Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS00710

Experiment: HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS00700 and A4249_RS00705 are separated by 54 nucleotidesA4249_RS00705 and A4249_RS00710 are separated by 70 nucleotidesA4249_RS00710 and A4249_RS00715 are separated by 128 nucleotides A4249_RS00700: A4249_RS00700 - hypothetical protein, at 129,307 to 129,507 _RS00700 A4249_RS00705: A4249_RS00705 - glutathione S-transferase, at 129,562 to 130,227 _RS00705 A4249_RS00710: A4249_RS00710 - hypothetical protein, at 130,298 to 130,498 _RS00710 A4249_RS00715: A4249_RS00715 - cation:dicarboxylase symporter family transporter, at 130,627 to 131,925 _RS00715 Position (kb) 130 131Strain fitness (log2 ratio) -2 -1 0 1 2at 129.358 kb on + strand, within A4249_RS00700at 129.358 kb on + strand, within A4249_RS00700at 129.359 kb on - strand, within A4249_RS00700at 129.359 kb on - strand, within A4249_RS00700at 129.369 kb on - strand, within A4249_RS00700at 129.369 kb on - strand, within A4249_RS00700at 129.516 kb on - strandat 129.569 kb on + strandat 129.569 kb on + strandat 129.569 kb on + strandat 129.569 kb on + strandat 129.569 kb on + strandat 129.569 kb on + strandat 129.569 kb on + strandat 129.569 kb on + strandat 129.569 kb on + strandat 129.570 kb on - strandat 129.570 kb on - strandat 129.570 kb on - strandat 129.570 kb on - strandat 129.570 kb on - strandat 129.575 kb on + strandat 129.606 kb on - strandat 129.890 kb on - strand, within A4249_RS00705at 129.890 kb on - strand, within A4249_RS00705at 129.890 kb on - strand, within A4249_RS00705at 129.929 kb on + strand, within A4249_RS00705at 129.929 kb on + strand, within A4249_RS00705at 129.929 kb on + strand, within A4249_RS00705at 129.929 kb on + strand, within A4249_RS00705at 129.929 kb on + strand, within A4249_RS00705at 129.930 kb on - strand, within A4249_RS00705at 129.930 kb on - strand, within A4249_RS00705at 129.930 kb on - strand, within A4249_RS00705at 129.930 kb on - strand, within A4249_RS00705at 129.930 kb on - strand, within A4249_RS00705at 129.930 kb on - strand, within A4249_RS00705at 129.941 kb on + strand, within A4249_RS00705at 129.941 kb on + strand, within A4249_RS00705at 129.941 kb on + strand, within A4249_RS00705at 129.942 kb on - strand, within A4249_RS00705at 129.942 kb on - strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 130.002 kb on + strand, within A4249_RS00705at 130.002 kb on + strand, within A4249_RS00705at 130.002 kb on + strand, within A4249_RS00705at 130.003 kb on - strand, within A4249_RS00705at 130.013 kb on + strand, within A4249_RS00705at 130.013 kb on + strand, within A4249_RS00705at 130.014 kb on - strand, within A4249_RS00705at 130.014 kb on - strand, within A4249_RS00705at 130.014 kb on - strand, within A4249_RS00705at 130.014 kb on - strand, within A4249_RS00705at 130.014 kb on - strand, within A4249_RS00705at 130.136 kb on + strand, within A4249_RS00705at 130.151 kb on + strand, within A4249_RS00705at 