Experiment: no phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1877 and GFF1878 are separated by 33 nucleotides GFF1878 and GFF1879 are separated by 31 nucleotides GFF1879 and GFF1880 are separated by 279 nucleotides
GFF1877 - ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines), at 550,497 to 551,279
GFF1877
GFF1878 - Bll6165 protein, at 551,313 to 551,723
GFF1878
GFF1879 - dicarboxylic acid transporter PcaT, at 551,755 to 553,101
GFF1879
GFF1880 - Previously called glutamate synthase [NADPH] small chain, at 553,381 to 555,180
GFF1880
Position (kb) 551
552
553
554 Strain fitness (log2 ratio) -2
-1
0
1
2 at 550.951 kb on - strand, within GFF1877 at 551.287 kb on + strand at 551.287 kb on + strand at 551.295 kb on - strand at 551.539 kb on - strand, within GFF1878 at 551.550 kb on + strand, within GFF1878 at 551.550 kb on + strand, within GFF1878 at 551.551 kb on - strand, within GFF1878 at 551.756 kb on + strand at 551.756 kb on + strand at 551.756 kb on + strand at 551.757 kb on - strand at 551.757 kb on - strand at 551.757 kb on - strand at 551.757 kb on - strand at 551.757 kb on - strand at 551.774 kb on + strand at 551.775 kb on - strand at 551.775 kb on - strand at 551.775 kb on - strand at 551.775 kb on - strand at 551.837 kb on + strand at 551.837 kb on + strand at 551.837 kb on + strand at 551.838 kb on - strand at 551.838 kb on - strand at 551.838 kb on - strand at 551.843 kb on + strand at 551.843 kb on + strand at 551.844 kb on - strand at 551.844 kb on - strand at 551.844 kb on - strand at 551.844 kb on - strand at 551.844 kb on - strand at 551.844 kb on - strand at 551.849 kb on + strand at 551.849 kb on + strand at 551.850 kb on - strand at 551.850 kb on - strand at 551.850 kb on - strand at 551.850 kb on - strand at 551.889 kb on - strand at 551.889 kb on - strand at 552.002 kb on + strand, within GFF1879 at 552.002 kb on + strand, within GFF1879 at 552.185 kb on + strand, within GFF1879 at 552.185 kb on + strand, within GFF1879 at 552.185 kb on + strand, within GFF1879 at 552.185 kb on + strand, within GFF1879 at 552.185 kb on + strand, within GFF1879 at 552.185 kb on + strand, within GFF1879 at 552.185 kb on + strand, within GFF1879 at 552.185 kb on + strand, within GFF1879 at 552.185 kb on + strand, within GFF1879 at 552.185 kb on + strand, within GFF1879 at 552.185 kb on + strand, within GFF1879 at 552.186 kb on - strand, within GFF1879 at 552.186 kb on - strand, within GFF1879 at 552.186 kb on - strand, within GFF1879 at 552.186 kb on - strand, within GFF1879 at 552.186 kb on - strand, within GFF1879 at 552.186 kb on - strand, within GFF1879 at 552.186 kb on - strand, within GFF1879 at 552.186 kb on - strand, within GFF1879 at 552.186 kb on - strand, within GFF1879 at 552.186 kb on - strand, within GFF1879 at 552.186 kb on - strand, within GFF1879 at 552.186 kb on - strand, within GFF1879 at 552.186 kb on - strand, within GFF1879 at 552.267 kb on - strand, within GFF1879 at 552.267 kb on - strand, within GFF1879 at 552.267 kb on - strand, within GFF1879 at 552.267 kb on - strand, within GFF1879 at 552.267 kb on - strand, within GFF1879 at 552.267 kb on - strand, within GFF1879 at 552.267 kb on - strand, within GFF1879 at 552.267 kb on - strand, within GFF1879 at 552.308 kb on + strand, within GFF1879 at 552.566 kb on + strand, within GFF1879 at 552.620 kb on + strand, within GFF1879 at 552.620 kb on + strand, within GFF1879 at 552.620 kb on + strand, within GFF1879 at 552.620 kb on + strand, within GFF1879 at 552.620 kb on + strand, within GFF1879 at 