Experiment: no phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2747 and GFF2748 are separated by 183 nucleotides GFF2748 and GFF2749 are separated by 2 nucleotides GFF2749 and GFF2750 overlap by 1 nucleotides
GFF2747 - 17 kDa surface antigen, at 181,076 to 181,576
GFF2747
GFF2748 - Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23), at 181,760 to 182,206
GFF2748
GFF2749 - hypothetical protein, at 182,209 to 182,685
GFF2749
GFF2750 - Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5), at 182,685 to 183,908
GFF2750
Position (kb) 182
183 Strain fitness (log2 ratio) -1
0
1 at 181.343 kb on + strand, within GFF2747 at 181.344 kb on - strand, within GFF2747 at 181.417 kb on - strand, within GFF2747 at 181.425 kb on + strand, within GFF2747 at 181.425 kb on + strand, within GFF2747 at 181.426 kb on - strand, within GFF2747 at 181.426 kb on - strand, within GFF2747 at 181.440 kb on + strand, within GFF2747 at 181.489 kb on - strand, within GFF2747 at 181.725 kb on - strand at 182.210 kb on + strand at 182.211 kb on - strand at 182.211 kb on - strand at 182.211 kb on - strand at 182.211 kb on - strand at 182.211 kb on - strand at 182.633 kb on + strand, within GFF2749 at 182.633 kb on + strand, within GFF2749 at 182.633 kb on + strand, within GFF2749 at 182.633 kb on + strand, within GFF2749 at 182.633 kb on + strand, within GFF2749 at 182.633 kb on + strand, within GFF2749 at 182.634 kb on - strand, within GFF2749 at 182.634 kb on - strand, within GFF2749 at 182.634 kb on - strand, within GFF2749 at 182.634 kb on - strand, within GFF2749 at 182.634 kb on - strand, within GFF2749 at 182.634 kb on - strand, within GFF2749 at 182.634 kb on - strand, within GFF2749 at 182.634 kb on - strand, within GFF2749 at 182.634 kb on - strand, within GFF2749 at 182.634 kb on - strand, within GFF2749 at 182.634 kb on - strand, within GFF2749 at 182.702 kb on + strand at 182.702 kb on + strand at 182.703 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction no phage control remove 181,343 + GFF2747 0.53 -0.8 181,344 - GFF2747 0.53 -0.4 181,417 - GFF2747 0.68 -1.2 181,425 + GFF2747 0.70 -0.2 181,425 + GFF2747 0.70 -0.3 181,426 - GFF2747 0.70 +0.8 181,426 - GFF2747 0.70 -0.4 181,440 + GFF2747 0.73 -0.1 181,489 - GFF2747 0.82 -0.9 181,725 - -0.1 182,210 + +1.0 182,211 - -0.2 182,211 - +0.0 182,211 - +0.4 182,211 - +1.4 182,211 - +0.3 182,633 + GFF2749 0.89 +0.4 182,633 + GFF2749 0.89 -1.6 182,633 + GFF2749 0.89 +0.3 182,633 + GFF2749 0.89 -1.2 182,633 + GFF2749 0.89 +0.6 182,633 + GFF2749 0.89 +1.6 182,634 - GFF2749 0.89 +0.3 182,634 - GFF2749 0.89 -0.4 182,634 - GFF2749 0.89 +0.5 182,634 - GFF2749 0.89 +1.6 182,634 - GFF2749 0.89 -0.5 182,634 - GFF2749 0.89 -0.0 182,634 - GFF2749 0.89 -0.6 182,634 - GFF2749 0.89 +0.7 182,634 - GFF2749 0.89 -0.3 182,634 - GFF2749 0.89 +0.2 182,634 - GFF2749 0.89 -0.2 182,702 + +0.0 182,702 + -0.3 182,703 - -1.0
Or see this region's nucleotide sequence