Experiment: no phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4839 and GFF4840 are separated by 582 nucleotides GFF4840 and GFF4841 overlap by 4 nucleotides
GFF4839 - Transcriptional regulator PA2737, MerR family, at 209,239 to 209,706
GFF4839
GFF4840 - FIG00956188: hypothetical protein, at 210,289 to 210,534
GFF4840
GFF4841 - Conjugative transfer protein TrbI, at 210,531 to 211,802
GFF4841
Position (kb) 210
211 Strain fitness (log2 ratio) -2
-1
0
1
2 at 209.332 kb on + strand, within GFF4839 at 209.389 kb on + strand, within GFF4839 at 209.389 kb on + strand, within GFF4839 at 209.389 kb on + strand, within GFF4839 at 209.392 kb on + strand, within GFF4839 at 209.392 kb on + strand, within GFF4839 at 209.393 kb on - strand, within GFF4839 at 209.393 kb on - strand, within GFF4839 at 209.440 kb on + strand, within GFF4839 at 209.714 kb on + strand at 209.714 kb on + strand at 209.715 kb on - strand at 209.718 kb on + strand at 209.718 kb on + strand at 209.718 kb on + strand at 209.718 kb on + strand at 209.718 kb on + strand at 209.718 kb on + strand at 209.718 kb on + strand at 209.718 kb on + strand at 209.719 kb on - strand at 209.719 kb on - strand at 209.719 kb on - strand at 209.719 kb on - strand at 209.719 kb on - strand at 209.719 kb on - strand at 209.719 kb on - strand at 209.719 kb on - strand at 209.719 kb on - strand at 209.719 kb on - strand at 209.719 kb on - strand at 209.719 kb on - strand at 209.720 kb on + strand at 209.817 kb on + strand at 209.817 kb on + strand at 209.817 kb on + strand at 209.817 kb on + strand at 209.817 kb on + strand at 209.818 kb on - strand at 209.821 kb on + strand at 209.821 kb on + strand at 209.821 kb on + strand at 209.821 kb on + strand at 209.821 kb on + strand at 209.821 kb on + strand at 209.821 kb on + strand at 209.821 kb on + strand at 209.821 kb on + strand at 209.821 kb on + strand at 209.821 kb on + strand at 209.821 kb on + strand at 209.821 kb on + strand at 209.821 kb on + strand at 209.821 kb on + strand at 209.822 kb on - strand at 209.822 kb on - strand at 209.822 kb on - strand at 209.822 kb on - strand at 209.822 kb on - strand at 209.822 kb on - strand at 209.822 kb on - strand at 209.822 kb on - strand at 209.936 kb on + strand at 209.936 kb on + strand at 209.936 kb on + strand at 209.936 kb on + strand at 209.936 kb on + strand at 209.937 kb on - strand at 209.937 kb on - strand at 209.937 kb on - strand at 209.950 kb on + strand at 209.951 kb on - strand at 209.951 kb on - strand at 209.951 kb on - strand at 209.951 kb on - strand at 210.065 kb on + strand at 210.065 kb on + strand at 210.065 kb on + strand at 210.066 kb on - strand at 210.066 kb on - strand at 210.066 kb on - strand at 210.072 kb on + strand at 210.073 kb on - strand at 210.073 kb on - strand at 210.073 kb on - strand at 210.075 kb on + strand at 210.075 kb on + strand at 210.075 kb on + strand at 210.075 kb on + strand at 210.075 kb on + strand at 210.075 kb on + strand at 210.075 kb on + strand at 210.075 kb on + strand at 210.075 kb on + strand at 210.075 kb on + strand at 210.075 kb on + strand at 210.075 kb on + strand at 210.075 kb on + strand at 210.075 kb on + strand at 210.075 kb on + strand at 210.075 kb on + strand at 210.075 kb on + strand at 210.075 kb on + strand at 210.076 