Experiment: no phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF298 and GFF299 overlap by 4 nucleotides GFF299 and GFF300 overlap by 1 nucleotides GFF300 and GFF301 overlap by 4 nucleotides GFF301 and GFF302 overlap by 1 nucleotides
GFF298 - 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase (EC 2.1.1.177), at 332,497 to 332,964
GFF298
GFF299 - Ribosomal silencing factor RsfA, at 332,961 to 333,647
GFF299
GFF300 - Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18), at 333,647 to 334,279
GFF300
GFF301 - Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3), at 334,276 to 335,193
GFF301
GFF302 - Phosphoribosylamine--glycine ligase (EC 6.3.4.13), at 335,193 to 336,494
GFF302
Position (kb) 333
334
335 Strain fitness (log2 ratio) -2
-1
0
1 at 332.810 kb on + strand, within GFF298 at 332.810 kb on + strand, within GFF298 at 332.810 kb on + strand, within GFF298 at 332.810 kb on + strand, within GFF298 at 332.810 kb on + strand, within GFF298 at 332.810 kb on + strand, within GFF298 at 332.810 kb on + strand, within GFF298 at 332.811 kb on - strand, within GFF298 at 332.811 kb on - strand, within GFF298 at 332.811 kb on - strand, within GFF298 at 332.811 kb on - strand, within GFF298 at 332.897 kb on + strand, within GFF298 at 332.897 kb on + strand, within GFF298 at 332.898 kb on - strand, within GFF298 at 333.331 kb on + strand, within GFF299 at 333.331 kb on + strand, within GFF299 at 333.331 kb on + strand, within GFF299 at 333.331 kb on + strand, within GFF299 at 333.331 kb on + strand, within GFF299 at 333.331 kb on + strand, within GFF299 at 333.331 kb on + strand, within GFF299 at 333.331 kb on + strand, within GFF299 at 333.331 kb on + strand, within GFF299 at 333.331 kb on + strand, within GFF299 at 333.331 kb on + strand, within GFF299 at 333.331 kb on + strand, within GFF299 at 333.331 kb on + strand, within GFF299 at 333.331 kb on + strand, within GFF299 at 333.332 kb on - strand, within GFF299 at 333.332 kb on - strand, within GFF299 at 333.332 kb on - strand, within GFF299 at 333.332 kb on - strand, within GFF299 at 333.332 kb on - strand, within GFF299 at 333.332 kb on - strand, within GFF299 at 333.332 kb on - strand, within GFF299 at 333.332 kb on - strand, within GFF299 at 333.332 kb on - strand, within GFF299 at 333.332 kb on - strand, within GFF299 at 333.332 kb on - strand, within GFF299 at 333.332 kb on - strand, within GFF299 at 333.334 kb on + strand, within GFF299 at 333.334 kb on + strand, within GFF299 at 333.334 kb on + strand, within GFF299 at 333.334 kb on + strand, within GFF299 at 333.334 kb on + strand, within GFF299 at 333.334 kb on + strand, within GFF299 at 333.334 kb on + strand, within GFF299 at 333.334 kb on + strand, within GFF299 at 333.335 kb on - strand, within GFF299 at 333.335 kb on - strand, within GFF299 at 333.335 kb on - strand, within GFF299 at 333.335 kb on - strand, within GFF299 at 333.335 kb on - strand, within GFF299 at 333.552 kb on + strand, within GFF299 at 333.553 kb on - strand, within GFF299 at 333.553 kb on - strand, within GFF299 at 333.661 kb on - strand at 333.678 kb on + strand at 333.679 kb on + strand at 333.679 kb on + strand at 333.680 kb on - strand at 333.680 kb on - strand at 333.680 kb on - strand at 333.680 kb on - strand at 333.680 kb on - strand at 333.680 kb on - strand at 333.681 kb on + strand at 333.766 kb on + strand, within GFF300 at 333.766 kb on + strand, within GFF300 at 333.766 kb on + strand, within GFF300 at 333.767 kb on - strand, within GFF300
Per-strain Table
Position Strand Gene LocusTag Fraction no phage control remove 332,810 + GFF298 0.67 -0.3 332,810 + GFF298 0.67 -0.4 332,810 + GFF298 0.67 -1.0 332,810 + GFF298 0.67 +0.2 332,810 + GFF298 0.67 -0.6 332,810 + GFF298 0.67 +0.4 332,810 + GFF298 0.67 +0.0 332,811 - GFF298 0.67 -0.2 332,811 - GFF298 0.67 +0.1 332,811 - GFF298 0.67 +0.9 332,811 - GFF298 0.67 +0.1 332,897 + GFF298 0.85 -0.3 332,897 + GFF298 0.85 +0.1 332,898 - GFF298 0.86 -0.2 333,331 + GFF299 0.54 -1.1 333,331 + GFF299 0.54 -0.0 333,331 + GFF299 0.54 -0.3 333,331 + GFF299 0.54 +0.4 333,331 + GFF299 0.54 -0.0 333,331 + GFF299 0.54 -0.5 333,331 + GFF299 0.54 +0.0 333,331 + GFF299 0.54 +0.8 333,331 + GFF299 0.54 +1.1 333,331 + GFF299 0.54 +0.1 333,331 + GFF299 0.54 +1.0 333,331 + GFF299 0.54 -1.4 333,331 + GFF299 0.54 -0.5 333,331 + GFF299 0.54 -0.2 333,332 - GFF299 0.54 -0.5 333,332 - GFF299 0.54 -0.1 333,332 - GFF299 0.54 +0.4 333,332 - GFF299 0.54 -0.6 333,332 - GFF299 0.54 +0.1 333,332 - GFF299 0.54 -0.8 333,332 - GFF299 0.54 -0.9 333,332 - GFF299 0.54 -0.9 333,332 - GFF299 0.54 -0.8 333,332 - GFF299 0.54 -0.9 333,332 - GFF299 0.54 +0.0 333,332 - GFF299 0.54 -1.9 333,334 + GFF299 0.54 -0.2 333,334 + GFF299 0.54 -0.1 333,334 + GFF299 0.54 -1.3 333,334 + GFF299 0.54 -1.6 333,334 + GFF299 0.54 -0.2 333,334 + GFF299 0.54 -0.3 333,334 + GFF299 0.54 -0.5 333,334 + GFF299 0.54 -1.2 333,335 - GFF299 0.54 -0.8 333,335 - GFF299 0.54 +0.1 333,335 - GFF299 0.54 -1.1 333,335 - GFF299 0.54 +0.0 333,335 - GFF299 0.54 +0.1 333,552 + GFF299 0.86 -1.4 333,553 - GFF299 0.86 -2.4 333,553 - GFF299 0.86 -0.8 333,661 - +0.1 333,678 + -0.5 333,679 + -1.3 333,679 + -1.9 333,680 - -1.1 333,680 - -1.6 333,680 - -0.8 333,680 - -1.9 333,680 - -1.0 333,680 - -1.5 333,681 + -1.6 333,766 + GFF300 0.19 -2.3 333,766 + GFF300 0.19 -0.6 333,766 + GFF300 0.19 -1.4 333,767 - GFF300 0.19 -2.1
Or see this region's nucleotide sequence