Experiment: no phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1323 and GFF1324 are separated by 155 nucleotides GFF1324 and GFF1325 are separated by 5 nucleotides GFF1325 and GFF1326 are separated by 63 nucleotides
GFF1323 - Methionine aminopeptidase (EC 3.4.11.18), at 661,241 to 662,065
GFF1323
GFF1324 - Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3), at 662,221 to 666,189
GFF1324
GFF1325 - no description, at 666,195 to 666,506
GFF1325
GFF1326 - Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8), at 666,570 to 667,355
GFF1326
Position (kb) 662
663
664
665
666
667 Strain fitness (log2 ratio) -2
-1
0
1
2 at 661.389 kb on + strand, within GFF1323 at 661.389 kb on + strand, within GFF1323 at 661.389 kb on + strand, within GFF1323 at 661.389 kb on + strand, within GFF1323 at 661.390 kb on - strand, within GFF1323 at 661.390 kb on - strand, within GFF1323 at 661.390 kb on - strand, within GFF1323 at 661.500 kb on + strand, within GFF1323 at 661.501 kb on - strand, within GFF1323 at 661.501 kb on - strand, within GFF1323 at 661.501 kb on - strand, within GFF1323 at 661.719 kb on + strand, within GFF1323 at 661.719 kb on + strand, within GFF1323 at 661.719 kb on + strand, within GFF1323 at 661.719 kb on + strand, within GFF1323 at 661.719 kb on + strand, within GFF1323 at 661.719 kb on + strand, within GFF1323 at 661.719 kb on + strand, within GFF1323 at 661.719 kb on + strand, within GFF1323 at 661.719 kb on + strand, within GFF1323 at 661.719 kb on + strand, within GFF1323 at 661.719 kb on + strand, within GFF1323 at 661.719 kb on + strand, within GFF1323 at 661.719 kb on + strand, within GFF1323 at 661.719 kb on + strand, within GFF1323 at 661.719 kb on + strand, within GFF1323 at 661.720 kb on - strand, within GFF1323 at 661.720 kb on - strand, within GFF1323 at 661.720 kb on - strand, within GFF1323 at 661.720 kb on - strand, within GFF1323 at 661.720 kb on - strand, within GFF1323 at 661.720 kb on - strand, within GFF1323 at 661.720 kb on - strand, within GFF1323 at 661.720 kb on - strand, within GFF1323 at 661.720 kb on - strand, within GFF1323 at 661.720 kb on - strand, within GFF1323 at 661.720 kb on - strand, within GFF1323 at 661.720 kb on - strand, within GFF1323 at 661.720 kb on - strand, within GFF1323 at 661.720 kb on - strand, within GFF1323 at 661.884 kb on + strand, within GFF1323 at 661.884 kb on + strand, within GFF1323 at 661.884 kb on + strand, within GFF1323 at 661.884 kb on + strand, within GFF1323 at 661.884 kb on + strand, within GFF1323 at 661.885 kb on - strand, within GFF1323 at 661.885 kb on - strand, within GFF1323 at 661.885 kb on - strand, within GFF1323 at 661.885 kb on - strand, within GFF1323 at 661.885 kb on - strand, within GFF1323 at 661.885 kb on - strand, within GFF1323 at 661.885 kb on - strand, within GFF1323 at 661.885 kb on - strand, within GFF1323 at 661.923 kb on + strand, within GFF1323 at 661.923 kb on + strand, within