Experiment: no phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2834 and GFF2835 are separated by 77 nucleotides GFF2835 and GFF2836 are separated by 22 nucleotides GFF2836 and GFF2837 are separated by 5 nucleotides GFF2837 and GFF2838 are separated by 94 nucleotides GFF2838 and GFF2839 are separated by 183 nucleotides
GFF2834 - Bacterioferritin-associated ferredoxin, at 261,545 to 261,817
GFF2834
GFF2835 - putative TonB-dependent receptor, at 261,895 to 262,620
GFF2835
GFF2836 - MotA/TolQ/ExbB proton channel family protein, at 262,643 to 263,356
GFF2836
GFF2837 - Biopolymer transport protein ExbD/TolR, at 263,362 to 263,775
GFF2837
GFF2838 - hypothetical protein, at 263,870 to 264,082
GFF2838
GFF2839 - Protein GlcG, at 264,266 to 264,673
GFF2839
Position (kb) 262
263
264 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 261.856 kb on + strand at 261.856 kb on + strand at 261.856 kb on + strand at 261.856 kb on + strand at 261.856 kb on + strand at 261.857 kb on - strand at 261.857 kb on - strand at 261.857 kb on - strand at 261.877 kb on - strand at 261.917 kb on + strand at 261.918 kb on - strand at 261.918 kb on - strand at 262.161 kb on + strand, within GFF2835 at 262.161 kb on + strand, within GFF2835 at 262.161 kb on + strand, within GFF2835 at 262.162 kb on - strand, within GFF2835 at 262.367 kb on - strand, within GFF2835 at 262.390 kb on + strand, within GFF2835 at 262.528 kb on + strand, within GFF2835 at 262.528 kb on + strand, within GFF2835 at 262.528 kb on + strand, within GFF2835 at 262.528 kb on + strand, within GFF2835 at 262.529 kb on - strand, within GFF2835 at 262.529 kb on - strand, within GFF2835 at 262.529 kb on - strand, within GFF2835 at 262.529 kb on - strand, within GFF2835 at 262.529 kb on - strand, within GFF2835 at 262.529 kb on - strand, within GFF2835 at 262.529 kb on - strand, within GFF2835 at 262.588 kb on + strand at 262.588 kb on + strand at 262.588 kb on + strand at 262.588 kb on + strand at 262.588 kb on + strand at 262.588 kb on + strand at 262.588 kb on + strand at 262.588 kb on + strand at 262.589 kb on - strand at 262.606 kb on + strand at 262.606 kb on + strand at 262.607 kb on - strand at 262.607 kb on - strand at 262.618 kb on + strand at 262.618 kb on + strand at 262.619 kb on - strand at 262.642 kb on + strand at 262.642 kb on + strand at 262.642 kb on + strand at 262.643 kb on - strand at 262.643 kb on - strand at 262.643 kb on - strand at 262.643 kb on - strand at 262.778 kb on + strand, within GFF2836 at 262.778 kb on + strand, within GFF2836 at 262.779 kb on - strand, within GFF2836 at 262.779 kb on - strand, within GFF2836 at 263.090 kb on + strand, within GFF2836 at 263.090 kb on + strand, within GFF2836 at 263.090 kb on + strand, within GFF2836 at 263.090 kb on + strand, within GFF2836 at 263.090 kb on + strand, within GFF2836 at 263.090 kb on + strand, within GFF2836 at 263.090 kb on + strand, within GFF2836 at 263.090 kb on + strand, within GFF2836 at 263.090 kb on + strand, within GFF2836 at 263.090 kb on + strand, within GFF2836 at 263.091 kb on - strand, within GFF2836 at 263.091 kb on - strand, within GFF2836 at 263.091 kb on - strand, within GFF2836 at 263.091 kb on - strand, within GFF2836 at 263.091 kb on - strand, within GFF2836 at 263.091 kb on - strand, within GFF2836 at 263.091 kb on - strand, within GFF2836 at 263.091 kb on - strand, within GFF2836 at 263.091 kb on - strand, within GFF2836 at 263.091 kb on - strand, within GFF2836 at 263.091 kb on - strand, within GFF2836 at 263.091 kb on - strand, within GFF2836 at 263.091 kb on - strand, within GFF2836 at 263.091 kb on - strand, within GFF2836 at 263.091 kb on - strand, within GFF2836 at 263.091 kb on - strand, within GFF2836 at 263.216 kb on + strand, within GFF2836 at 263.216 kb on + strand, within GFF2836 at 263.216 kb on + strand, within GFF2836 