kb on - strand at 210.076 kb on - strand at 210.076 kb on - strand at 210.076 kb on - strand at 210.076 kb on - strand at 210.076 kb on - strand at 210.076 kb on - strand at 210.076 kb on - strand at 210.076 kb on - strand at 210.076 kb on - strand at 210.076 kb on - strand at 210.076 kb on - strand at 210.124 kb on + strand at 210.124 kb on + strand at 210.124 kb on + strand at 210.124 kb on + strand at 210.124 kb on + strand at 210.124 kb on + strand at 210.124 kb on + strand at 210.125 kb on - strand at 210.125 kb on - strand at 210.125 kb on - strand at 210.135 kb on + strand at 210.135 kb on + strand at 210.135 kb on + strand at 210.136 kb on - strand at 210.136 kb on - strand at 210.152 kb on + strand at 210.153 kb on - strand at 210.153 kb on - strand at 210.196 kb on + strand at 210.196 kb on + strand at 210.196 kb on + strand at 210.196 kb on + strand at 210.197 kb on - strand at 210.197 kb on - strand at 210.197 kb on - strand at 210.407 kb on + strand, within GFF4840 at 210.408 kb on - strand, within GFF4840 at 210.408 kb on - strand, within GFF4840 at 210.408 kb on - strand, within GFF4840 at 210.432 kb on - strand, within GFF4840 at 210.568 kb on + strand at 210.568 kb on + strand at 210.847 kb on + strand, within GFF4841 at 210.946 kb on + strand, within GFF4841 at 210.946 kb on + strand, within GFF4841 at 210.947 kb on - strand, within GFF4841 at 210.947 kb on - strand, within GFF4841 at 210.947 kb on - strand, within GFF4841 at 210.947 kb on - strand, within GFF4841 at 210.947 kb on - strand, within GFF4841 at 210.947 kb on - strand, within GFF4841 at 210.964 kb on + strand, within GFF4841 at 210.964 kb on + strand, within GFF4841 at 210.964 kb on + strand, within GFF4841 at 210.964 kb on + strand, within GFF4841 at 210.964 kb on + strand, within GFF4841 at 210.964 kb on + strand, within GFF4841 at 210.964 kb on + strand, within GFF4841 at 210.965 kb on - strand, within GFF4841 at 210.965 kb on - strand, within GFF4841 at 210.965 kb on - strand, within GFF4841 at 210.965 kb on - strand, within GFF4841 at 210.965 kb on - strand, within GFF4841 at 210.965 kb on - strand, within GFF4841 at 211.024 kb on + strand, within GFF4841 at 211.024 kb on + strand, within GFF4841 at 211.024 kb on + strand, within GFF4841 at 211.024 kb on + strand, within GFF4841 at 211.024 kb on + strand, within GFF4841 at 211.025 kb on - strand, within GFF4841 at 211.123 kb on + strand, within GFF4841 at 211.124 kb on - strand, within GFF4841 at 211.435 kb on + strand, within GFF4841 at 211.435 kb on + strand, within GFF4841 at 211.435 kb on + strand, within GFF4841 at 211.436 kb on - strand, within GFF4841 at 211.436 kb on - strand, within GFF4841 at 211.436 kb on - strand, within GFF4841 at 211.436 kb on - strand, within GFF4841 at 211.436 kb on - strand, within GFF4841 at 211.436 kb on - strand, within GFF4841 at 211.436 kb on - strand, within GFF4841 at 211.436 kb on - strand, within GFF4841
Per-strain Table
