Experiment: HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS03260 and A4249_RS03265 are separated by 283 nucleotides A4249_RS03265 and A4249_RS03270 are separated by 100 nucleotides
A4249_RS03260: A4249_RS03260 - acyltransferase, at 685,689 to 686,849
_RS03260
A4249_RS03265: A4249_RS03265 - metal-sensitive transcriptional regulator, at 687,133 to 687,408
_RS03265
A4249_RS03270: A4249_RS03270 - heavy metal translocating P-type ATPase, at 687,509 to 689,863
_RS03270
Position (kb) 687
688 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 686.173 kb on + strand, within A4249_RS03260 at 686.173 kb on + strand, within A4249_RS03260 at 686.173 kb on + strand, within A4249_RS03260 at 686.174 kb on - strand, within A4249_RS03260 at 686.174 kb on - strand, within A4249_RS03260 at 686.174 kb on - strand, within A4249_RS03260 at 686.266 kb on + strand, within A4249_RS03260 at 686.266 kb on + strand, within A4249_RS03260 at 686.266 kb on + strand, within A4249_RS03260 at 686.266 kb on + strand, within A4249_RS03260 at 686.266 kb on + strand, within A4249_RS03260 at 686.267 kb on - strand, within A4249_RS03260 at 686.267 kb on - strand, within A4249_RS03260 at 686.267 kb on - strand, within A4249_RS03260 at 686.267 kb on - strand, within A4249_RS03260 at 686.371 kb on + strand, within A4249_RS03260 at 686.371 kb on + strand, within A4249_RS03260 at 686.372 kb on - strand, within A4249_RS03260 at 686.372 kb on - strand, within A4249_RS03260 at 686.372 kb on - strand, within A4249_RS03260 at 686.641 kb on + strand, within A4249_RS03260 at 686.641 kb on + strand, within A4249_RS03260 at 686.641 kb on + strand, within A4249_RS03260 at 686.642 kb on - strand, within A4249_RS03260 at 686.642 kb on - strand, within A4249_RS03260 at 686.642 kb on - strand, within A4249_RS03260 at 686.642 kb on - strand, within A4249_RS03260 at 686.750 kb on - strand at 686.892 kb on + strand at 686.892 kb on + strand at 686.892 kb on + strand at 686.900 kb on + strand at 686.900 kb on + strand at 686.900 kb on + strand at 686.900 kb on + strand at 686.900 kb on + strand at 686.901 kb on - strand at 686.901 kb on - strand at 686.956 kb on + strand at 686.956 kb on + strand at 686.957 kb on - strand at 686.957 kb on - strand at 686.957 kb on - strand at 686.957 kb on - strand at 687.315 kb on - strand, within A4249_RS03265 at 687.361 kb on + strand, within A4249_RS03265 at 687.362 kb on - strand, within A4249_RS03265 at 687.437 kb on + strand at 687.437 kb on + strand at 687.437 kb on + strand at 687.437 kb on + strand at 687.437 kb on + strand at 687.438 kb on - strand at 687.438 kb on - strand at 687.438 kb on - strand at 687.438 kb on - strand at 687.438 kb on - strand at 687.477 kb on + strand at 687.478 kb on - strand at 687.478 kb on - strand at 687.485 kb on - strand at 687.514 kb on + strand at 687.514 kb on + strand at 687.514 kb on + strand at 687.514 kb on + strand at 687.514 kb on + strand at 687.514 kb on + strand at 687.515 kb on - strand at 687.515 kb on - strand at 687.515 kb on - strand at 687.515 kb on - strand at 687.515 kb on - strand at 687.515 kb on - strand at 687.659 kb on + strand at 687.659 kb on + strand at 687.659 kb on + strand at 687.659 kb on + strand at 