GFF1323 at 661.923 kb on + strand, within GFF1323 at 661.923 kb on + strand, within GFF1323 at 661.923 kb on + strand, within GFF1323 at 661.923 kb on + strand, within GFF1323 at 661.923 kb on + strand, within GFF1323 at 661.923 kb on + strand, within GFF1323 at 661.924 kb on - strand, within GFF1323 at 661.924 kb on - strand, within GFF1323 at 661.924 kb on - strand, within GFF1323 at 661.924 kb on - strand, within GFF1323 at 661.924 kb on - strand, within GFF1323 at 661.924 kb on - strand, within GFF1323 at 661.924 kb on - strand, within GFF1323 at 661.924 kb on - strand, within GFF1323 at 661.924 kb on - strand, within GFF1323 at 661.924 kb on - strand, within GFF1323 at 661.924 kb on - strand, within GFF1323 at 661.924 kb on - strand, within GFF1323 at 661.924 kb on - strand, within GFF1323 at 661.924 kb on - strand, within GFF1323 at 661.924 kb on - strand, within GFF1323 at 661.924 kb on - strand, within GFF1323 at 661.924 kb on - strand, within GFF1323 at 661.986 kb on + strand at 661.986 kb on + strand at 661.986 kb on + strand at 661.986 kb on + strand at 661.986 kb on + strand at 661.987 kb on - strand at 661.987 kb on - strand at 661.987 kb on - strand at 661.987 kb on - strand at 661.987 kb on - strand at 661.987 kb on - strand at 662.052 kb on + strand at 662.052 kb on + strand at 662.052 kb on + strand at 662.053 kb on - strand at 662.053 kb on - strand at 662.053 kb on - strand at 662.053 kb on - strand at 662.053 kb on - strand at 662.053 kb on - strand at 662.056 kb on + strand at 662.056 kb on + strand at 662.056 kb on + strand at 662.056 kb on + strand at 662.056 kb on + strand at 662.056 kb on + strand at 662.057 kb on - strand at 662.057 kb on - strand at 662.057 kb on - strand at 662.057 kb on - strand at 662.057 kb on - strand at 662.057 kb on - strand at 662.057 kb on - strand at 662.140 kb on + strand at 662.140 kb on + strand at 662.141 kb on - strand at 662.141 kb on - strand at 662.216 kb on + strand at 662.216 kb on + strand at 662.216 kb on + strand at 662.216 kb on + strand at 662.216 kb on + strand at 662.392 kb on + strand at 662.393 kb on - strand at 662.427 kb on + strand at 662.428 kb on - strand at 662.542 kb on + strand at 662.542 kb on + strand at 662.543 kb on - strand at 662.797 kb on + strand, within GFF1324 at 662.798 kb on - strand, within GFF1324 at 662.998 kb on + strand, within GFF1324 at 662.998 kb on + strand, within GFF1324 at 662.998 kb on + strand, within GFF1324 at 662.998 kb on + strand, within GFF1324 at 662.999 kb on - strand, within GFF1324 at 663.376 kb on + strand, within GFF1324 at 663.377 kb on - strand, within GFF1324 at 663.388 kb on + strand, within GFF1324 at 663.388 kb on + strand, within GFF1324 at 663.389 kb on - strand, within GFF1324 at 663.434 kb on - strand, within GFF1324 at 663.865 kb on + strand, within GFF1324 at 663.865 kb on + strand, within GFF1324 at 663.866 kb on - strand, within GFF1324 at 664.273 kb on + strand, within GFF1324 at 664.273 kb on + strand, within GFF1324 at 664.273 kb on + strand, within GFF1324 at 665.486 kb on - strand, within GFF1324 at 665.486 kb on - strand, within GFF1324 at 665.599 kb on + strand, within GFF1324 at 665.600 kb on - strand, within GFF1324 at 665.999 kb on - strand at 665.999 kb on - strand at 666.346 kb on + strand, within GFF1325 at 666.346 kb on + strand, within GFF1325 at 666.347 kb on - strand, within GFF1325 at 666.347 kb on - strand, within GFF1325 at 666.347 kb on - strand, within GFF1325 at 666.390 kb on + strand, within GFF1325 at 666.390 kb on + strand, within GFF1325 at 666.390 kb on + strand, within GFF1325 at 666.390 kb on + strand, within GFF1325 at 666.390 kb on + strand, within GFF1325 at 666.390 kb on + strand, within GFF1325 at 666.390 kb on + strand, within GFF1325 at 666.390 kb on + strand, within GFF1325 at 666.390 kb on + strand, within GFF1325 at 666.390 kb on + strand, within GFF1325 at 666.390 kb on + strand, within GFF1325 at 666.390 kb on + strand, within GFF1325 at 666.391 kb on - strand, within GFF1325 at 666.391 kb on - strand, within GFF1325 at 666.391 kb on - strand, within GFF1325 at 666.391 kb on - strand, within GFF1325 at 666.391 kb on - strand, within GFF1325 at 666.572 kb on - strand at 666.607 kb on + strand at 666.607 kb on + strand at 666.607 kb on + strand at 666.607 kb on + strand at 666.607 kb on + strand at 666.607 kb on + strand at 666.955 kb on + strand, within GFF1326 at 666.955 kb on + strand, within GFF1326 at 666.955 kb on + strand, within GFF1326 at 666.955 kb on + strand, within GFF1326 at 666.955 kb on + strand, within GFF1326 at 666.955 kb on + strand, within GFF1326 at 666.955 kb on + strand, within GFF1326 at 666.955 kb on + strand, within GFF1326 at 666.955 kb on + strand, within GFF1326 at 666.955 kb on + strand, within GFF1326 at 666.956 kb on - strand, within GFF1326 at 666.956 kb on - strand, within GFF1326 at 666.956 kb on - strand, within GFF1326 at 666.956 kb on - strand, within GFF1326 at 666.956 kb on - strand, within GFF1326 at 666.956 kb on - strand, within GFF1326 at 666.956 kb on - strand, within GFF1326 at 666.956 kb on - strand, within GFF1326 at 666.991 kb on + strand, within GFF1326 at 666.992 kb on - strand, within GFF1326 at 667.036 kb on + strand, within GFF1326 at 667.036 kb on + strand, within GFF1326 at 667.036 kb on + strand, within GFF1326 at 667.036 kb on + strand, within GFF1326 at 667.036 kb on + strand, within GFF1326 at 667.037 kb on - strand, within GFF1326 at 667.037 kb on - strand, within GFF1326 at 667.037 kb on - strand, within GFF1326 at 667.037 kb on - strand, within GFF1326 at 667.037 kb on - strand, within GFF1326 at 667.037 kb on - strand, within GFF1326 at 667.037 kb on - strand, within GFF1326 at 667.037 kb on - strand, within GFF1326 at 667.037 kb on - strand, within GFF1326 at 667.037 kb on - strand, within GFF1326 at 667.096 kb on + strand, within GFF1326 at 667.096 kb on + strand, within GFF1326 at 667.096 kb on + strand, within GFF1326 at 667.097 kb on - strand, within GFF1326 at 667.097 kb on - strand, within GFF1326 at 667.097 kb on - strand, within GFF1326 at 667.097 kb on - strand, within GFF1326
