Experiment: no phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2435 and GFF2436 overlap by 4 nucleotides GFF2436 and GFF2437 are separated by 48 nucleotides GFF2437 and GFF2438 are separated by 16 nucleotides
GFF2435 - FIG138928: iron-regulated membrane protein, at 485,585 to 487,261
GFF2435
GFF2436 - no description, at 487,258 to 487,620
GFF2436
GFF2437 - hypothetical protein, at 487,669 to 488,322
GFF2437
GFF2438 - Ferrichrome-iron receptor, at 488,339 to 490,795
GFF2438
Position (kb) 487
488 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 486.269 kb on + strand, within GFF2435 at 486.521 kb on + strand, within GFF2435 at 486.521 kb on + strand, within GFF2435 at 486.522 kb on - strand, within GFF2435 at 486.719 kb on + strand, within GFF2435 at 486.719 kb on + strand, within GFF2435 at 486.720 kb on - strand, within GFF2435 at 486.720 kb on - strand, within GFF2435 at 487.270 kb on + strand at 487.271 kb on - strand at 487.271 kb on - strand at 487.271 kb on - strand at 487.271 kb on - strand at 487.271 kb on - strand at 487.271 kb on - strand at 487.300 kb on + strand, within GFF2436 at 487.300 kb on + strand, within GFF2436 at 487.459 kb on - strand, within GFF2436 at 487.459 kb on - strand, within GFF2436 at 487.529 kb on - strand, within GFF2436 at 487.753 kb on + strand, within GFF2437 at 487.753 kb on + strand, within GFF2437 at 487.754 kb on - strand, within GFF2437 at 487.987 kb on + strand, within GFF2437 at 487.988 kb on - strand, within GFF2437 at 488.200 kb on + strand, within GFF2437 at 488.200 kb on + strand, within GFF2437 at 488.200 kb on + strand, within GFF2437 at 488.201 kb on - strand, within GFF2437 at 488.257 kb on + strand at 488.341 kb on - strand at 488.349 kb on + strand at 488.349 kb on + strand at 488.349 kb on + strand at 488.350 kb on - strand at 488.385 kb on + strand at 488.385 kb on + strand at 488.388 kb on + strand at 488.389 kb on - strand at 488.418 kb on + strand at 488.418 kb on + strand at 488.418 kb on + strand at 488.418 kb on + strand at 488.418 kb on + strand at 488.418 kb on + strand at 488.418 kb on + strand at 488.418 kb on + strand at 488.418 kb on + strand at 488.418 kb on + strand at 488.418 kb on + strand at 488.418 kb on + strand at 488.418 kb on + strand at 488.418 kb on + strand at 488.418 kb on + strand at 488.418 kb on + strand at 488.419 kb on - strand at 488.419 kb on - strand at 488.419 kb on - strand at 488.419 kb on - strand at 488.419 kb on - strand at 488.419 kb on - strand at 488.419 kb on - strand at 488.502 kb on + strand at 488.502 kb on + strand at 488.503 kb on - strand at 488.535 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction no phage control remove 486,269 + GFF2435 0.41 -0.3 486,521 + GFF2435 0.56 -1.0 486,521 + GFF2435 0.56 -0.0 486,522 - GFF2435 0.56 -0.4 486,719 + GFF2435 0.68 +0.1 486,719 + GFF2435 0.68 -0.3 486,720 - GFF2435 0.68 +0.4 486,720 - GFF2435 0.68 -0.2 487,270 + -0.5 487,271 - -0.8 487,271 - +0.1 487,271 - -0.1 487,271 - -0.2 487,271 - +0.3 487,271 - -0.6 487,300 + GFF2436 0.12 -0.2 487,300 + GFF2436 0.12 -1.2 487,459 - GFF2436 0.55 -0.8 487,459 - GFF2436 0.55 -1.1 487,529 - GFF2436 0.75 -0.8 487,753 + GFF2437 0.13 -0.4 487,753 + GFF2437 0.13 -1.1 487,754 - GFF2437 0.13 -0.5 487,987 + GFF2437 0.49 +0.5 487,988 - GFF2437 0.49 -0.5 488,200 + GFF2437 0.81 -0.4 488,200 + GFF2437 0.81 -1.0 488,200 + GFF2437 0.81 -0.1 488,201 - GFF2437 0.81 +0.8 488,257 + -0.2 488,341 - -0.6 488,349 + +1.8 488,349 + +0.5 488,349 + -0.5 488,350 - -0.0 488,385 + +0.2 488,385 + -0.2 488,388 + +0.3 488,389 - +0.6 488,418 + +0.5 488,418 + -0.1 488,418 + -0.7 488,418 + -0.7 488,418 + +0.8 488,418 + -0.3 488,418 + -0.2 488,418 + -2.1 488,418 + -0.2 488,418 + -0.1 488,418 + +0.0 488,418 + +0.6 488,418 + +2.8 488,418 + -0.2 488,418 + -0.9 488,418 + -0.8 488,419 - +0.6 488,419 - -0.4 488,419 - +0.7 488,419 - -0.7 488,419 - +1.2 488,419 - -0.4 488,419 - +0.0 488,502 + -0.1 488,502 + +0.3 488,503 - +0.1 488,535 + +0.4
Or see this region's nucleotide sequence