780 kb on + strand at 266.780 kb on + strand at 266.780 kb on + strand at 266.780 kb on + strand at 266.780 kb on + strand at 266.780 kb on + strand at 266.780 kb on + strand at 266.780 kb on + strand at 266.780 kb on + strand at 266.781 kb on - strand at 266.781 kb on - strand at 266.781 kb on - strand at 266.781 kb on - strand at 266.781 kb on - strand at 266.781 kb on - strand at 266.781 kb on - strand at 266.781 kb on - strand at 266.781 kb on - strand at 266.781 kb on - strand at 266.781 kb on - strand at 266.781 kb on - strand at 266.913 kb on - strand at 266.980 kb on + strand at 266.981 kb on - strand at 266.981 kb on - strand at 266.981 kb on - strand at 267.031 kb on + strand at 267.031 kb on + strand at 267.032 kb on - strand at 267.032 kb on - strand at 267.032 kb on - strand at 267.036 kb on + strand at 267.036 kb on + strand at 267.036 kb on + strand at 267.036 kb on + strand at 267.036 kb on + strand at 267.036 kb on + strand at 267.036 kb on + strand at 267.037 kb on - strand at 267.037 kb on - strand at 267.037 kb on - strand at 267.037 kb on - strand at 267.043 kb on + strand at 267.043 kb on + strand at 267.044 kb on - strand at 267.046 kb on + strand at 267.047 kb on - strand at 267.072 kb on + strand at 267.073 kb on - strand at 267.073 kb on - strand at 267.073 kb on - strand at 267.120 kb on + strand at 267.120 kb on + strand at 267.120 kb on + strand at 267.120 kb on + strand at 267.120 kb on + strand at 267.120 kb on + strand at 267.120 kb on + strand at 267.121 kb on - strand at 267.121 kb on - strand at 267.121 kb on - strand at 267.121 kb on - strand at 267.121 kb on - strand at 267.121 kb on - strand at 267.121 kb on - strand at 267.121 kb on - strand at 267.198 kb on + strand at 267.198 kb on + strand at 267.198 kb on + strand at 267.199 kb on - strand at 267.199 kb on - strand at 267.199 kb on - strand at 267.680 kb on + strand, within GFF4902 at 267.680 kb on + strand, within GFF4902 at 267.680 kb on + strand, within GFF4902 at 267.680 kb on + strand, within GFF4902 at 267.680 kb on + strand, within GFF4902 at 267.680 kb on + strand, within GFF4902 at 267.681 kb on - strand, within GFF4902 at 267.681 kb on - strand, within GFF4902 at 267.681 kb on - strand, within GFF4902
Per-strain Table
Position Strand Gene LocusTag Fraction no phage control remove 265,443 - GFF4899 0.27 -0.9 265,475 - GFF4899 0.31 -1.5 265,519 + GFF4899 0.38 -0.4 265,519 + GFF4899 0.38 +0.3 265,690 + GFF4899 0.65 -0.1 265,690 + GFF4899 0.65 -1.0 265,690 + GFF4899 0.65 -0.4 265,690 + GFF4899 0.65 +1.1 265,690 + GFF4899 0.65 +0.4 265,690 + GFF4899 0.65 -0.4 265,691 - GFF4899 0.65 -0.5 265,691 - GFF4899 0.65 +0.8 265,691 - GFF4899 0.65 -0.6 265,691 - GFF4899 0.65 +0.2 265,691 - GFF4899 0.65 +1.2 265,691 - GFF4899 0.65 +0.3 265,691 - GFF4899 0.65 -2.1 265,691 - GFF4899 0.65 +0.0 265,691 - GFF4899 0.65 -0.8 265,691 - GFF4899 0.65 -0.7 265,691 - GFF4899 0.65 -1.3 265,717 + GFF4899 0.69 -0.8 265,753 + GFF4899 0.74 -0.3 265,753 + GFF4899 0.74 -0.8 265,754 - GFF4899 0.74 +0.5 265,754 - GFF4899 0.74 -1.7 265,754 - GFF4899 0.74 +0.2 265,754 - GFF4899 0.74 +1.3 265,918 + +0.6 265,918 + +0.0 265,918 + -0.0 265,918 + -0.9 265,919 - -0.2 265,919 - +0.0 265,919 - +0.4 265,919 - -0.7 265,919 - -1.3 265,986 + -0.1 265,986 + -0.1 265,986 + -0.1 265,987 - +0.6 265,987 - -0.1 265,987 - -0.6 265,987 - -0.5 265,989 + +0.3 265,989 + -0.3 