Position Strand Gene LocusTag Fraction no phage control remove 209,332 + GFF4839 0.20 -1.2 209,389 + GFF4839 0.32 -1.1 209,389 + GFF4839 0.32 -0.4 209,389 + GFF4839 0.32 +0.5 209,392 + GFF4839 0.33 +0.1 209,392 + GFF4839 0.33 -0.9 209,393 - GFF4839 0.33 -0.1 209,393 - GFF4839 0.33 -0.1 209,440 + GFF4839 0.43 -0.1 209,714 + -0.1 209,714 + -0.5 209,715 - -1.4 209,718 + -1.0 209,718 + -1.4 209,718 + -2.2 209,718 + -1.1 209,718 + -0.7 209,718 + -0.4 209,718 + -0.1 209,718 + -0.3 209,719 - +2.2 209,719 - -0.9 209,719 - -0.7 209,719 - -0.9 209,719 - -1.2 209,719 - +0.1 209,719 - -0.7 209,719 - -1.5 209,719 - -0.9 209,719 - -1.1 209,719 - -0.6 209,719 - +0.7 209,720 + -1.1 209,817 + -0.0 209,817 + -1.1 209,817 + -1.6 209,817 + +0.1 209,817 + +1.0 209,818 - -0.9 209,821 + +0.9 209,821 + +1.0 209,821 + -0.8 209,821 + -0.1 209,821 + -0.4 209,821 + -0.5 209,821 + +0.2 209,821 + +0.6 209,821 + +0.3 209,821 + -0.1 209,821 + -0.8 209,821 + +1.1 209,821 + +0.1 209,821 + +0.4 209,821 + -1.0 209,822 - -0.9 209,822 - +0.5 209,822 - +0.2 209,822 - -1.4 209,822 - -0.1 209,822 - +0.7 209,822 - +0.5 209,822 - +0.0 209,936 + +1.5 209,936 + -0.4 209,936 + -0.1 209,936 + +0.3 209,936 + +0.1 209,937 - +0.1 209,937 - +0.2 209,937 - -1.4 209,950 + +0.0 209,951 - -0.4 209,951 - -0.6 209,951 - -0.7 209,951 - +0.4 210,065 + -0.9 210,065 + -0.5 210,065 + -0.2 210,066 - -0.1 210,066 - +0.9 210,066 - -0.3 210,072 + -0.2 210,073 - +0.3 210,073 - +0.5 210,073 - -0.1 210,075 + -1.1 210,075 + -1.5 210,075 + -0.3 210,075 + -1.0 210,075 + -1.2 210,075 + -0.1 210,075 + -2.0 210,075 + -0.6 210,075 + -0.8 210,075 + +1.2 210,075 + -0.4 210,075 + -0.3 210,075 + +0.0 210,075 + -0.7 210,075 + +0.2 210,075 + -0.6 210,075 + +0.6 210,075 + -0.9 210,076 - -0.5 210,076 - -0.7 210,076 - +0.5 210,076 - -0.5 210,076 - -0.3 210,076 - +0.9 210,076 - -0.1 210,076 - -0.3 210,076 - -0.1 210,076 - +1.0 210,076 - -0.4 210,076 - -0.2 210,124 + -0.3 210,124 + -0.7 210,124 + +0.5 210,124 + +0.4 210,124 + -0.3 210,124 + -0.2 210,124 + +0.1 210,125 - +0.3 210,125 - -0.4 210,125 - -0.2 210,135 + -0.9 210,135 + -1.1 210,135 + -0.1 210,136 - +0.2 210,136 - +1.5 210,152 + -0.2 210,153 - +1.5 210,153 - -0.5 210,196 + +0.1 210,196 + +0.5 210,196 + -0.2 210,196 + -0.8 210,197 - +0.3 210,197 - -0.8 210,197 - -0.9 210,407 + GFF4840 0.48 -0.1 210,408 - GFF4840 0.48 -0.2 210,408 - GFF4840 0.48 -1.7 210,408 - GFF4840 0.48 +0.0 210,432 - GFF4840 0.58 +0.7 210,568 + -1.1 210,568 + -1.0 210,847 + GFF4841 0.25 +0.6 210,946 + GFF4841 0.33 +0.3 210,946 + GFF4841 0.33 -0.8 210,947 - GFF4841 0.33 -0.3 210,947 - GFF4841 0.33 -0.5 210,947 - GFF4841 0.33 +0.4 210,947 - GFF4841 0.33 -0.7 210,947 - GFF4841 0.33 +1.2 210,947 - GFF4841 0.33 +0.2 210,964 + GFF4841 0.34 -0.3 210,964 + GFF4841 0.34 +0.1 210,964 + GFF4841 0.34 +1.1 210,964 + GFF4841 0.34 -0.2 210,964 + GFF4841 0.34 -0.1 210,964 + GFF4841 0.34 -0.5 210,964 + GFF4841 0.34 -1.5 210,965 - GFF4841 0.34 +0.3 210,965 - GFF4841 0.34 -0.5 210,965 - GFF4841 0.34 -0.6 210,965 - GFF4841 0.34 -0.2 210,965 - GFF4841 0.34 +0.1 210,965 - GFF4841 0.34 -0.0 211,024 + GFF4841 0.39 -0.0 211,024 + GFF4841 0.39 +0.2 211,024 + GFF4841 0.39 +0.1 211,024 + GFF4841 0.39 -0.3 211,024 + GFF4841 0.39 +1.9 211,025 - GFF4841 0.39 +0.1 211,123 + GFF4841 0.47 +0.8 211,124 - GFF4841 0.47 -0.1 211,435 + GFF4841 0.71 +1.5 211,435 + GFF4841 0.71 -0.4 211,435 + GFF4841 0.71 -0.4 211,436 - GFF4841 0.71 -0.5 211,436 - GFF4841 0.71 +0.9 211,436 - GFF4841 0.71 +0.6 211,436 - GFF4841 0.71 -0.1 211,436 - GFF4841 0.71 +0.6 211,436 - GFF4841 0.71 +1.3 211,436 - GFF4841 0.71 -0.2 211,436 - GFF4841 0.71 -0.1
Or see this region's nucleotide sequence