Experiment: no phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3248 and GFF3249 are separated by 181 nucleotides GFF3249 and GFF3250 overlap by 4 nucleotides GFF3250 and GFF3251 are separated by 296 nucleotides
GFF3248 - NADP-dependent malic enzyme (EC 1.1.1.40), at 63,622 to 65,970
GFF3248
GFF3249 - Guanyl-specific ribonuclease (EC 3.1.27.3), at 66,152 to 66,565
GFF3249
GFF3250 - Barstar, ribonuclease (Barnase) inhibitor, at 66,562 to 67,041
GFF3250
GFF3251 - SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182), at 67,338 to 68,105
GFF3251
Position (kb) 66
67
68 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 65.805 kb on + strand at 65.805 kb on + strand at 65.805 kb on + strand at 65.805 kb on + strand at 65.806 kb on - strand at 65.806 kb on - strand at 65.812 kb on + strand at 65.813 kb on - strand at 65.968 kb on + strand at 65.968 kb on + strand at 65.968 kb on + strand at 65.968 kb on + strand at 65.969 kb on - strand at 65.969 kb on - strand at 65.969 kb on - strand at 65.969 kb on - strand at 65.973 kb on + strand at 65.973 kb on + strand at 65.973 kb on + strand at 65.973 kb on + strand at 65.973 kb on + strand at 65.974 kb on - strand at 65.974 kb on - strand at 65.974 kb on - strand at 65.998 kb on + strand at 65.998 kb on + strand at 65.999 kb on - strand at 65.999 kb on - strand at 66.051 kb on + strand at 66.051 kb on + strand at 66.161 kb on + strand at 66.161 kb on + strand at 66.161 kb on + strand at 66.161 kb on + strand at 66.162 kb on - strand at 66.162 kb on - strand at 66.323 kb on + strand, within GFF3249 at 66.323 kb on + strand, within GFF3249 at 66.323 kb on + strand, within GFF3249 at 66.323 kb on + strand, within GFF3249 at 66.323 kb on + strand, within GFF3249 at 66.323 kb on + strand, within GFF3249 at 66.323 kb on + strand, within GFF3249 at 66.323 kb on + strand, within GFF3249 at 66.323 kb on + strand, within GFF3249 at 66.323 kb on + strand, within GFF3249 at 66.323 kb on + strand, within GFF3249 at 66.323 kb on + strand, within GFF3249 at 66.323 kb on + strand, within GFF3249 at 66.323 kb on + strand, within GFF3249 at 66.323 kb on + strand, within GFF3249 at 66.323 kb on + strand, within GFF3249 at 66.323 kb on + strand, within GFF3249 at 66.323 kb on + strand, within GFF3249 at 66.323 kb on + strand, within GFF3249 at 66.323 kb on + strand, within GFF3249 at 66.323 kb on + strand, within GFF3249 at 66.324 kb on - strand, within GFF3249 at 66.324 kb on - strand, within GFF3249 at 66.324 kb on - strand, within GFF3249 at 66.324 kb on - strand, within GFF3249 at 66.324 kb on - strand, within GFF3249 at 66.324 kb on - strand, within GFF3249 at 66.324 kb on - strand, within GFF3249 at 66.356 kb on + strand, within GFF3249 at 66.356 kb on + strand, within GFF3249 at 66.356 kb on + strand, within GFF3249 at 66.357 kb on - strand, within GFF3249 at 66.375 kb on + strand, within GFF3249 at 66.375 kb on + strand, within GFF3249 at 66.375 kb on + strand, within GFF3249 at 66.375 kb on + strand, within GFF3249 at 66.375 kb on + strand, within GFF3249 at 66.375 kb on + strand, within GFF3249 at 66.375 kb on + strand, within GFF3249 at 66.375 kb on + strand, within GFF3249 at 66.375 kb on + strand, within