552.620 kb on + strand, within GFF1879 at 552.620 kb on + strand, within GFF1879 at 552.621 kb on - strand, within GFF1879 at 552.621 kb on - strand, within GFF1879 at 552.621 kb on - strand, within GFF1879 at 552.621 kb on - strand, within GFF1879 at 552.621 kb on - strand, within GFF1879 at 552.717 kb on - strand, within GFF1879 at 552.717 kb on - strand, within GFF1879 at 552.923 kb on + strand, within GFF1879 at 552.923 kb on + strand, within GFF1879 at 552.923 kb on + strand, within GFF1879 at 552.923 kb on + strand, within GFF1879 at 552.924 kb on - strand, within GFF1879 at 552.924 kb on - strand, within GFF1879 at 552.941 kb on + strand, within GFF1879 at 552.947 kb on + strand, within GFF1879 at 552.948 kb on - strand, within GFF1879 at 552.948 kb on - strand, within GFF1879 at 552.948 kb on - strand, within GFF1879 at 552.948 kb on - strand, within GFF1879 at 553.028 kb on + strand at 553.028 kb on + strand at 553.029 kb on - strand at 553.029 kb on - strand at 553.029 kb on - strand at 553.029 kb on - strand at 553.029 kb on - strand at 553.214 kb on + strand at 553.214 kb on + strand at 553.214 kb on + strand at 553.214 kb on + strand at 553.214 kb on + strand at 553.214 kb on + strand at 553.214 kb on + strand at 553.214 kb on + strand at 553.214 kb on + strand at 553.214 kb on + strand at 553.214 kb on + strand at 553.214 kb on + strand at 553.215 kb on - strand at 553.215 kb on - strand at 553.215 kb on - strand at 553.215 kb on - strand at 553.215 kb on - strand at 553.215 kb on - strand at 553.215 kb on - strand at 553.225 kb on - strand at 553.242 kb on + strand at 553.242 kb on + strand at 553.243 kb on - strand at 553.318 kb on + strand at 553.319 kb on - strand at 553.319 kb on - strand at 553.375 kb on + strand at 553.375 kb on + strand at 553.375 kb on + strand at 553.375 kb on + strand at 553.376 kb on - strand at 553.376 kb on - strand at 553.411 kb on + strand at 553.412 kb on - strand at 553.412 kb on - strand at 553.439 kb on - strand at 553.471 kb on + strand at 553.471 kb on + strand at 553.472 kb on - strand at 553.472 kb on - strand at 553.475 kb on + strand at 553.475 kb on + strand at 553.475 kb on + strand at 553.475 kb on + strand at 553.475 kb on + strand at 553.475 kb on + strand at 553.475 kb on + strand at 553.475 kb on + strand at 553.475 kb on + strand at 553.475 kb on + strand at 553.475 kb on + strand at 553.476 kb on - strand at 553.476 kb on - strand at 553.476 kb on - strand at 553.476 kb on - strand at 553.476 kb on - strand at 553.476 kb on - strand at 553.476 kb on - strand at 553.476 kb on - strand at 553.498 kb on + strand at 553.510 kb on + strand at 553.510 kb on + strand at 553.511 kb on - strand at 553.511 kb on - strand at 553.511 kb on - strand at 553.511 kb on - strand at 553.511 kb on - strand at 553.511 kb on - strand at 553.511 kb on - strand at 553.511 kb on - strand at 553.511 kb on - strand at 553.511 kb on - strand at 553.894 kb on + strand, within GFF1880 at 553.894 kb on + strand, within GFF1880 at 553.894 kb on + strand, within GFF1880 at 553.894 kb on + strand, within GFF1880 at 553.895 kb on - strand, within GFF1880 at 553.895 kb on - strand, within GFF1880
Per-strain Table
