Strain Fitness in Variovorax sp. SCN45 around GFF2063

Experiment: no phage control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	no phage control
109,614	+		GFF2061	0.86	-0.0
109,755	+				+0.0
109,755	+				+0.0
109,755	+				-1.1
109,756	-				+1.8
109,801	+				-0.4
109,801	+				-0.0
109,801	+				+1.3
109,801	+				-0.1
109,802	-				-1.9
109,802	-				-0.1
109,802	-				-0.6
109,802	-				-0.6
109,802	-				+0.2
109,802	-				-0.4
109,843	+				-1.5
109,843	+				+0.2
109,843	+				-1.6
109,843	+				-0.4
109,843	+				-1.1
110,297	+				+0.4
110,297	+				-0.6
110,297	+				-0.1
110,297	+				-0.6
110,297	+				-0.2
110,297	+				-0.5
110,297	+				-0.5
110,297	+				+0.2
110,297	+				+0.6
110,298	-				+0.3
110,298	-				+0.0
110,298	-				+0.3
110,472	+		GFF2063	0.12	+0.9
110,472	+		GFF2063	0.12	-0.1
110,472	+		GFF2063	0.12	-0.6
110,472	+		GFF2063	0.12	+0.2
110,746	+		GFF2063	0.31	-0.8
110,746	+		GFF2063	0.31	-0.8
110,746	+		GFF2063	0.31	+0.2
110,746	+		GFF2063	0.31	-0.5
110,746	+		GFF2063	0.31	-0.9
110,746	+		GFF2063	0.31	+0.1
110,746	+		GFF2063	0.31	-0.7
110,746	+		GFF2063	0.31	-0.2
110,747	-		GFF2063	0.32	-1.7
110,747	-		GFF2063	0.32	+0.1
110,747	-		GFF2063	0.32	-0.2
110,747	-		GFF2063	0.32	+0.2
110,790	+		GFF2063	0.35	-0.2
110,790	+		GFF2063	0.35	+0.4
110,790	+		GFF2063	0.35	-1.0
110,790	+		GFF2063	0.35	-0.1
110,790	+		GFF2063	0.35	-0.5
110,790	+		GFF2063	0.35	+1.3
110,791	-		GFF2063	0.35	-0.7
110,791	-		GFF2063	0.35	+0.6
110,791	-		GFF2063	0.35	-0.4
110,791	-		GFF2063	0.35	+0.3
110,791	-		GFF2063	0.35	+1.3
110,791	-		GFF2063	0.35	-0.4
110,791	-		GFF2063	0.35	-0.8
110,791	-		GFF2063	0.35	-0.5
110,791	-		GFF2063	0.35	-1.1
110,862	+		GFF2063	0.40	+0.6
110,862	+		GFF2063	0.40	+0.2
110,862	+		GFF2063	0.40	+0.3
110,862	+		GFF2063	0.40	+0.1
110,862	+		GFF2063	0.40	+0.2
110,862	+		GFF2063	0.40	-0.3
110,862	+		GFF2063	0.40	+0.0
110,862	+		GFF2063	0.40	+0.9
110,862	+		GFF2063	0.40	-0.2
110,862	+		GFF2063	0.40	-0.2
110,862	+		GFF2063	0.40	-1.0
110,862	+		GFF2063	0.40	+0.1
110,862	+		GFF2063	0.40	-0.2
110,862	+		GFF2063	0.40	-0.0
110,862	+		GFF2063	0.40	-0.2
110,862	+		GFF2063	0.40	-0.3
110,862	+		GFF2063	0.40	-1.2
110,862	+		GFF2063	0.40	-0.5
110,863	-		GFF2063	0.40	-0.5
110,863	-		GFF2063	0.40	-0.1
110,863	-		GFF2063	0.40	+0.4
110,863	-		GFF2063	0.40	-0.2
110,863	-		GFF2063	0.40	-1.1
110,863	-		GFF2063	0.40	-0.4
110,863	-		GFF2063	0.40	+0.1
110,863	-		GFF2063	0.40	-0.5
110,863	-		GFF2063	0.40	-1.9
110,863	-		GFF2063	0.40	-0.1
110,863	-		GFF2063	0.40	-0.8
110,863	-		GFF2063	0.40	+1.5
110,863	-		GFF2063	0.40	-0.3
110,863	-		GFF2063	0.40	+0.2
110,863	-		GFF2063	0.40	+0.5
110,863	-		GFF2063	0.40	+1.8
110,863	-		GFF2063	0.40	+1.0