GFF3249 at 66.375 kb on + strand, within GFF3249 at 66.375 kb on + strand, within GFF3249 at 66.375 kb on + strand, within GFF3249 at 66.376 kb on - strand, within GFF3249 at 66.376 kb on - strand, within GFF3249 at 66.376 kb on - strand, within GFF3249 at 66.376 kb on - strand, within GFF3249 at 66.376 kb on - strand, within GFF3249 at 66.376 kb on - strand, within GFF3249 at 66.376 kb on - strand, within GFF3249 at 66.376 kb on - strand, within GFF3249 at 66.376 kb on - strand, within GFF3249 at 66.376 kb on - strand, within GFF3249 at 66.376 kb on - strand, within GFF3249 at 66.376 kb on - strand, within GFF3249 at 66.376 kb on - strand, within GFF3249 at 66.376 kb on - strand, within GFF3249 at 66.422 kb on + strand, within GFF3249 at 66.422 kb on + strand, within GFF3249 at 66.431 kb on + strand, within GFF3249 at 66.431 kb on + strand, within GFF3249 at 66.431 kb on + strand, within GFF3249 at 66.431 kb on + strand, within GFF3249 at 66.432 kb on - strand, within GFF3249 at 66.432 kb on - strand, within GFF3249 at 66.521 kb on + strand, within GFF3249 at 66.522 kb on - strand, within GFF3249 at 66.522 kb on - strand, within GFF3249 at 66.522 kb on - strand, within GFF3249 at 66.536 kb on + strand at 66.536 kb on + strand at 66.536 kb on + strand at 66.536 kb on + strand at 66.536 kb on + strand at 66.536 kb on + strand at 66.536 kb on + strand at 66.536 kb on + strand at 66.537 kb on - strand at 66.537 kb on - strand at 66.537 kb on - strand at 66.537 kb on - strand at 66.537 kb on - strand at 66.537 kb on - strand at 66.537 kb on - strand at 66.621 kb on + strand, within GFF3250 at 66.648 kb on - strand, within GFF3250 at 66.648 kb on - strand, within GFF3250 at 67.039 kb on + strand at 67.055 kb on + strand at 67.055 kb on + strand at 67.055 kb on + strand at 67.055 kb on + strand at 67.055 kb on + strand at 67.055 kb on + strand at 67.055 kb on + strand at 67.056 kb on - strand at 67.056 kb on - strand at 67.056 kb on - strand at 67.056 kb on - strand at 67.056 kb on - strand at 67.056 kb on - strand at 67.056 kb on - strand at 67.056 kb on - strand at 67.056 kb on - strand at 67.056 kb on - strand at 67.056 kb on - strand at 67.056 kb on - strand at 67.056 kb on - strand at 67.248 kb on + strand at 67.266 kb on + strand at 67.295 kb on + strand at 67.295 kb on + strand at 67.295 kb on + strand at 67.296 kb on - strand at 67.296 kb on - strand at 67.372 kb on + strand at 67.372 kb on + strand at 67.372 kb on + strand at 67.372 kb on + strand at 67.372 kb on + strand at 67.372 kb on + strand at 67.373 kb on - strand at 67.373 kb on - strand at 67.373 kb on - strand at 67.373 kb on - strand at 67.373 kb on - strand at 67.373 kb on - strand at 67.373 kb on - strand at 67.373 kb on - strand at 67.373 kb on - strand at 67.373 kb on - strand at 67.440 kb on + strand, within GFF3251 at 67.441 kb on - strand, within GFF3251 at 67.441 kb on - strand, within GFF3251 at 67.441 kb on - strand, within GFF3251 at 67.621 kb on + strand, within GFF3251 at 67.631 kb on - strand, within GFF3251 at 67.631 kb on - strand, within GFF3251 at 67.631 kb on - strand, within GFF3251 at 67.663 kb on + strand, within GFF3251 at 67.663 kb on + strand, within GFF3251 