Position Strand Gene LocusTag Fraction no phage control remove 550,951 - GFF1877 0.58 +1.5 551,287 + -0.0 551,287 + +0.4 551,295 - -1.7 551,539 - GFF1878 0.55 -0.8 551,550 + GFF1878 0.58 -0.3 551,550 + GFF1878 0.58 -0.4 551,551 - GFF1878 0.58 -0.6 551,756 + -1.4 551,756 + -2.3 551,756 + -0.2 551,757 - -0.1 551,757 - -0.3 551,757 - -1.9 551,757 - -0.3 551,757 - -0.8 551,774 + -0.2 551,775 - -1.1 551,775 - +0.7 551,775 - -0.9 551,775 - -0.1 551,837 + +0.3 551,837 + +0.1 551,837 + -0.2 551,838 - -2.0 551,838 - -0.0 551,838 - -0.6 551,843 + -0.4 551,843 + +0.4 551,844 - +0.3 551,844 - +0.2 551,844 - -0.4 551,844 - -0.3 551,844 - +0.7 551,844 - -1.4 551,849 + -0.7 551,849 + -0.4 551,850 - +0.9 551,850 - -0.6 551,850 - -0.5 551,850 - -0.3 551,889 - +0.4 551,889 - -0.4 552,002 + GFF1879 0.18 -1.2 552,002 + GFF1879 0.18 -0.6 552,185 + GFF1879 0.32 +0.6 552,185 + GFF1879 0.32 +0.1 552,185 + GFF1879 0.32 -0.0 552,185 + GFF1879 0.32 -0.9 552,185 + GFF1879 0.32 -1.4 552,185 + GFF1879 0.32 +0.7 552,185 + GFF1879 0.32 -0.9 552,185 + GFF1879 0.32 -0.6 552,185 + GFF1879 0.32 -0.4 552,185 + GFF1879 0.32 -0.9 552,185 + GFF1879 0.32 -0.5 552,186 - GFF1879 0.32 -1.9 552,186 - GFF1879 0.32 +0.6 552,186 - GFF1879 0.32 +0.5 552,186 - GFF1879 0.32 -0.7 552,186 - GFF1879 0.32 -0.6 552,186 - GFF1879 0.32 +2.0 552,186 - GFF1879 0.32 -0.7 552,186 - GFF1879 0.32 +0.3 552,186 - GFF1879 0.32 -0.0 552,186 - GFF1879 0.32 +0.6 552,186 - GFF1879 0.32 -0.5 552,186 - GFF1879 0.32 -0.3 552,186 - GFF1879 0.32 +0.5 552,267 - GFF1879 0.38 -0.2 552,267 - GFF1879 0.38 -0.5 552,267 - GFF1879 0.38 +0.6 552,267 - GFF1879 0.38 -0.9 552,267 - GFF1879 0.38 +0.7 552,267 - GFF1879 0.38 -1.1 552,267 - GFF1879 0.38 +0.4 552,267 - GFF1879 0.38 +1.1 552,308 + GFF1879 0.41 +0.1 552,566 + GFF1879 0.60 -0.3 552,620 + GFF1879 0.64 -0.1 552,620 + GFF1879 0.64 -0.9 552,620 + GFF1879 0.64 -0.1 552,620 + GFF1879 0.64 +0.7 552,620 + GFF1879 0.64 +0.4 552,620 + GFF1879 0.64 -0.9 552,620 + GFF1879 0.64 -0.5 552,621 - GFF1879 0.64 -0.5 552,621 - GFF1879 0.64 -0.9 552,621 - GFF1879 0.64 +0.1 552,621 - GFF1879 0.64 +0.1 552,621 - GFF1879 0.64 -1.9 552,717 - GFF1879 0.71 -0.2 552,717 - GFF1879 0.71 -1.6 552,923 + GFF1879 0.87 -1.5 552,923 + GFF1879 0.87 -0.3 552,923 + GFF1879 0.87 -0.4 552,923 + GFF1879 0.87 +0.5 552,924 - GFF1879 0.87 +0.4 552,924 - GFF1879 0.87 +0.1 552,941 + GFF1879 0.88 -0.2 552,947 + GFF1879 0.88 -1.3 552,948 - GFF1879 0.89 -0.5 552,948 - GFF1879 0.89 -0.5 552,948 - GFF1879 0.89 +0.1 552,948 - GFF1879 0.89 -0.6 553,028 + -1.5 553,028 + -0.5 553,029 - +0.1 553,029 - -0.2 553,029 - +1.7 553,029 - +0.7 553,029 - -0.5 553,214 + +0.6 553,214 + -0.9 553,214 + -0.5 553,214 + +0.4 553,214 + -0.2 553,214 + +0.1 553,214 + -0.5 553,214 + -0.5 553,214 + -0.4 553,214 + -0.1 553,214 + -0.6 553,214 + +1.7 553,215 - +1.5 553,215 - -0.9 553,215 - -0.3 553,215 - +0.1 553,215 - -0.1 553,215 - +0.0 553,215 - +1.1 553,225 - -0.5 553,242 + -0.6 553,242 + +0.1 553,243 - -0.3 553,318 + -0.1 553,319 - +1.2 553,319 - -0.4 553,375 + -0.5 553,375 + -0.4 553,375 + -0.7 553,375 + -1.7 553,376 - -0.5 553,376 - -0.2 553,411 + -1.0 553,412 - -0.6 553,412 - -1.1 553,439 - -0.8 553,471 + +0.4 553,471 + +0.1 553,472 - +0.2 553,472 - +0.9 553,475 + -0.6 553,475 + -0.3 553,475 + -0.4 553,475 + -2.0 553,475 + -0.4 553,475 + -0.7 553,475 + -0.1 553,475 + +0.5 553,475 + -1.4 553,475 + +0.5 553,475 + -0.3 553,476 - -0.8 553,476 - -0.2 553,476 - -0.0 553,476 - -1.4 553,476 - +0.1 553,476 - -0.5 553,476 - -0.3 553,476 - +0.0 553,498 + -0.4 553,510 + +0.2 553,510 + -0.9 553,511 - +0.3 553,511 - -0.3 553,511 - +1.2 553,511 - +0.9 553,511 - -0.1 553,511 - -0.1 553,511 - -0.7 553,511 - -0.1 553,511 - -1.7 553,511 - +0.7 553,894 + GFF1880 0.28 -1.3 553,894 + GFF1880 0.28 +0.3 553,894 + GFF1880 0.28 -0.3 553,894 + GFF1880 0.28 -0.6 553,895 - GFF1880 0.29 +0.4 553,895 - GFF1880 0.29 +0.0
Or see this region's nucleotide sequence