Per-strain Table
Position Strand Gene LocusTag Fraction no phage control remove 661,389 + GFF1323 0.18 +0.0 661,389 + GFF1323 0.18 -0.3 661,389 + GFF1323 0.18 +0.0 661,389 + GFF1323 0.18 -0.5 661,390 - GFF1323 0.18 -0.2 661,390 - GFF1323 0.18 -0.3 661,390 - GFF1323 0.18 +0.2 661,500 + GFF1323 0.31 +0.1 661,501 - GFF1323 0.32 -0.6 661,501 - GFF1323 0.32 +1.8 661,501 - GFF1323 0.32 -0.3 661,719 + GFF1323 0.58 -0.3 661,719 + GFF1323 0.58 +0.3 661,719 + GFF1323 0.58 +1.6 661,719 + GFF1323 0.58 -0.4 661,719 + GFF1323 0.58 +0.1 661,719 + GFF1323 0.58 +0.9 661,719 + GFF1323 0.58 -0.1 661,719 + GFF1323 0.58 +0.4 661,719 + GFF1323 0.58 -0.9 661,719 + GFF1323 0.58 -0.2 661,719 + GFF1323 0.58 -0.3 661,719 + GFF1323 0.58 -0.5 661,719 + GFF1323 0.58 +0.8 661,719 + GFF1323 0.58 -0.2 661,719 + GFF1323 0.58 -0.1 661,720 - GFF1323 0.58 -1.0 661,720 - GFF1323 0.58 -0.7 661,720 - GFF1323 0.58 +0.4 661,720 - GFF1323 0.58 +0.2 661,720 - GFF1323 0.58 -0.4 661,720 - GFF1323 0.58 +0.2 661,720 - GFF1323 0.58 -0.2 661,720 - GFF1323 0.58 -0.3 661,720 - GFF1323 0.58 -0.6 661,720 - GFF1323 0.58 +0.4 661,720 - GFF1323 0.58 +0.2 661,720 - GFF1323 0.58 -1.3 661,720 - GFF1323 0.58 +0.1 661,720 - GFF1323 0.58 -0.9 661,884 + GFF1323 0.78 -1.6 661,884 + GFF1323 0.78 -1.1 661,884 + GFF1323 0.78 -0.5 661,884 + GFF1323 0.78 -0.7 661,884 + GFF1323 0.78 -1.0 661,885 - GFF1323 0.78 -0.5 661,885 - GFF1323 0.78 -0.6 661,885 - GFF1323 0.78 -0.6 661,885 - GFF1323 0.78 +0.4 661,885 - GFF1323 0.78 +0.2 661,885 - GFF1323 0.78 -0.3 661,885 - GFF1323 0.78 -0.1 661,885 - GFF1323 0.78 -0.2 661,923 + GFF1323 0.83 +0.8 661,923 + GFF1323 0.83 -0.2 661,923 + GFF1323 0.83 +1.0 661,923 + GFF1323 0.83 -1.1 661,923 + GFF1323 0.83 -0.2 661,923 + GFF1323 0.83 -0.2 661,923 + GFF1323 0.83 -0.7 661,923 + GFF1323 0.83 +0.0 661,924 - GFF1323 0.83 +0.0 661,924 - GFF1323 0.83 +1.4 661,924 - GFF1323 0.83 +0.1 661,924 - GFF1323 0.83 -0.2 661,924 - GFF1323 0.83 +0.9 661,924 - GFF1323 0.83 +0.6 661,924 - GFF1323 0.83 -1.0 661,924 - GFF1323 0.83 +0.4 661,924 - GFF1323 0.83 -0.6 661,924 - GFF1323 0.83 -0.6 661,924 - GFF1323 0.83 +0.6 661,924 - GFF1323 0.83 -0.4 661,924 - GFF1323 0.83 +0.4 661,924 - GFF1323 0.83 -0.7 661,924 - GFF1323 0.83 -0.5 661,924 - GFF1323 0.83 +0.3 661,924 - GFF1323 0.83 -0.9 661,986 + -0.3 661,986 + -0.7 661,986 + +0.1 661,986 + -0.5 661,986 + -0.9 661,987 - -2.5 661,987 - -0.7 661,987 - -1.0 661,987 - -0.4 661,987 - -0.9 661,987 - -0.9 662,052 + -2.0 662,052 + +0.2 662,052 + -0.6 662,053 - -2.7 662,053 - -0.7 662,053 - -1.2 662,053 - -2.3 662,053 - -0.6 662,053 - +0.1 662,056 + +1.4 662,056 + -0.9 662,056 + -0.3 662,056 + -0.0 662,056 + +0.3 662,056 + -0.7 662,057 - -0.9 662,057 - -1.1 662,057 - +0.2 662,057 - +0.8 662,057 - -0.9 662,057 - -0.9 662,057 - +0.7 662,140 + +1.4 662,140 + -0.6 662,141 - -1.4 662,141 - -1.5 662,216 + -0.7 662,216 + +1.4 662,216 + -0.1 662,216 + -0.8 662,216 + +0.2 662,392 + -1.4 662,393 - -0.4 662,427 + -0.2 662,428 - -1.2 662,542 + -0.6 662,542 + -0.4 662,543 - +2.4 662,797 + GFF1324 0.15 +0.7 662,798 - GFF1324 0.15 -0.9 662,998 + GFF1324 0.20 -0.9 662,998 + GFF1324 0.20 -1.4 662,998 + GFF1324 0.20 +0.4 662,998 + GFF1324 0.20 -1.2 662,999 - GFF1324 0.20 -0.9 663,376 + GFF1324 0.29 +0.4 663,377 - GFF1324 0.29 -1.7 663,388 + GFF1324 0.29 -0.2 663,388 + GFF1324 0.29 -1.5 663,389 - GFF1324 0.29 -0.2 663,434 - GFF1324 0.31 -0.6 663,865 + GFF1324 0.41 +0.4 663,865 + GFF1324 0.41 -0.2 663,866 - GFF1324 0.41 -1.4 664,273 + GFF1324 0.52 -0.9 664,273 + GFF1324 0.52 -0.2 664,273 + GFF1324 0.52 -0.2 665,486 - GFF1324 0.82 -1.2 665,486 - GFF1324 0.82 -1.4 665,599 + GFF1324 0.85 -0.6 665,600 - GFF1324 0.85 +0.4 665,999 - -0.2 665,999 - -1.2 666,346 + GFF1325 0.48 -0.5 666,346 + GFF1325 0.48 +0.0 666,347 - GFF1325 0.49 -0.5 666,347 - GFF1325 0.49 +0.4 666,347 - GFF1325 0.49 +0.2 666,390 + GFF1325 0.62 +1.1 666,390 + GFF1325 0.62 +0.3 666,390 + GFF1325 0.62 -0.6 666,390 + GFF1325 0.62 -0.4 666,390 + GFF1325 0.62 -0.4 666,390 + GFF1325 0.62 +0.8 666,390 + GFF1325 0.62 -0.5 666,390 + GFF1325 0.62 +0.0 666,390 + GFF1325 0.62 -0.1 666,390 + GFF1325 0.62 -0.2 666,390 + GFF1325 0.62 +2.2 666,390 + GFF1325 0.62 +0.1 666,391 - GFF1325 0.63 +0.2 666,391 - GFF1325 0.63 +0.8 666,391 - GFF1325 0.63 -0.4 666,391 - GFF1325 0.63 +0.1 666,391 - GFF1325 0.63 -1.2 666,572 - +0.1 666,607 + -0.7 666,607 + -0.4 666,607 + -0.7 666,607 + -1.4 666,607 + +0.3 666,607 + -0.4 666,955 + GFF1326 0.49 +0.4 666,955 + GFF1326 0.49 -0.3 666,955 + GFF1326 0.49 -1.0 666,955 + GFF1326 0.49 +0.1 666,955 + GFF1326 0.49 +0.4 666,955 + GFF1326 0.49 +0.0 666,955 + GFF1326 0.49 +1.2 666,955 + GFF1326 0.49 +0.3 666,955 + GFF1326 0.49 +0.7 666,955 + GFF1326 0.49 +0.2 666,956 - GFF1326 0.49 +0.3 666,956 - GFF1326 0.49 -0.2 666,956 - GFF1326 0.49 +0.5 666,956 - GFF1326 0.49 -0.2 666,956 - GFF1326 0.49 -0.1 666,956 - GFF1326 0.49 -1.0 666,956 - GFF1326 0.49 +0.6 666,956 - GFF1326 0.49 -0.1 666,991 + GFF1326 0.54 -0.1 666,992 - GFF1326 0.54 -0.2 667,036 + GFF1326 0.59 -0.6 667,036 + GFF1326 0.59 -0.9 667,036 + GFF1326 0.59 -1.2 667,036 + GFF1326 0.59 +0.0 667,036 + GFF1326 0.59 +0.8 667,037 - GFF1326 0.59 +1.2 667,037 - GFF1326 0.59 +0.4 667,037 - GFF1326 0.59 -0.9 667,037 - GFF1326 0.59 -0.6 667,037 - GFF1326 0.59 -0.1 667,037 - GFF1326 0.59 -0.3 667,037 - GFF1326 0.59 -0.2 667,037 - GFF1326 0.59 -0.5 667,037 - GFF1326 0.59 +0.4 667,037 - GFF1326 0.59 -0.4 667,096 + GFF1326 0.67 +0.3 667,096 + GFF1326 0.67 +0.7 667,096 + GFF1326 0.67 -0.4 667,097 - GFF1326 0.67 -0.7 667,097 - GFF1326 0.67 +1.2 667,097 - GFF1326 0.67 -0.6 667,097 - GFF1326 0.67 -0.8
Or see this region's nucleotide sequence