Experiment: no phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF726 and GFF727 are separated by 37 nucleotides GFF727 and GFF728 are separated by 31 nucleotides GFF728 and GFF729 are separated by 16 nucleotides GFF729 and GFF730 are separated by 287 nucleotides
GFF726 - Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) periplasmic (secreted in GramPositives), at 784,352 to 785,749
GFF726
GFF727 - FIG01964566: Predicted membrane protein, hemolysin III homolog, at 785,787 to 786,410
GFF727
GFF728 - putative 2-pyrone-4,6-dicarboxylic acid hydrolase, at 786,442 to 787,290
GFF728
GFF729 - no description, at 787,307 to 787,546
GFF729
GFF730 - Class A beta-lactamase (EC 3.5.2.6), at 787,834 to 788,724
GFF730
Position (kb) 786
787
788 Strain fitness (log2 ratio) -1
0
1
2 at 785.585 kb on + strand, within GFF726 at 785.585 kb on + strand, within GFF726 at 785.585 kb on + strand, within GFF726 at 785.586 kb on - strand, within GFF726 at 785.609 kb on + strand, within GFF726 at 785.610 kb on - strand at 785.624 kb on + strand at 785.624 kb on + strand at 785.624 kb on + strand at 785.625 kb on - strand at 785.625 kb on - strand at 785.648 kb on + strand at 785.648 kb on + strand at 785.658 kb on - strand at 785.658 kb on - strand at 785.726 kb on + strand at 785.726 kb on + strand at 785.727 kb on - strand at 785.727 kb on - strand at 785.790 kb on + strand at 785.943 kb on + strand, within GFF727 at 785.944 kb on - strand, within GFF727 at 786.021 kb on + strand, within GFF727 at 786.021 kb on + strand, within GFF727 at 786.042 kb on + strand, within GFF727 at 786.042 kb on + strand, within GFF727 at 786.042 kb on + strand, within GFF727 at 786.043 kb on - strand, within GFF727 at 786.043 kb on - strand, within GFF727 at 786.043 kb on - strand, within GFF727 at 786.186 kb on + strand, within GFF727 at 786.186 kb on + strand, within GFF727 at 786.187 kb on - strand, within GFF727 at 786.187 kb on - strand, within GFF727 at 786.187 kb on - strand, within GFF727 at 786.188 kb on + strand, within GFF727 at 786.286 kb on - strand, within GFF727 at 786.307 kb on - strand, within GFF727 at 786.381 kb on + strand at 786.382 kb on - strand at 786.382 kb on - strand at 786.532 kb on + strand, within GFF728 at 786.532 kb on + strand, within GFF728 at 786.533 kb on - strand, within GFF728 at 786.569 kb on - strand, within GFF728 at 786.569 kb on - strand, within GFF728 at 786.569 kb on - strand, within GFF728 at 786.802 kb on + strand, within GFF728 at 786.831 kb on + strand, within GFF728 at 786.831 kb on + strand, within GFF728 at 786.832 kb on - strand, within GFF728 at 787.174 kb on + strand, within GFF728 at 787.590 kb on + strand at 787.590 kb on + strand at 787.591 kb on - strand at 787.591 kb on - strand at 787.591 kb on - strand at 787.768 kb on + strand at 787.818 kb on + strand at 787.922 kb on + strand at 787.923 kb on - strand, within GFF730 at 787.977 kb on + strand, within GFF730 at 787.978 kb on - strand, within GFF730 at 787.989 kb on - strand, within GFF730 at 787.989 kb on - strand, within GFF730 at 787.989 kb on - strand, within GFF730
Per-strain Table
Position Strand Gene LocusTag Fraction no phage control remove 785,585 + GFF726 0.88 -1.4 785,585 + GFF726 0.88 -0.0 785,585 + GFF726 0.88 -0.4 785,586 - GFF726 0.88 -0.2 785,609 + GFF726 0.90 -0.5 785,610 - -0.2 785,624 + -0.0 785,624 + -0.1 785,624 + -0.5 785,625 - -0.9 785,625 - -1.1 785,648 + -0.3 785,648 + -0.5 785,658 - +0.4 785,658 - +0.4 785,726 + +0.0 785,726 + -0.2 785,727 - -0.6 785,727 - +0.9 785,790 + +0.2 785,943 + GFF727 0.25 -0.5 785,944 - GFF727 0.25 +0.2 786,021 + GFF727 0.38 +0.1 786,021 + GFF727 0.38 +0.0 786,042 + GFF727 0.41 -0.1 786,042 + GFF727 0.41 -0.5 786,042 + GFF727 0.41 -1.2 786,043 - GFF727 0.41 -0.9 786,043 - GFF727 0.41 -0.3 786,043 - GFF727 0.41 -0.1 786,186 + GFF727 0.64 -1.1 786,186 + GFF727 0.64 -0.6 786,187 - GFF727 0.64 +1.6 786,187 - GFF727 0.64 -0.7 786,187 - GFF727 0.64 +2.0 786,188 + GFF727 0.64 -0.2 786,286 - GFF727 0.80 +0.2 786,307 - GFF727 0.83 +1.0 786,381 + -0.3 786,382 - -1.2 786,382 - -0.2 786,532 + GFF728 0.11 -0.2 786,532 + GFF728 0.11 -1.4 786,533 - GFF728 0.11 +1.1 786,569 - GFF728 0.15 -0.3 786,569 - GFF728 0.15 +1.4 786,569 - GFF728 0.15 -0.3 786,802 + GFF728 0.42 +0.1 786,831 + GFF728 0.46 +0.1 786,831 + GFF728 0.46 -0.6 786,832 - GFF728 0.46 +0.4 787,174 + GFF728 0.86 +0.6 787,590 + -0.4 787,590 + -0.6 787,591 - -1.2 787,591 - +1.8 787,591 - -0.2 787,768 + +0.1 787,818 + -0.1 787,922 + -0.3 787,923 - GFF730 0.10 -0.2 787,977 + GFF730 0.16 -0.2 787,978 - GFF730 0.16 -0.4 787,989 - GFF730 0.17 +0.0 787,989 - GFF730 0.17 -0.6 787,989 - GFF730 0.17 -1.0
Or see this region's nucleotide sequence