687.659 kb on + strand at 687.659 kb on + strand at 687.659 kb on + strand at 687.659 kb on + strand at 687.659 kb on + strand at 687.659 kb on + strand at 687.659 kb on + strand at 687.659 kb on + strand at 687.659 kb on + strand at 687.659 kb on + strand at 687.659 kb on + strand at 687.659 kb on + strand at 687.659 kb on + strand at 687.659 kb on + strand at 687.659 kb on + strand at 687.659 kb on + strand at 687.659 kb on + strand at 687.659 kb on + strand at 687.659 kb on + strand at 687.659 kb on + strand at 687.660 kb on - strand at 687.660 kb on - strand at 687.660 kb on - strand at 687.660 kb on - strand at 687.660 kb on - strand at 687.660 kb on - strand at 687.660 kb on - strand at 687.660 kb on - strand at 687.660 kb on - strand at 687.660 kb on - strand at 687.660 kb on - strand at 687.660 kb on - strand at 687.714 kb on - strand at 687.714 kb on - strand at 687.714 kb on - strand at 687.714 kb on - strand at 687.714 kb on - strand at 687.761 kb on + strand, within A4249_RS03270 at 687.761 kb on + strand, within A4249_RS03270 at 687.761 kb on + strand, within A4249_RS03270 at 687.761 kb on + strand, within A4249_RS03270 at 687.761 kb on + strand, within A4249_RS03270 at 687.761 kb on + strand, within A4249_RS03270 at 687.761 kb on + strand, within A4249_RS03270 at 687.761 kb on + strand, within A4249_RS03270 at 687.761 kb on + strand, within A4249_RS03270 at 687.762 kb on - strand, within A4249_RS03270 at 687.762 kb on - strand, within A4249_RS03270 at 687.762 kb on - strand, within A4249_RS03270 at 687.762 kb on - strand, within A4249_RS03270 at 687.762 kb on - strand, within A4249_RS03270 at 687.762 kb on - strand, within A4249_RS03270 at 687.762 kb on - strand, within A4249_RS03270 at 687.762 kb on - strand, within A4249_RS03270 at 687.762 kb on - strand, within A4249_RS03270 at 687.762 kb on - strand, within A4249_RS03270 at 687.762 kb on - strand, within A4249_RS03270 at 687.762 kb on - strand, within A4249_RS03270 at 688.133 kb on + strand, within A4249_RS03270 at 688.133 kb on + strand, within A4249_RS03270 at 688.133 kb on + strand, within A4249_RS03270 at 688.133 kb on + strand, within A4249_RS03270 at 688.134 kb on - strand, within A4249_RS03270 at 688.134 kb on - strand, within A4249_RS03270 at 688.134 kb on - strand, within A4249_RS03270 at 688.134 kb on - strand, within A4249_RS03270 at 688.134 kb on - strand, within A4249_RS03270 at 688.208 kb on + strand, within A4249_RS03270 at 688.208 kb on + strand, within A4249_RS03270 at 688.209 kb on - strand, within A4249_RS03270 at 688.209 kb on - strand, within A4249_RS03270 at 688.209 kb on - strand, within A4249_RS03270 at 688.209 kb on - strand, within A4249_RS03270 at 688.209 kb on - strand, within A4249_RS03270
Per-strain Table
