Experiment: no phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1177 and GFF1178 are separated by 23 nucleotides GFF1178 and GFF1179 are separated by 6 nucleotides
GFF1177 - Serine protease, at 493,480 to 494,967
GFF1177
GFF1178 - hypothetical protein, at 494,991 to 495,332
GFF1178
GFF1179 - no description, at 495,339 to 497,222
GFF1179
Position (kb) 494
495
496 Strain fitness (log2 ratio) -1
0
1 at 494.164 kb on + strand, within GFF1177 at 494.164 kb on + strand, within GFF1177 at 494.164 kb on + strand, within GFF1177 at 494.164 kb on + strand, within GFF1177 at 494.164 kb on + strand, within GFF1177 at 494.164 kb on + strand, within GFF1177 at 494.164 kb on + strand, within GFF1177 at 494.164 kb on + strand, within GFF1177 at 494.164 kb on + strand, within GFF1177 at 494.164 kb on + strand, within GFF1177 at 494.164 kb on + strand, within GFF1177 at 494.164 kb on + strand, within GFF1177 at 494.164 kb on + strand, within GFF1177 at 494.164 kb on + strand, within GFF1177 at 494.165 kb on - strand, within GFF1177 at 494.165 kb on - strand, within GFF1177 at 494.165 kb on - strand, within GFF1177 at 494.165 kb on - strand, within GFF1177 at 494.165 kb on - strand, within GFF1177 at 494.165 kb on - strand, within GFF1177 at 494.264 kb on + strand, within GFF1177 at 494.265 kb on - strand, within GFF1177 at 494.265 kb on - strand, within GFF1177 at 494.265 kb on - strand, within GFF1177 at 494.266 kb on + strand, within GFF1177 at 494.266 kb on + strand, within GFF1177 at 494.266 kb on + strand, within GFF1177 at 494.266 kb on + strand, within GFF1177 at 494.266 kb on + strand, within GFF1177 at 494.267 kb on - strand, within GFF1177 at 494.267 kb on - strand, within GFF1177 at 494.267 kb on - strand, within GFF1177 at 494.267 kb on - strand, within GFF1177 at 494.267 kb on - strand, within GFF1177 at 495.214 kb on + strand, within GFF1178 at 495.216 kb on + strand, within GFF1178 at 495.405 kb on + strand at 495.406 kb on - strand at 495.453 kb on + strand at 495.772 kb on + strand, within GFF1179 at 495.772 kb on + strand, within GFF1179 at 495.772 kb on + strand, within GFF1179 at 495.772 kb on + strand, within GFF1179 at 495.773 kb on - strand, within GFF1179 at 495.773 kb on - strand, within GFF1179 at 495.773 kb on - strand, within GFF1179 at 495.773 kb on - strand, within GFF1179 at 496.048 kb on + strand, within GFF1179 at 496.049 kb on - strand, within GFF1179 at 496.049 kb on - strand, within GFF1179 at 496.049 kb on - strand, within GFF1179 at 496.069 kb on + strand, within GFF1179 at 496.069 kb on + strand, within GFF1179 at 496.077 kb on + strand, within GFF1179 at 496.077 kb on + strand, within GFF1179 at 496.135 kb on + strand, within GFF1179 at 496.136 kb on - strand, within GFF1179 at 496.136 kb on - strand, within GFF1179 at 496.194 kb on + strand, within GFF1179 at 496.194 kb on + strand, within GFF1179 at 496.195 kb on - strand, within GFF1179 at 496.195 kb on - strand, within GFF1179 at 496.195 kb on - strand, within GFF1179 at 496.258 kb on + strand, within GFF1179 at 496.267 kb on + strand, within GFF1179 at 496.267 kb on + strand, within GFF1179 at 496.267 kb on + strand, within GFF1179 at 496.267 kb on + strand, within GFF1179 at 496.267 kb on + strand, within GFF1179 at 496.267 kb on + strand, within GFF1179 at 496.268 kb on - strand, within GFF1179 at 496.268 kb on - strand, within GFF1179 at 496.268 kb on - strand, within GFF1179
Per-strain Table
Position Strand Gene LocusTag Fraction no phage control remove 494,164 + GFF1177 0.46 +0.8 494,164 + GFF1177 0.46 -1.1 494,164 + GFF1177 0.46 -0.4 494,164 + GFF1177 0.46 +0.2 494,164 + GFF1177 0.46 +0.0 494,164 + GFF1177 0.46 -1.0 494,164 + GFF1177 0.46 +1.1 494,164 + GFF1177 0.46 +0.2 494,164 + GFF1177 0.46 -0.5 494,164 + GFF1177 0.46 -0.8 494,164 + GFF1177 0.46 +1.5 494,164 + GFF1177 0.46 +1.1 494,164 + GFF1177 0.46 -0.2 494,164 + GFF1177 0.46 +0.1 494,165 - GFF1177 0.46 -0.7 494,165 - GFF1177 0.46 +0.2 494,165 - GFF1177 0.46 +0.5 494,165 - GFF1177 0.46 +0.9 494,165 - GFF1177 0.46 +0.7 494,165 - GFF1177 0.46 -0.0 494,264 + GFF1177 0.53 +0.5 494,265 - GFF1177 0.53 -1.5 494,265 - GFF1177 0.53 -1.0 494,265 - GFF1177 0.53 +0.0 494,266 + GFF1177 0.53 -0.1 494,266 + GFF1177 0.53 +0.3 494,266 + GFF1177 0.53 +0.7 494,266 + GFF1177 0.53 -0.5 494,266 + GFF1177 0.53 -0.3 494,267 - GFF1177 0.53 -0.7 494,267 - GFF1177 0.53 -0.6 494,267 - GFF1177 0.53 -0.3 494,267 - GFF1177 0.53 -0.7 494,267 - GFF1177 0.53 -0.5 495,214 + GFF1178 0.65 -1.6 495,216 + GFF1178 0.66 -0.7 495,405 + -0.8 495,406 - -0.1 495,453 + +0.1 495,772 + GFF1179 0.23 +1.1 495,772 + GFF1179 0.23 +0.5 495,772 + GFF1179 0.23 -1.6 495,772 + GFF1179 0.23 +0.5 495,773 - GFF1179 0.23 -0.1 495,773 - GFF1179 0.23 -0.2 495,773 - GFF1179 0.23 +0.1 495,773 - GFF1179 0.23 -0.2 496,048 + GFF1179 0.38 -0.7 496,049 - GFF1179 0.38 +0.5 496,049 - GFF1179 0.38 -0.4 496,049 - GFF1179 0.38 -0.1 496,069 + GFF1179 0.39 +0.1 496,069 + GFF1179 0.39 -0.5 496,077 + GFF1179 0.39 -0.8 496,077 + GFF1179 0.39 -0.6 496,135 + GFF1179 0.42 -0.8 496,136 - GFF1179 0.42 +0.9 496,136 - GFF1179 0.42 -0.1 496,194 + GFF1179 0.45 -0.4 496,194 + GFF1179 0.45 -0.5 496,195 - GFF1179 0.45 -0.3 496,195 - GFF1179 0.45 -0.3 496,195 - GFF1179 0.45 +0.1 496,258 + GFF1179 0.49 +0.9 496,267 + GFF1179 0.49 +0.2 496,267 + GFF1179 0.49 +0.6 496,267 + GFF1179 0.49 -0.2 496,267 + GFF1179 0.49 +0.5 496,267 + GFF1179 0.49 +0.7 496,267 + GFF1179 0.49 +0.1 496,268 - GFF1179 0.49 -1.4 496,268 - GFF1179 0.49 +1.5 496,268 - GFF1179 0.49 -0.3
Or see this region's nucleotide sequence