130.151 kb on + strand, within A4249_RS00705at 130.152 kb on - strand, within A4249_RS00705at 130.152 kb on - strand, within A4249_RS00705at 130.152 kb on - strand, within A4249_RS00705at 130.152 kb on - strand, within A4249_RS00705at 130.152 kb on - strand, within A4249_RS00705at 130.152 kb on - strand, within A4249_RS00705at 130.256 kb on + strandat 130.256 kb on + strandat 130.257 kb on - strandat 130.386 kb on + strand, within A4249_RS00710at 130.386 kb on + strand, within A4249_RS00710at 130.386 kb on + strand, within A4249_RS00710at 130.386 kb on + strand, within A4249_RS00710at 130.386 kb on + strand, within A4249_RS00710at 130.386 kb on + strand, within A4249_RS00710at 130.387 kb on - strand, within A4249_RS00710at 130.387 kb on - strand, within A4249_RS00710at 130.387 kb on - strand, within A4249_RS00710at 130.387 kb on - strand, within A4249_RS00710at 130.387 kb on - strand, within A4249_RS00710at 130.615 kb on + strandat 130.615 kb on + strandat 130.621 kb on + strandat 130.621 kb on + strandat 130.933 kb on + strand, within A4249_RS00715at 130.933 kb on + strand, within A4249_RS00715at 130.933 kb on + strand, within A4249_RS00715at 130.933 kb on + strand, within A4249_RS00715at 130.933 kb on + strand, within A4249_RS00715at 130.933 kb on + strand, within A4249_RS00715at 130.933 kb on + strand, within A4249_RS00715at 130.933 kb on + strand, within A4249_RS00715at 130.933 kb on + strand, within A4249_RS00715at 130.934 kb on - strand, within A4249_RS00715at 130.934 kb on - strand, within A4249_RS00715at 130.934 kb on - strand, within A4249_RS00715at 130.934 kb on - strand, within A4249_RS00715at 130.934 kb on - strand, within A4249_RS00715at 130.934 kb on - strand, within A4249_RS00715at 130.934 kb on - strand, within A4249_RS00715at 130.934 kb on - strand, within A4249_RS00715at 130.934 kb on - strand, within A4249_RS00715at 131.295 kb on - strand, within A4249_RS00715at 131.344 kb on + strand, within A4249_RS00715at 131.344 kb on + strand, within A4249_RS00715at 131.344 kb on + strand, within A4249_RS00715at 131.344 kb on + strand, within A4249_RS00715at 131.344 kb on + strand, within A4249_RS00715at 131.344 kb on + strand, within A4249_RS00715at 131.344 kb on + strand, within A4249_RS00715at 131.345 kb on - strand, within A4249_RS00715at 131.345 kb on - strand, within A4249_RS00715at 131.345 kb on - strand, within A4249_RS00715at 131.345 kb on - strand, within A4249_RS00715at 131.392 kb on + strand, within A4249_RS00715at 131.392 kb on + strand, within A4249_RS00715at 131.392 kb on + strand, within A4249_RS00715at 131.392 kb on + strand, within A4249_RS00715at 131.392 kb on + strand, within A4249_RS00715at 131.392 kb on + strand, within A4249_RS00715at 131.392 kb on + strand, within A4249_RS00715at 131.392 kb on + strand, within A4249_RS00715at 131.392 kb on + strand, within A4249_RS00715at 131.392 kb on + strand, within A4249_RS00715at 131.393 kb on - strand, within A4249_RS00715at 131.393 kb on - strand, within