Experiment: no phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4610 and GFF4611 are separated by 70 nucleotides GFF4611 and GFF4612 are separated by 140 nucleotides
GFF4610 - Long chain acyl-CoA dehydrogenase [fadN-fadA-fadE operon] (EC 1.3.8.8), at 251,958 to 253,754
GFF4610
GFF4611 - Predicted transcriptional regulator for fatty acid degradation FadP, TetR family, at 253,825 to 254,523
GFF4611
GFF4612 - Short-chain dehydrogenase/reductase SDR, at 254,664 to 255,422
GFF4612
Position (kb) 253
254
255 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 253.183 kb on + strand, within GFF4610 at 253.184 kb on - strand, within GFF4610 at 253.184 kb on - strand, within GFF4610 at 253.184 kb on - strand, within GFF4610 at 253.300 kb on + strand, within GFF4610 at 253.300 kb on + strand, within GFF4610 at 253.300 kb on + strand, within GFF4610 at 253.300 kb on + strand, within GFF4610 at 253.300 kb on + strand, within GFF4610 at 253.346 kb on - strand, within GFF4610 at 253.346 kb on - strand, within GFF4610 at 253.369 kb on + strand, within GFF4610 at 253.370 kb on - strand, within GFF4610 at 253.492 kb on + strand, within GFF4610 at 253.492 kb on + strand, within GFF4610 at 253.493 kb on - strand, within GFF4610 at 253.501 kb on + strand, within GFF4610 at 253.501 kb on + strand, within GFF4610 at 253.502 kb on - strand, within GFF4610 at 253.502 kb on - strand, within GFF4610 at 253.744 kb on + strand at 253.744 kb on + strand at 253.744 kb on + strand at 253.744 kb on + strand at 253.744 kb on + strand at 253.744 kb on + strand at 253.745 kb on - strand at 253.745 kb on - strand at 253.745 kb on - strand at 253.745 kb on - strand at 253.745 kb on - strand at 253.745 kb on - strand at 253.745 kb on - strand at 253.749 kb on - strand at 253.749 kb on - strand at 253.749 kb on - strand at 253.749 kb on - strand at 253.777 kb on + strand at 253.777 kb on + strand at 253.778 kb on - strand at 253.781 kb on + strand at 253.982 kb on + strand, within GFF4611 at 253.983 kb on - strand, within GFF4611 at 254.174 kb on + strand, within GFF4611 at 254.174 kb on + strand, within GFF4611 at 254.174 kb on + strand, within GFF4611 at 254.174 kb on + strand, within GFF4611 at 254.174 kb on + strand, within GFF4611 at 254.175 kb on - strand, within GFF4611 at 254.175 kb on - strand, within GFF4611 at 254.175 kb on - strand, within GFF4611 at 254.175 kb on - strand, within GFF4611 at 254.175 kb on - strand, within GFF4611 at 254.175 kb on - strand, within GFF4611 at 254.175 kb on - strand, within GFF4611 at 254.175 kb on - strand, within GFF4611 at 254.175 kb on - strand, within GFF4611 at 254.175 kb on - strand, within GFF4611 at 254.303 kb on + strand, within GFF4611 at 254.304 kb on - strand, within GFF4611 at 254.304 kb on - strand, within GFF4611 at 254.304 kb on - strand, within GFF4611 at 254.782 kb on + strand, within GFF4612 at 254.783 kb on - strand, within GFF4612 at 254.929 kb on + strand, within GFF4612 at 254.929 kb on + strand, within GFF4612 at 254.930 kb on - strand, within GFF4612 at 254.930 kb on - strand, within GFF4612 at 254.944 kb on + strand, within GFF4612 at 254.944 kb on + strand, within GFF4612 at 254.945 kb on - strand, within GFF4612 at 255.052 kb on + strand, within GFF4612 at 255.052 kb on + strand, within GFF4612 at 255.053 kb on - strand, within GFF4612 at 255.053 kb on - strand, within GFF4612 at 255.053 kb on - strand, within GFF4612
Per-strain Table
Position Strand Gene LocusTag Fraction no phage control remove 253,183 + GFF4610 0.68 +0.8 253,184 - GFF4610 0.68 -1.0 253,184 - GFF4610 0.68 +0.3 253,184 - GFF4610 0.68 -0.4 253,300 + GFF4610 0.75 -1.0 253,300 + GFF4610 0.75 -0.7 253,300 + GFF4610 0.75 -0.4 253,300 + GFF4610 0.75 -0.8 253,300 + GFF4610 0.75 -0.6 253,346 - GFF4610 0.77 -0.0 253,346 - GFF4610 0.77 -0.1 253,369 + GFF4610 0.79 +0.2 253,370 - GFF4610 0.79 +0.1 253,492 + GFF4610 0.85 -0.2 253,492 + GFF4610 0.85 -0.3 253,493 - GFF4610 0.85 -0.2 253,501 + GFF4610 0.86 -1.3 253,501 + GFF4610 0.86 +0.8 253,502 - GFF4610 0.86 -1.3 253,502 - GFF4610 0.86 +0.9 253,744 + -1.4 253,744 + +0.2 253,744 + -0.6 253,744 + +0.1 253,744 + -0.3 253,744 + -0.7 253,745 - -0.7 253,745 - -0.0 253,745 - -0.0 253,745 - -0.3 253,745 - -1.1 253,745 - -1.1 253,745 - +1.2 253,749 - -1.3 253,749 - -0.7 253,749 - -1.0 253,749 - -0.3 253,777 + +0.3 253,777 + +0.6 253,778 - +0.2 253,781 + +2.1 253,982 + GFF4611 0.22 -2.9 253,983 - GFF4611 0.23 +0.8 254,174 + GFF4611 0.50 -1.7 254,174 + GFF4611 0.50 -1.4 254,174 + GFF4611 0.50 -0.2 254,174 + GFF4611 0.50 +0.2 254,174 + GFF4611 0.50 +0.4 254,175 - GFF4611 0.50 -0.9 254,175 - GFF4611 0.50 -0.1 254,175 - GFF4611 0.50 -0.1 254,175 - GFF4611 0.50 -1.2 254,175 - GFF4611 0.50 -1.0 254,175 - GFF4611 0.50 -1.2 254,175 - GFF4611 0.50 +0.2 254,175 - GFF4611 0.50 -0.9 254,175 - GFF4611 0.50 -1.7 254,175 - GFF4611 0.50 +0.9 254,303 + GFF4611 0.68 -0.4 254,304 - GFF4611 0.69 -0.5 254,304 - GFF4611 0.69 -0.4 254,304 - GFF4611 0.69 -0.4 254,782 + GFF4612 0.16 -0.7 254,783 - GFF4612 0.16 -0.8 254,929 + GFF4612 0.35 -0.1 254,929 + GFF4612 0.35 -0.8 254,930 - GFF4612 0.35 -0.6 254,930 - GFF4612 0.35 -0.4 254,944 + GFF4612 0.37 -0.6 254,944 + GFF4612 0.37 -0.6 254,945 - GFF4612 0.37 -0.2 255,052 + GFF4612 0.51 +0.2 255,052 + GFF4612 0.51 +0.8 255,053 - GFF4612 0.51 -0.6 255,053 - GFF4612 0.51 -1.1 255,053 - GFF4612 0.51 -0.4
Or see this region's nucleotide sequence