at 67.663 kb on + strand, within GFF3251 at 67.663 kb on + strand, within GFF3251 at 67.663 kb on + strand, within GFF3251 at 67.664 kb on - strand, within GFF3251 at 67.664 kb on - strand, within GFF3251 at 67.664 kb on - strand, within GFF3251 at 67.664 kb on - strand, within GFF3251 at 67.664 kb on - strand, within GFF3251 at 67.664 kb on - strand, within GFF3251 at 67.664 kb on - strand, within GFF3251 at 67.664 kb on - strand, within GFF3251 at 67.674 kb on - strand, within GFF3251 at 67.747 kb on + strand, within GFF3251 at 67.747 kb on + strand, within GFF3251 at 67.747 kb on + strand, within GFF3251 at 67.747 kb on + strand, within GFF3251 at 67.747 kb on + strand, within GFF3251 at 67.747 kb on + strand, within GFF3251 at 67.747 kb on + strand, within GFF3251 at 67.747 kb on + strand, within GFF3251 at 67.748 kb on - strand, within GFF3251 at 67.748 kb on - strand, within GFF3251 at 67.748 kb on - strand, within GFF3251 at 67.748 kb on - strand, within GFF3251 at 67.748 kb on - strand, within GFF3251 at 67.748 kb on - strand, within GFF3251 at 67.786 kb on + strand, within GFF3251 at 67.786 kb on + strand, within GFF3251 at 67.786 kb on + strand, within GFF3251 at 67.786 kb on + strand, within GFF3251 at 67.786 kb on + strand, within GFF3251 at 67.786 kb on + strand, within GFF3251 at 67.786 kb on + strand, within GFF3251 at 67.786 kb on + strand, within GFF3251 at 67.787 kb on - strand, within GFF3251 at 67.787 kb on - strand, within GFF3251 at 67.787 kb on - strand, within GFF3251 at 67.787 kb on - strand, within GFF3251 at 67.787 kb on - strand, within GFF3251 at 67.787 kb on - strand, within GFF3251
Per-strain Table
Position Strand Gene LocusTag Fraction no phage control remove 65,805 + +0.2 65,805 + -1.0 65,805 + +0.4 65,805 + +0.4 65,806 - -0.4 65,806 - -0.1 65,812 + +0.7 65,813 - -0.3 65,968 + -0.7 65,968 + -0.4 65,968 + +0.5 65,968 + -0.8 65,969 - +0.5 65,969 - -0.1 65,969 - -1.7 65,969 - +1.1 65,973 + +0.3 65,973 + +0.5 65,973 + -0.3 65,973 + -0.3 65,973 + +0.2 65,974 - -0.1 65,974 - -0.1 65,974 - -0.4 65,998 + -0.4 65,998 + -0.6 65,999 - +1.1 65,999 - +0.1 66,051 + -0.1 66,051 + -0.8 66,161 + -1.4 66,161 + +1.3 66,161 + -0.4 66,161 + -0.7 66,162 - +0.3 66,162 - -0.1 66,323 + GFF3249 0.41 -1.3 66,323 + GFF3249 0.41 -0.7 66,323 + GFF3249 0.41 -0.7 66,323 + GFF3249 0.41 -1.0 66,323 + GFF3249 0.41 -0.3 66,323 + GFF3249 0.41 -0.4 66,323 + GFF3249 0.41 -1.0 66,323 + GFF3249 0.41 +0.3 66,323 + GFF3249 0.41 +0.6 66,323 + GFF3249 0.41 -0.4 66,323 + GFF3249 0.41 -1.3 66,323 + GFF3249 0.41 +0.2 66,323 + GFF3249 0.41 -0.4 66,323 + GFF3249 0.41 +0.9 66,323 + GFF3249 0.41 -0.5 66,323 + GFF3249 0.41 -0.0 66,323 + GFF3249 0.41 -0.7 66,323 + GFF3249 0.41 -0.7 66,323 + GFF3249 0.41 -0.9 66,323 + GFF3249 0.41 -1.6 66,323 + GFF3249 0.41 -0.3 66,324 - GFF3249 0.42 -0.4 66,324 - GFF3249 0.42 +0.3 66,324 - GFF3249 0.42 -1.1 66,324 - GFF3249 0.42 -0.6 66,324 - GFF3249 0.42 +0.3 66,324 - GFF3249 0.42 -0.7 66,324 - GFF3249 0.42 -0.4 66,356 + GFF3249 0.49 +0.7 66,356 + GFF3249 0.49 +0.1 66,356 + GFF3249 0.49 -0.3 66,357 - GFF3249 0.50 -1.4 66,375 + GFF3249 0.54 +2.1 66,375 + GFF3249 0.54 -0.6 66,375 + GFF3249 0.54 -0.4 66,375 + GFF3249 0.54 +0.2 66,375 + GFF3249 0.54 +1.4 66,375 + GFF3249 0.54 -0.3 66,375 + GFF3249 0.54 -0.1 66,375 + GFF3249 0.54 -1.4 66,375 + GFF3249 0.54 +0.3 66,375 + GFF3249 0.54 +0.9 66,375 + GFF3249 0.54 +0.3 66,375 + GFF3249 0.54 -0.5 66,376 - GFF3249 0.54 +0.3 66,376 - GFF3249 0.54 -0.9 66,376 - GFF3249 0.54 -0.2 66,376 - GFF3249 0.54 +0.9 66,376 - GFF3249 0.54 -0.9 66,376 - GFF3249 0.54 -0.0 66,376 - GFF3249 0.54 -1.7 66,376 - GFF3249 0.54 -0.8 66,376 - GFF3249 0.54 +0.3 66,376 - GFF3249 0.54 -1.7 66,376 - GFF3249 0.54 +0.1 66,376 - GFF3249 0.54 +0.6 66,376 - GFF3249 0.54 -1.7 66,376 - GFF3249 0.54 -1.0 66,422 + GFF3249 0.65 -0.3 66,422 + GFF3249 0.65 -0.1 66,431 + GFF3249 0.67 -0.5 66,431 + GFF3249 0.67 +0.1 66,431 + GFF3249 0.67 -1.0 66,431 + GFF3249 0.67 +0.9 66,432 - GFF3249 0.68 +0.6 66,432 - GFF3249 0.68 -1.5 66,521 + GFF3249 0.89 -0.6 66,522 - GFF3249 0.89 -0.0 66,522 - GFF3249 0.89 +0.3 66,522 - GFF3249 0.89 -1.3 66,536 + -0.6 66,536 + +0.2 66,536 + -0.1 66,536 + -0.7 66,536 + +1.0 66,536 + -1.3 66,536 + +0.2 66,536 + -0.4 66,537 - +2.9 66,537 - +1.1 66,537 - -0.9 66,537 - -1.3 66,537 - +0.4 66,537 - -2.5 66,537 - -1.8 66,621 + GFF3250 0.12 -0.5 66,648 - GFF3250 0.18 -1.6 66,648 - GFF3250 0.18 -0.3 67,039 + -1.5 67,055 + -0.2 67,055 + -0.8 67,055 + +0.4 67,055 + -0.1 67,055 + -0.5 67,055 + -2.0 67,055 + -0.5 67,056 - -2.1 67,056 - -0.4 67,056 - -1.4 67,056 - +1.0 67,056 - -0.9 67,056 - -2.3 67,056 - +0.5 67,056 - +0.2 67,056 - -1.4 67,056 - +1.5 67,056 - -0.8 67,056 - -1.0 67,056 - -0.6 67,248 + -0.2 67,266 + -1.3 67,295 + -0.3 67,295 + -0.6 67,295 + -0.2 67,296 - -0.8 67,296 - -0.2 67,372 + -0.1 67,372 + -0.6 67,372 + +0.0 67,372 + +1.1 67,372 + +0.9 67,372 + +0.0 67,373 - -0.9 67,373 - -0.7 67,373 - -0.7 67,373 - +0.7 67,373 - +0.8 67,373 - +1.5 67,373 - -1.4 67,373 - -0.4 67,373 - -1.6 67,373 - -0.5 67,440 + GFF3251 0.13 +1.6 67,441 - GFF3251 0.13 -0.4 67,441 - GFF3251 0.13 +0.5 67,441 - GFF3251 0.13 +0.7 67,621 + GFF3251 0.37 +0.9 67,631 - GFF3251 0.38 +0.1 67,631 - GFF3251 0.38 -0.4 67,631 - GFF3251 0.38 -0.3 67,663 + GFF3251 0.42 -2.1 67,663 + GFF3251 0.42 +0.6 67,663 + GFF3251 0.42 -0.0 67,663 + GFF3251 0.42 -0.6 67,663 + GFF3251 0.42 -1.6 67,664 - GFF3251 0.42 -0.7 67,664 - GFF3251 0.42 -1.3 67,664 - GFF3251 0.42 +0.3 67,664 - GFF3251 0.42 +0.2 67,664 - GFF3251 0.42 -0.6 67,664 - GFF3251 0.42 -0.7 67,664 - GFF3251 0.42 -0.6 67,664 - GFF3251 0.42 -0.7 67,674 - GFF3251 0.44 -0.7 67,747 + GFF3251 0.53 -0.1 67,747 + GFF3251 0.53 -0.3 67,747 + GFF3251 0.53 -0.7 67,747 + GFF3251 0.53 -1.0 67,747 + GFF3251 0.53 +1.1 67,747 + GFF3251 0.53 -0.6 67,747 + GFF3251 0.53 +1.4 67,747 + GFF3251 0.53 -0.4 67,748 - GFF3251 0.53 +0.3 67,748 - GFF3251 0.53 -0.3 67,748 - GFF3251 0.53 -0.2 67,748 - GFF3251 0.53 -0.2 67,748 - GFF3251 0.53 -0.5 67,748 - GFF3251 0.53 +0.2 67,786 + GFF3251 0.58 -0.1 67,786 + GFF3251 0.58 -1.6 67,786 + GFF3251 0.58 +0.5 67,786 + GFF3251 0.58 +1.3 67,786 + GFF3251 0.58 +0.1 67,786 + GFF3251 0.58 -0.2 67,786 + GFF3251 0.58 -0.8 67,786 + GFF3251 0.58 -0.7 67,787 - GFF3251 0.58 +0.4 67,787 - GFF3251 0.58 +0.5 67,787 - GFF3251 0.58 -0.8 67,787 - GFF3251 0.58 -0.9 67,787 - GFF3251 0.58 -0.3 67,787 - GFF3251 0.58 +0.2
Or see this region's nucleotide sequence