110,863	-		GFF2063	0.40	+0.5
110,863	-		GFF2063	0.40	-1.0
110,863	-		GFF2063	0.40	-0.3
110,863	-		GFF2063	0.40	-0.8
110,863	-		GFF2063	0.40	-0.2
110,863	-		GFF2063	0.40	+0.3
110,863	-		GFF2063	0.40	+0.6
110,863	-		GFF2063	0.40	-1.9
110,942	+		GFF2063	0.45	-1.7
110,942	+		GFF2063	0.45	+0.2
110,942	+		GFF2063	0.45	-0.2
110,942	+		GFF2063	0.45	+1.3
110,942	+		GFF2063	0.45	+0.2
110,942	+		GFF2063	0.45	-0.3
110,942	+		GFF2063	0.45	-0.2
110,942	+		GFF2063	0.45	+0.5
110,943	-		GFF2063	0.45	-0.4
110,943	-		GFF2063	0.45	-0.0
110,943	-		GFF2063	0.45	+0.8
111,027	+		GFF2063	0.51	-0.6
111,027	+		GFF2063	0.51	-0.1
111,028	-		GFF2063	0.51	-0.1
111,186	+		GFF2063	0.62	-1.0
111,187	-		GFF2063	0.62	-0.2
111,187	-		GFF2063	0.62	-0.6
111,187	-		GFF2063	0.62	+0.1
111,552	+		GFF2063	0.88	+0.6
111,552	+		GFF2063	0.88	+0.6
111,552	+		GFF2063	0.88	+0.9
111,552	+		GFF2063	0.88	-0.4
111,552	+		GFF2063	0.88	-1.5
111,553	-		GFF2063	0.88	+0.2
111,553	-		GFF2063	0.88	-0.6
111,553	-		GFF2063	0.88	-1.0
111,553	-		GFF2063	0.88	+1.8
111,553	-		GFF2063	0.88	-0.4
111,553	-		GFF2063	0.88	-0.2
111,553	-		GFF2063	0.88	-2.0
111,706	+				-0.2
111,707	-				-0.2
111,707	-				-0.1
111,746	+				-0.8
111,746	+				-0.2
111,746	+				+0.4
111,746	+				+0.1
111,746	+				-0.2
111,746	+				+1.0
111,746	+				+0.3
111,746	+				-0.8
111,746	+				+0.2
111,746	+				-0.0
111,746	+				-1.2
111,747	-				-0.0
111,747	-				-1.2
111,747	-				-0.1
111,747	-				+0.0
111,747	-				-0.4
111,747	-				+0.1
111,747	-				-0.2
111,747	-				-0.4
111,747	-				-0.8
112,145	+		GFF2064	0.36	-0.2
112,145	+		GFF2064	0.36	-0.2
112,145	+		GFF2064	0.36	+0.3
112,145	+		GFF2064	0.36	+0.8
112,145	+		GFF2064	0.36	-0.2
112,145	+		GFF2064	0.36	+0.1
112,145	+		GFF2064	0.36	-0.5
112,145	+		GFF2064	0.36	+0.5
112,145	+		GFF2064	0.36	+0.2
112,145	+		GFF2064	0.36	+0.5
112,145	+		GFF2064	0.36	+1.2
112,145	+		GFF2064	0.36	-0.5
112,146	-		GFF2064	0.36	-0.5
112,146	-		GFF2064	0.36	-1.5
112,146	-		GFF2064	0.36	-0.7
112,146	-		GFF2064	0.36	-0.4
112,146	-		GFF2064	0.36	+0.4
112,146	-		GFF2064	0.36	-1.0
112,146	-		GFF2064	0.36	+0.2
112,146	-		GFF2064	0.36	-0.8
112,146	-		GFF2064	0.36	-0.4
112,146	-		GFF2064	0.36	+1.2
112,146	-		GFF2064	0.36	-0.2
112,523	+		GFF2064	0.70	+0.1
112,524	-		GFF2064	0.70	-0.6
112,524	-		GFF2064	0.70	-0.4
112,524	-		GFF2064	0.70	-1.2
112,643	+		GFF2064	0.81	+0.7
112,643	+		GFF2064	0.81	+0.2
112,643	+		GFF2064	0.81	+0.2
112,643	+		GFF2064	0.81	-0.1
112,643	+		GFF2064	0.81	-0.8
112,643	+		GFF2064	0.81	-0.6
112,643	+		GFF2064	0.81	+0.2
112,644	-		GFF2064	0.81	-0.6
112,644	-		GFF2064	0.81	-0.5
112,644	-		GFF2064	0.81	-0.4
112,644	-		GFF2064	0.81	+0.4
112,644	-		GFF2064	0.81	-0.4
112,644	-		GFF2064	0.81	-0.1