A4249_RS00715at 131.393 kb on - strand, within A4249_RS00715at 131.393 kb on - strand, within A4249_RS00715at 131.393 kb on - strand, within A4249_RS00715at 131.393 kb on - strand, within A4249_RS00715at 131.393 kb on - strand, within A4249_RS00715at 131.393 kb on - strand, within A4249_RS00715at 131.393 kb on - strand, within A4249_RS00715at 131.393 kb on - strand, within A4249_RS00715at 131.393 kb on - strand, within A4249_RS00715at 131.393 kb on - strand, within A4249_RS00715at 131.393 kb on - strand, within A4249_RS00715

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Per-strain Table

Position Strand Gene LocusTag Fraction HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
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129,358 + A4249_RS00700 0.25 -0.5
129,358 + A4249_RS00700 0.25 -0.8
129,359 - A4249_RS00700 0.26 +1.3
129,359 - A4249_RS00700 0.26 -0.3
129,369 - A4249_RS00700 0.31 +0.7
129,369 - A4249_RS00700 0.31 -1.0
129,516 - +1.3
129,569 + +0.1
129,569 + -0.5
129,569 + -0.3
129,569 + -0.5
129,569 + +0.3
129,569 + +0.5
129,569 + +0.4
129,569 + -0.1
129,569 + -0.3
129,570 - -0.5
129,570 - -0.9
129,570 - +0.6
129,570 - -0.4
129,570 - -0.2
129,575 + +1.6
129,606 - +0.6
129,890 - A4249_RS00705 0.49 +0.2
129,890 - A4249_RS00705 0.49 +0.3
129,890 - A4249_RS00705 0.49 +0.2
129,929 + A4249_RS00705 0.55 -0.5
129,929 + A4249_RS00705 0.55 -0.9
129,929 + A4249_RS00705 0.55 +0.5
129,929 + A4249_RS00705 0.55 -0.1
129,929 + A4249_RS00705 0.55 +0.4
129,930 - A4249_RS00705 0.55 +0.3
129,930 - A4249_RS00705 0.55 +0.1
129,930 - A4249_RS00705 0.55 +0.8
129,930 - A4249_RS00705 0.55 -1.2
129,930 - A4249_RS00705 0.55 -0.6
129,930 - A4249_RS00705 0.55 +0.1
129,941 + A4249_RS00705 0.57 +0.2
129,941 + A4249_RS00705 0.57 +1.4
129,941 + A4249_RS00705 0.57 -0.2
129,942 - A4249_RS00705 0.57 -1.3
129,942 - A4249_RS00705 0.57 -0.4
129,998 + A4249_RS00705 0.65 -1.4
129,998 + A4249_RS00705 0.65 -0.3
129,998 + A4249_RS00705 0.65 +0.4
129,998 + A4249_RS00705 0.65 -0.9
129,998 + A4249_RS00705 0.65 -0.9
129,998 + A4249_RS00705 0.65 -0.2
129,998 + A4249_RS00705 0.65 -0.6
129,998 + A4249_RS00705 0.65 -0.5
129,998 + A4249_RS00705 0.65 -1.0
129,998 + A4249_RS00705 0.65 +0.3
129,998 + A4249_RS00705 0.65 +1.0
129,998 + A4249_RS00705 0.65 +0.3
129,998 + A4249_RS00705 0.65 +0.5
129,998 + A4249_RS00705 0.65 -1.6
129,998 + A4249_RS00705 0.65 -1.0
129,998 + A4249_RS00705 0.65 +0.3
129,998 + A4249_RS00705 0.65 +0.5
129,999 - A4249_RS00705 0.66 -0.6
129,999 - A4249_RS00705 0.66 +0.4
129,999 - A4249_RS00705 0.66 -0.5
129,999 - A4249_RS00705 0.66 +0.6
129,999 - A4249_RS00705 0.66 -0.0
129,999 - A4249_RS00705 0.66 +0.1
129,999 - A4249_RS00705 0.66 -0.3
129,999 - A4249_RS00705 0.66 -0.3
129,999 - A4249_RS00705 0.66 -1.2
129,999 - A4249_RS00705 0.66 -0.4
129,999 - A4249_RS00705 0.66 -0.7
129,999 - A4249_RS00705 0.66 +0.4
129,999 - A4249_RS00705 0.66 +1.0
129,999 - A4249_RS00705 0.66 -0.1
129,999 - A4249_RS00705 0.66 -1.0
130,002 + A4249_RS00705 0.66 +0.5
