Experiment: no phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF125 and GFF126 are separated by 32 nucleotides GFF126 and GFF127 are separated by 23 nucleotides GFF127 and GFF128 are separated by 31 nucleotides GFF128 and GFF129 are separated by 180 nucleotides
GFF125 - Dihydroorotase (EC 3.5.2.3), at 153,927 to 154,979
GFF125
GFF126 - Repressor homolog, at 155,012 to 155,920
GFF126
GFF127 - Orotate phosphoribosyltransferase (EC 2.4.2.10), at 155,944 to 156,627
GFF127
GFF128 - hypothetical protein, at 156,659 to 156,985
GFF128
GFF129 - Ankyrin, at 157,166 to 158,812
GFF129
Position (kb) 155
156
157 Strain fitness (log2 ratio) -2
-1
0
1 at 154.975 kb on + strand at 154.976 kb on - strand at 154.977 kb on + strand at 154.978 kb on - strand at 154.978 kb on - strand at 154.978 kb on - strand at 154.978 kb on - strand at 155.238 kb on + strand, within GFF126 at 155.239 kb on - strand, within GFF126 at 155.258 kb on + strand, within GFF126 at 155.258 kb on + strand, within GFF126 at 155.259 kb on - strand, within GFF126 at 155.367 kb on - strand, within GFF126 at 155.864 kb on + strand at 155.864 kb on + strand at 156.253 kb on + strand, within GFF127 at 156.254 kb on - strand, within GFF127 at 156.254 kb on - strand, within GFF127 at 156.625 kb on + strand at 156.728 kb on + strand, within GFF128 at 156.728 kb on + strand, within GFF128 at 156.729 kb on - strand, within GFF128 at 156.779 kb on + strand, within GFF128 at 156.809 kb on + strand, within GFF128 at 156.809 kb on + strand, within GFF128 at 156.810 kb on - strand, within GFF128 at 156.810 kb on - strand, within GFF128 at 156.821 kb on + strand, within GFF128 at 156.822 kb on - strand, within GFF128 at 156.822 kb on - strand, within GFF128 at 156.959 kb on + strand at 156.959 kb on + strand at 156.959 kb on + strand at 157.469 kb on + strand, within GFF129 at 157.469 kb on + strand, within GFF129 at 157.469 kb on + strand, within GFF129 at 157.470 kb on - strand, within GFF129 at 157.470 kb on - strand, within GFF129 at 157.565 kb on + strand, within GFF129 at 157.566 kb on - strand, within GFF129
Per-strain Table
Position Strand Gene LocusTag Fraction no phage control remove 154,975 + -1.1 154,976 - -0.5 154,977 + -0.2 154,978 - -1.1 154,978 - -0.2 154,978 - -0.6 154,978 - -0.1 155,238 + GFF126 0.25 -2.1 155,239 - GFF126 0.25 +1.0 155,258 + GFF126 0.27 -0.5 155,258 + GFF126 0.27 +0.6 155,259 - GFF126 0.27 -0.6 155,367 - GFF126 0.39 +0.1 155,864 + -0.1 155,864 + +0.2 156,253 + GFF127 0.45 -0.6 156,254 - GFF127 0.45 -0.9 156,254 - GFF127 0.45 -1.3 156,625 + +1.2 156,728 + GFF128 0.21 -0.5 156,728 + GFF128 0.21 -0.9 156,729 - GFF128 0.21 -0.0 156,779 + GFF128 0.37 +0.2 156,809 + GFF128 0.46 -0.6 156,809 + GFF128 0.46 +0.7 156,810 - GFF128 0.46 +0.1 156,810 - GFF128 0.46 -0.2 156,821 + GFF128 0.50 -0.7 156,822 - GFF128 0.50 -0.9 156,822 - GFF128 0.50 -1.4 156,959 + -1.3 156,959 + -0.0 156,959 + -0.2 157,469 + GFF129 0.18 -0.0 157,469 + GFF129 0.18 +0.0 157,469 + GFF129 0.18 +0.1 157,470 - GFF129 0.18 -0.5 157,470 - GFF129 0.18 +0.7 157,565 + GFF129 0.24 -0.4 157,566 - GFF129 0.24 +0.8
Or see this region's nucleotide sequence