at 263.288 kb on + strand at 263.288 kb on + strand at 263.288 kb on + strand at 263.289 kb on - strand at 263.289 kb on - strand at 263.575 kb on + strand, within GFF2837 at 263.576 kb on - strand, within GFF2837 at 263.578 kb on + strand, within GFF2837 at 263.578 kb on + strand, within GFF2837 at 263.767 kb on - strand at 263.856 kb on + strand at 264.036 kb on - strand, within GFF2838 at 264.036 kb on - strand, within GFF2838 at 264.080 kb on + strand at 264.080 kb on + strand at 264.080 kb on + strand at 264.080 kb on + strand at 264.080 kb on + strand at 264.080 kb on + strand at 264.080 kb on + strand at 264.080 kb on + strand at 264.080 kb on + strand at 264.080 kb on + strand at 264.080 kb on + strand at 264.080 kb on + strand at 264.081 kb on - strand at 264.081 kb on - strand at 264.081 kb on - strand at 264.081 kb on - strand at 264.081 kb on - strand at 264.081 kb on - strand at 264.081 kb on - strand at 264.081 kb on - strand at 264.081 kb on - strand at 264.081 kb on - strand at 264.081 kb on - strand at 264.081 kb on - strand at 264.179 kb on + strand at 264.180 kb on - strand at 264.180 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction no phage control remove 261,856 + -0.6 261,856 + +0.2 261,856 + -0.0 261,856 + -0.4 261,856 + -0.4 261,857 - +0.3 261,857 - -2.0 261,857 - +0.3 261,877 - +0.7 261,917 + +0.0 261,918 - -0.9 261,918 - -1.3 262,161 + GFF2835 0.37 -1.8 262,161 + GFF2835 0.37 -1.1 262,161 + GFF2835 0.37 -1.1 262,162 - GFF2835 0.37 -0.6 262,367 - GFF2835 0.65 -1.1 262,390 + GFF2835 0.68 -2.2 262,528 + GFF2835 0.87 -2.8 262,528 + GFF2835 0.87 -0.6 262,528 + GFF2835 0.87 -1.6 262,528 + GFF2835 0.87 -1.5 262,529 - GFF2835 0.87 +0.1 262,529 - GFF2835 0.87 -2.5 262,529 - GFF2835 0.87 -1.7 262,529 - GFF2835 0.87 +0.7 262,529 - GFF2835 0.87 -0.3 262,529 - GFF2835 0.87 -0.6 262,529 - GFF2835 0.87 -1.6 262,588 + -0.9 262,588 + -0.6 262,588 + +0.7 262,588 + -0.9 262,588 + +0.1 262,588 + -0.9 262,588 + -2.1 262,588 + +0.7 262,589 - -0.9 262,606 + -0.5 262,606 + -0.9 262,607 - +0.7 262,607 - -1.6 262,618 + -0.3 262,618 + +0.1 262,619 - -2.3 262,642 + +1.0 262,642 + -0.5 262,642 + -1.8 262,643 - +0.1 262,643 - -1.3 262,643 - -3.0 262,643 - -1.1 262,778 + GFF2836 0.19 -0.3 262,778 + GFF2836 0.19 -0.3 262,779 - GFF2836 0.19 -1.1 262,779 - GFF2836 0.19 -0.3 263,090 + GFF2836 0.63 -1.8 263,090 + GFF2836 0.63 -0.3 263,090 + GFF2836 0.63 -2.3 263,090 + GFF2836 0.63 -0.6 263,090 + GFF2836 0.63 -0.6 263,090 + GFF2836 0.63 -1.6 263,090 + GFF2836 0.63 -0.9 263,090 + GFF2836 0.63 -1.8 263,090 + GFF2836 0.63 -1.6 263,090 + GFF2836 0.63 -0.6 263,091 - GFF2836 0.63 -1.8 263,091 - GFF2836 0.63 +0.7 263,091 - GFF2836 0.63 -1.5 263,091 - GFF2836 0.63 -1.3 263,091 - GFF2836 0.63 -2.4 263,091 - GFF2836 0.63 -3.2 263,091 - GFF2836 0.63 -1.3 263,091 - GFF2836 0.63 -1.5 263,091 - GFF2836 0.63 -0.9 263,091 - GFF2836 0.63 -2.3 263,091 - GFF2836 0.63 -0.9 263,091 - GFF2836 0.63 -1.1 263,091 - GFF2836 0.63 -0.3 263,091 - GFF2836 0.63 -1.6 263,091 - GFF2836 0.63 -1.9 263,091 - GFF2836 0.63 -0.3 263,216 + GFF2836 0.80 -1.3 263,216 + GFF2836 0.80 -1.1 263,216 + GFF2836 0.80 -1.6 263,288 + -1.3 263,288 + -0.3 263,288 + -0.3 263,289 - -1.3 263,289 - -0.9 263,575 + GFF2837 0.51 -1.5 263,576 - GFF2837 0.52 -1.6 263,578 + GFF2837 0.52 -1.6 263,578 + GFF2837 0.52 -1.5 263,767 - -0.2 263,856 + -0.5 264,036 - GFF2838 0.78 -1.4 264,036 - GFF2838 0.78 -2.8 264,080 + +2.7 264,080 + -0.6 264,080 + +0.1 264,080 + -0.7 264,080 + -0.6 264,080 + -0.9 264,080 + -0.7 264,080 + +0.1 264,080 + -0.9 264,080 + +0.5 264,080 + -0.5 264,080 + -0.1 264,081 - -0.8 264,081 - +0.1 264,081 - -0.2 264,081 - -0.8 264,081 - -1.5 264,081 - +1.5 264,081 - +0.7 264,081 - +0.1 264,081 - -2.3 264,081 - -1.9 264,081 - -0.1 264,081 - +0.7 264,179 + -0.9 264,180 - -1.3 264,180 - -1.2
Or see this region's nucleotide sequence