265,989 + -0.2 265,989 + -0.4 265,989 + -0.7 265,989 + -0.9 265,990 - +1.1 265,990 - +0.8 265,990 - -0.0 265,990 - +0.1 266,000 + -0.9 266,000 + -0.7 266,000 + -0.7 266,000 + -1.1 266,000 + +0.7 266,001 - +0.3 266,001 - +0.7 266,001 - -0.5 266,007 + +0.3 266,007 + +0.3 266,007 + -0.4 266,007 + -1.5 266,007 + -0.8 266,007 + -1.8 266,007 + -1.8 266,007 + -0.6 266,007 + -0.6 266,007 + -1.9 266,007 + -1.2 266,008 - -0.1 266,008 - +0.5 266,008 - -0.3 266,008 - -0.0 266,008 - -0.5 266,008 - -0.2 266,030 + -1.4 266,030 + +0.1 266,030 + -0.6 266,030 + -0.6 266,105 - GFF4900 0.24 -2.3 266,403 + -1.9 266,403 + +1.2 266,404 - -0.3 266,404 - +0.9 266,404 - +0.4 266,404 - -0.1 266,475 + GFF4901 0.15 -0.4 266,475 + GFF4901 0.15 +0.4 266,476 - GFF4901 0.15 +0.1 266,476 - GFF4901 0.15 +0.6 266,476 - GFF4901 0.15 -0.0 266,476 - GFF4901 0.15 -0.7 266,476 - GFF4901 0.15 +1.9 266,496 + GFF4901 0.23 -0.1 266,496 + GFF4901 0.23 -0.2 266,496 + GFF4901 0.23 +0.7 266,497 - GFF4901 0.23 -1.1 266,497 - GFF4901 0.23 +0.8 266,497 - GFF4901 0.23 -0.6 266,497 - GFF4901 0.23 -0.1 266,497 - GFF4901 0.23 -0.1 266,498 + GFF4901 0.24 -0.4 266,498 + GFF4901 0.24 +2.0 266,498 + GFF4901 0.24 -0.0 266,498 + GFF4901 0.24 +0.8 266,498 + GFF4901 0.24 +0.7 266,499 - GFF4901 0.24 +0.2 266,499 - GFF4901 0.24 +0.0 266,499 - GFF4901 0.24 -0.3 266,499 - GFF4901 0.24 -0.3 266,528 + GFF4901 0.35 -0.6 266,528 + GFF4901 0.35 +0.3 266,652 - GFF4901 0.84 -1.2 266,761 + +0.4 266,761 + +0.3 266,761 + +0.2 266,761 + -0.1 266,761 + -0.9 266,761 + +0.5 266,761 + -0.9 266,761 + -0.3 266,761 + +0.2 266,761 + +0.1 266,761 + +1.5 266,761 + -0.3 266,761 + +0.8 266,761 + -1.0 266,761 + +0.2 266,761 + +0.1 266,761 + +0.9 266,761 + +0.2 266,761 + -0.8 266,762 - +0.5 266,762 - +0.4 266,762 - -1.0 266,762 - -0.7 266,762 - -2.7 266,762 - +0.1 266,762 - -0.6 266,762 - -0.7 266,762 - -0.0 266,762 - +0.3 266,762 - +0.3 266,762 - -0.8 266,762 - -0.4 266,762 - -0.7 266,762 - -0.7 266,780 + +0.9 266,780 + -0.9 266,780 + -1.0 266,780 + +0.4 266,780 + +0.3 266,780 + -0.5 266,780 + -0.1 266,780 + +0.2 266,780 + -0.6 266,780 + -0.5 266,780 + -0.5 266,780 + +2.7 266,780 + +0.4 266,781 - -0.6 266,781 - -0.6 266,781 - +0.3 266,781 - -0.1 266,781 - -0.4 266,781 - -1.1 266,781 - -0.7 266,781 - -0.4 266,781 - +0.4 266,781 - -0.3 266,781 - +0.0 266,781 - -1.1 266,913 - +0.9 266,980 + -0.1 266,981 - -0.4 266,981 - +1.3 266,981 - +0.7 267,031 + +2.3 267,031 + +0.9 267,032 - -0.1 267,032 - +0.1 267,032 - +0.3 267,036 + -0.3 267,036 + -0.6 267,036 + +0.3 267,036 + -0.4 267,036 + -0.4 267,036 + +0.3 267,036 + +0.2 267,037 - +0.3 267,037 - -0.9 267,037 - -0.1 267,037 - -1.7 267,043 + -0.3 267,043 + -0.5 267,044 - -0.1 267,046 + +1.5 267,047 - -0.4 267,072 + -0.5 267,073 - -0.4 267,073 - -0.2 267,073 - -0.1 267,120 + -0.2 267,120 + +0.2 267,120 + -0.1 267,120 + +0.1 267,120 + -0.3 267,120 + -0.4 267,120 + +0.2 267,121 - +0.1 267,121 - -0.2 267,121 - -0.9 267,121 - -0.0 267,121 - -1.5 267,121 - -0.5 267,121 - -0.8 267,121 - -0.2 267,198 + +0.0 267,198 + -0.3 267,198 + -0.7 267,199 - -0.5 267,199 - -0.4 267,199 - -0.6 267,680 + GFF4902 0.16 -0.9 267,680 + GFF4902 0.16 -1.5 267,680 + GFF4902 0.16 +0.3 267,680 + GFF4902 0.16 +0.2 267,680 + GFF4902 0.16 -0.9 267,680 + GFF4902 0.16 -0.0 267,681 - GFF4902 0.16 -1.3 267,681 - GFF4902 0.16 -1.2 267,681 - GFF4902 0.16 +0.5
Or see this region's nucleotide sequence