Position Strand Gene LocusTag Fraction HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C) remove 686,173 + A4249_RS03260 0.42 +0.8 686,173 + A4249_RS03260 0.42 -1.3 686,173 + A4249_RS03260 0.42 -0.7 686,174 - A4249_RS03260 0.42 -0.6 686,174 - A4249_RS03260 0.42 +1.0 686,174 - A4249_RS03260 0.42 +0.7 686,266 + A4249_RS03260 0.50 +0.1 686,266 + A4249_RS03260 0.50 -0.2 686,266 + A4249_RS03260 0.50 -0.8 686,266 + A4249_RS03260 0.50 -0.3 686,266 + A4249_RS03260 0.50 -0.2 686,267 - A4249_RS03260 0.50 -0.6 686,267 - A4249_RS03260 0.50 -0.9 686,267 - A4249_RS03260 0.50 -0.8 686,267 - A4249_RS03260 0.50 -0.3 686,371 + A4249_RS03260 0.59 +0.7 686,371 + A4249_RS03260 0.59 +0.4 686,372 - A4249_RS03260 0.59 -0.3 686,372 - A4249_RS03260 0.59 -0.3 686,372 - A4249_RS03260 0.59 -0.1 686,641 + A4249_RS03260 0.82 -0.2 686,641 + A4249_RS03260 0.82 +0.3 686,641 + A4249_RS03260 0.82 -1.7 686,642 - A4249_RS03260 0.82 -0.1 686,642 - A4249_RS03260 0.82 +1.4 686,642 - A4249_RS03260 0.82 +1.0 686,642 - A4249_RS03260 0.82 -0.5 686,750 - +0.5 686,892 + +0.6 686,892 + -0.0 686,892 + +0.1 686,900 + +0.9 686,900 + -0.1 686,900 + -0.3 686,900 + +0.1 686,900 + +1.2 686,901 - -0.5 686,901 - -0.2 686,956 + -1.0 686,956 + -0.9 686,957 - -0.2 686,957 - +0.5 686,957 - -0.6 686,957 - +0.2 687,315 - A4249_RS03265 0.66 +0.2 687,361 + A4249_RS03265 0.83 +0.3 687,362 - A4249_RS03265 0.83 -0.4 687,437 + -0.3 687,437 + +0.0 687,437 + +0.5 687,437 + -0.3 687,437 + +1.8 687,438 - +0.4 687,438 - +1.0 687,438 - +0.8 687,438 - -0.4 687,438 - -0.3 687,477 + -0.3 687,478 - -0.9 687,478 - -0.1 687,485 - +0.9 687,514 + +1.2 687,514 + -0.8 687,514 + -0.6 687,514 + +0.5 687,514 + -0.3 687,514 + +0.8 687,515 - -0.2 687,515 - +0.1 687,515 - -1.8 687,515 - -0.1 687,515 - +0.9 687,515 - -0.9 687,659 + -1.6 687,659 + -0.2 687,659 + -0.4 687,659 + +0.5 687,659 + +1.8 687,659 + +1.2 687,659 + -0.6 687,659 + -1.0 687,659 + +0.2 687,659 + +0.0 687,659 + +0.2 687,659 + -0.7 687,659 + +0.2 687,659 + +0.3 687,659 + -0.1 687,659 + +0.3 687,659 + -0.2 687,659 + +1.3 687,659 + +0.1 687,659 + +0.3 687,659 + +1.2 687,659 + -0.6 687,659 + -0.6 687,659 + -1.3 687,660 - -0.8 687,660 - -0.2 687,660 - -0.2 687,660 - +0.8 687,660 - -0.3 687,660 - -0.3 687,660 - +0.1 687,660 - -0.6 687,660 - +0.8 687,660 - +0.6 687,660 - +0.4 687,660 - +0.5 687,714 - +0.2 687,714 - -0.2 687,714 - -0.2 687,714 - -0.8 687,714 - -0.7 687,761 + A4249_RS03270 0.11 +0.2 687,761 + A4249_RS03270 0.11 -0.6 687,761 + A4249_RS03270 0.11 -0.2 687,761 + A4249_RS03270 0.11 +1.0 687,761 + A4249_RS03270 0.11 +1.0 687,761 + A4249_RS03270 0.11 -0.0 687,761 + A4249_RS03270 0.11 -0.3 687,761 + A4249_RS03270 0.11 -0.2 687,761 + A4249_RS03270 0.11 -0.0 687,762 - A4249_RS03270 0.11 -0.3 687,762 - A4249_RS03270 0.11 -0.2 687,762 - A4249_RS03270 0.11 +1.4 687,762 - A4249_RS03270 0.11 +0.2 687,762 - A4249_RS03270 0.11 -0.1 687,762 - A4249_RS03270 0.11 +0.3 687,762 - A4249_RS03270 0.11 -0.1 687,762 - A4249_RS03270 0.11 +0.5 687,762 - A4249_RS03270 0.11 +2.0 687,762 - A4249_RS03270 0.11 +1.1 687,762 - A4249_RS03270 0.11 -1.6 687,762 - A4249_RS03270 0.11 -1.6 688,133 + A4249_RS03270 0.26 -1.0 688,133 + A4249_RS03270 0.26 -0.7 688,133 + A4249_RS03270 0.26 -0.5 688,133 + A4249_RS03270 0.26 -0.5 688,134 - A4249_RS03270 0.27 -0.2 688,134 - A4249_RS03270 0.27 +0.3 688,134 - A4249_RS03270 0.27 -1.0 688,134 - A4249_RS03270 0.27 -0.4 688,134 - A4249_RS03270 0.27 -2.8 688,208 + A4249_RS03270 0.30 -1.2 688,208 + A4249_RS03270 0.30 -1.0 688,209 - A4249_RS03270 0.30 -0.5 688,209 - A4249_RS03270 0.30 -0.1 688,209 - A4249_RS03270 0.30 -0.1 688,209 - A4249_RS03270 0.30 -0.1 688,209 - A4249_RS03270 0.30 +0.5
Or see this region's nucleotide sequence