130,002 + A4249_RS00705 0.66 -0.7
130,002 + A4249_RS00705 0.66 -0.2
130,003 - A4249_RS00705 0.66 -0.3
130,013 + A4249_RS00705 0.68 +0.8
130,013 + A4249_RS00705 0.68 -1.0
130,014 - A4249_RS00705 0.68 -0.4
130,014 - A4249_RS00705 0.68 -0.5
130,014 - A4249_RS00705 0.68 -1.6
130,014 - A4249_RS00705 0.68 -0.3
130,014 - A4249_RS00705 0.68 +1.0
130,136 + A4249_RS00705 0.86 -0.1
130,151 + A4249_RS00705 0.88 -0.3
130,151 + A4249_RS00705 0.88 -0.1
130,152 - A4249_RS00705 0.89 +0.5
130,152 - A4249_RS00705 0.89 -1.1
130,152 - A4249_RS00705 0.89 -1.2
130,152 - A4249_RS00705 0.89 +1.1
130,152 - A4249_RS00705 0.89 -0.6
130,152 - A4249_RS00705 0.89 -1.2
130,256 + -0.3
130,256 + -0.7
130,257 - +0.0
130,386 + A4249_RS00710 0.44 +0.3
130,386 + A4249_RS00710 0.44 -0.4
130,386 + A4249_RS00710 0.44 -1.7
130,386 + A4249_RS00710 0.44 -0.4
130,386 + A4249_RS00710 0.44 -1.0
130,386 + A4249_RS00710 0.44 +0.1
130,387 - A4249_RS00710 0.44 -0.5
130,387 - A4249_RS00710 0.44 -1.3
130,387 - A4249_RS00710 0.44 -0.9
130,387 - A4249_RS00710 0.44 +0.1
130,387 - A4249_RS00710 0.44 -1.0
130,615 + -0.6
130,615 + +0.0
130,621 + +0.3
130,621 + -0.3
130,933 + A4249_RS00715 0.24 +1.4
130,933 + A4249_RS00715 0.24 -0.4
130,933 + A4249_RS00715 0.24 -0.3
130,933 + A4249_RS00715 0.24 -1.1
130,933 + A4249_RS00715 0.24 -0.2
130,933 + A4249_RS00715 0.24 -0.2
130,933 + A4249_RS00715 0.24 +1.8
130,933 + A4249_RS00715 0.24 -0.0
130,933 + A4249_RS00715 0.24 +0.2
130,934 - A4249_RS00715 0.24 +0.4
130,934 - A4249_RS00715 0.24 +0.0
130,934 - A4249_RS00715 0.24 +0.7
130,934 - A4249_RS00715 0.24 -1.0
130,934 - A4249_RS00715 0.24 +0.0
130,934 - A4249_RS00715 0.24 +0.3
130,934 - A4249_RS00715 0.24 +0.3
130,934 - A4249_RS00715 0.24 +0.8
130,934 - A4249_RS00715 0.24 +0.3
131,295 - A4249_RS00715 0.51 -0.2
131,344 + A4249_RS00715 0.55 +0.2
131,344 + A4249_RS00715 0.55 +0.1
131,344 + A4249_RS00715 0.55 -0.9
131,344 + A4249_RS00715 0.55 -0.1
131,344 + A4249_RS00715 0.55 -1.2
131,344 + A4249_RS00715 0.55 -0.2
131,344 + A4249_RS00715 0.55 -0.3
131,345 - A4249_RS00715 0.55 -0.5
131,345 - A4249_RS00715 0.55 +0.8
131,345 - A4249_RS00715 0.55 -0.0
131,345 - A4249_RS00715 0.55 -0.5
131,392 + A4249_RS00715 0.59 +0.0
131,392 + A4249_RS00715 0.59 +1.4
131,392 + A4249_RS00715 0.59 -0.7
131,392 + A4249_RS00715 0.59 -0.9
131,392 + A4249_RS00715 0.59 +0.4
131,392 + A4249_RS00715 0.59 -1.0
131,392 + A4249_RS00715 0.59 -0.4
131,392 + A4249_RS00715 0.59 -0.1
131,392 + A4249_RS00715 0.59 +0.7
131,392 + A4249_RS00715 0.59 +0.9
131,393 - A4249_RS00715 0.59 +1.0
131,393 - A4249_RS00715 0.59 -1.4
131,393 - A4249_RS00715 0.59 -0.0
131,393 - A4249_RS00715 0.59 -0.0
131,393 - A4249_RS00715 0.59 -1.9
131,393 - A4249_RS00715 0.59 -0.7
131,393 - A4249_RS00715 0.59 -0.0
131,393 - A4249_RS00715 0.59 -1.3
131,393 - A4249_RS00715 0.59 +0.6
131,393 - A4249_RS00715 0.59 +0.5
131,393 - A4249_RS00715 0.59 +0.4
131,393 - A4249_RS00715 0.59 -1.6
131,393 - A4249_RS00715 0.59 +0.4

Or see this region's nucleotide sequence