Experiment: no phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3443 and GFF3444 overlap by 1 nucleotides GFF3444 and GFF3445 are separated by 64 nucleotides GFF3445 and GFF3446 are separated by 24 nucleotides
GFF3443 - hypothetical protein, at 265,585 to 267,348
GFF3443
GFF3444 - BUG/TctC family periplasmic protein, at 267,348 to 268,337
GFF3444
GFF3445 - Cupin 2, conserved barrel, at 268,402 to 268,761
GFF3445
GFF3446 - Quinone oxidoreductase (EC 1.6.5.5), at 268,786 to 269,793
GFF3446
Position (kb) 267
268
269 Strain fitness (log2 ratio) -2
-1
0
1 at 266.436 kb on - strand, within GFF3443 at 266.436 kb on - strand, within GFF3443 at 266.594 kb on + strand, within GFF3443 at 266.594 kb on + strand, within GFF3443 at 266.594 kb on + strand, within GFF3443 at 266.595 kb on - strand, within GFF3443 at 266.595 kb on - strand, within GFF3443 at 266.595 kb on - strand, within GFF3443 at 266.743 kb on + strand, within GFF3443 at 266.743 kb on + strand, within GFF3443 at 266.756 kb on + strand, within GFF3443 at 266.756 kb on + strand, within GFF3443 at 266.771 kb on + strand, within GFF3443 at 266.771 kb on + strand, within GFF3443 at 266.771 kb on + strand, within GFF3443 at 266.771 kb on + strand, within GFF3443 at 266.772 kb on - strand, within GFF3443 at 266.772 kb on - strand, within GFF3443 at 266.772 kb on - strand, within GFF3443 at 266.772 kb on - strand, within GFF3443 at 266.963 kb on + strand, within GFF3443 at 267.577 kb on + strand, within GFF3444 at 267.577 kb on + strand, within GFF3444 at 267.578 kb on - strand, within GFF3444 at 267.578 kb on - strand, within GFF3444 at 267.856 kb on + strand, within GFF3444 at 267.856 kb on + strand, within GFF3444 at 267.856 kb on + strand, within GFF3444 at 267.857 kb on - strand, within GFF3444 at 267.857 kb on - strand, within GFF3444 at 267.992 kb on - strand, within GFF3444 at 268.007 kb on - strand, within GFF3444 at 268.054 kb on + strand, within GFF3444 at 268.508 kb on + strand, within GFF3445 at 268.584 kb on - strand, within GFF3445 at 269.091 kb on - strand, within GFF3446 at 269.091 kb on - strand, within GFF3446 at 269.111 kb on + strand, within GFF3446 at 269.139 kb on + strand, within GFF3446
Per-strain Table
Position Strand Gene LocusTag Fraction no phage control remove 266,436 - GFF3443 0.48 +0.9 266,436 - GFF3443 0.48 -0.5 266,594 + GFF3443 0.57 +0.3 266,594 + GFF3443 0.57 +0.3 266,594 + GFF3443 0.57 -1.3 266,595 - GFF3443 0.57 -0.7 266,595 - GFF3443 0.57 -1.6 266,595 - GFF3443 0.57 -0.6 266,743 + GFF3443 0.66 -0.7 266,743 + GFF3443 0.66 -0.5 266,756 + GFF3443 0.66 +0.3 266,756 + GFF3443 0.66 +0.7 266,771 + GFF3443 0.67 -1.6 266,771 + GFF3443 0.67 +0.6 266,771 + GFF3443 0.67 +1.0 266,771 + GFF3443 0.67 +0.2 266,772 - GFF3443 0.67 -0.5 266,772 - GFF3443 0.67 -0.0 266,772 - GFF3443 0.67 -0.1 266,772 - GFF3443 0.67 +1.1 266,963 + GFF3443 0.78 -0.5 267,577 + GFF3444 0.23 -2.1 267,577 + GFF3444 0.23 -0.4 267,578 - GFF3444 0.23 -0.2 267,578 - GFF3444 0.23 +0.4 267,856 + GFF3444 0.51 +1.5 267,856 + GFF3444 0.51 -0.2 267,856 + GFF3444 0.51 +0.8 267,857 - GFF3444 0.51 +0.1 267,857 - GFF3444 0.51 +1.0 267,992 - GFF3444 0.65 -0.3 268,007 - GFF3444 0.67 +0.4 268,054 + GFF3444 0.71 -0.0 268,508 + GFF3445 0.29 -0.2 268,584 - GFF3445 0.51 -0.4 269,091 - GFF3446 0.30 +0.1 269,091 - GFF3446 0.30 +0.3 269,111 + GFF3446 0.32 -0.2 269,139 + GFF3446 0.35 -0.3
Or see this region's nucleotide sequence