Experiment: no phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF6894 and GFF6895 are separated by 5 nucleotides GFF6895 and GFF6896 are separated by 21 nucleotides GFF6896 and GFF6897 are separated by 13 nucleotides
GFF6894 - FIG00454405: hypothetical protein, at 27,031 to 27,723
GFF6894
GFF6895 - L-lysine permease, at 27,729 to 28,361
GFF6895
GFF6896 - pyridoxal-phosphate dependent enzyme family protein, at 28,383 to 29,354
GFF6896
GFF6897 - Creatinine amidohydrolase (EC 3.5.2.10), at 29,368 to 30,198
GFF6897
Position (kb) 28
29
30 Strain fitness (log2 ratio) -2
-1
0
1
2 at 27.390 kb on + strand, within GFF6894 at 27.390 kb on + strand, within GFF6894 at 27.390 kb on + strand, within GFF6894 at 27.390 kb on + strand, within GFF6894 at 27.390 kb on + strand, within GFF6894 at 27.391 kb on - strand, within GFF6894 at 27.391 kb on - strand, within GFF6894 at 27.487 kb on + strand, within GFF6894 at 27.487 kb on + strand, within GFF6894 at 27.488 kb on - strand, within GFF6894 at 27.488 kb on - strand, within GFF6894 at 27.488 kb on - strand, within GFF6894 at 27.488 kb on - strand, within GFF6894 at 27.807 kb on + strand, within GFF6895 at 27.807 kb on + strand, within GFF6895 at 27.807 kb on + strand, within GFF6895 at 27.807 kb on + strand, within GFF6895 at 27.807 kb on + strand, within GFF6895 at 27.807 kb on + strand, within GFF6895 at 27.807 kb on + strand, within GFF6895 at 27.807 kb on + strand, within GFF6895 at 27.807 kb on + strand, within GFF6895 at 27.807 kb on + strand, within GFF6895 at 27.807 kb on + strand, within GFF6895 at 27.807 kb on + strand, within GFF6895 at 27.807 kb on + strand, within GFF6895 at 27.807 kb on + strand, within GFF6895 at 27.807 kb on + strand, within GFF6895 at 27.807 kb on + strand, within GFF6895 at 27.807 kb on + strand, within GFF6895 at 27.808 kb on - strand, within GFF6895 at 27.808 kb on - strand, within GFF6895 at 27.808 kb on - strand, within GFF6895 at 27.808 kb on - strand, within GFF6895 at 27.808 kb on - strand, within GFF6895 at 27.808 kb on - strand, within GFF6895 at 27.808 kb on - strand, within GFF6895 at 27.808 kb on - strand, within GFF6895 at 27.808 kb on - strand, within GFF6895 at 27.808 kb on - strand, within GFF6895 at 27.808 kb on - strand, within GFF6895 at 27.808 kb on - strand, within GFF6895 at 27.808 kb on - strand, within GFF6895 at 27.808 kb on - strand, within GFF6895 at 27.808 kb on - strand, within GFF6895 at 27.808 kb on - strand, within GFF6895 at 27.975 kb on + strand, within GFF6895 at 27.975 kb on + strand, within GFF6895 at 27.975 kb on + strand, within GFF6895 at 27.975 kb on + strand, within GFF6895 at 27.976 kb on - strand, within GFF6895 at 27.976 kb on - strand, within GFF6895 at 28.119 kb on + strand, within GFF6895 at 28.119 kb on + strand, within GFF6895 at 28.119 kb on + strand, within GFF6895 at 28.119 kb on + strand, within GFF6895 at 28.119 kb on + strand, within GFF6895 at 28.119 kb on + strand, within GFF6895 at 28.119 kb on + strand, within GFF6895 at 28.119 kb on + strand, within GFF6895 at 28.119 kb on + strand, within GFF6895 at 28.119 kb on + strand, within GFF6895 at 28.120 kb on - strand, within GFF6895 at 28.120 kb on - strand, within GFF6895 at 28.120 kb on - strand, within GFF6895 at 28.120 kb on - strand, within GFF6895 at 28.120 kb on - strand, within GFF6895 at 28.120 kb on - strand, within GFF6895 at 28.299 kb on + strand at 28.299 kb on + strand at 28.299 kb on + strand at 28.299 kb on + strand at 28.300 kb on - strand at 28.359 kb on + strand at 28.359 kb on + strand at 28.359 kb on + strand at 28.359 kb on + strand at 28.359 kb on + strand at 28.359 kb on + strand at 28.359 kb on + strand at 28.360 kb on - strand at 28.360 kb on - strand at 28.360 kb on - strand at 28.360 kb on - strand at 28.360 kb on - strand at 28.360 kb on - strand at 28.360 kb on - strand at 28.360 kb on - strand at 28.360 kb on - strand at 28.360 kb on - strand at 28.360 kb on - strand at 28.360 kb on - strand at 28.360 kb on - strand at 28.360 kb on - strand at 28.455 kb on + strand at 28.455 kb on + strand at 28.455 kb on + strand at 28.455 kb on + strand at 28.456 kb on - strand at 28.456 kb on - strand at 28.456 kb on - strand at 28.456 kb on - strand at 28.456 kb on - strand at 28.557 kb on + strand, within GFF6896 at 28.558 kb on + strand, within GFF6896 at 28.558 kb on - strand, within GFF6896 at 28.860 kb on + strand, within GFF6896 at 28.860 kb on + strand, within GFF6896 at 28.860 kb on + strand, within GFF6896 at 28.860 kb on + strand, within GFF6896 at 28.860 kb on + strand, within GFF6896 at 28.861 kb on - strand, within GFF6896 at 28.861 kb on - strand, within GFF6896 at 28.861 kb on - strand, within GFF6896 at 28.861 kb on - strand, within GFF6896 at 28.861 kb on - strand, within GFF6896 at 28.861 kb on - strand, within GFF6896 at 29.369 kb on + strand at 29.370 kb on - strand at 29.370 kb on - strand at 29.370 kb on - strand at 29.370 kb on - strand at 30.209 kb on + strand at 30.209 kb on + strand at 30.209 kb on + strand at 30.209 kb on + strand at 30.210 kb on - strand at 30.210 kb on - strand at 30.210 kb on - strand at 30.285 kb on + strand at 30.286 kb on - strand at 30.286 kb on - strand at 30.286 kb on - strand at 30.295 kb on + strand at 30.295 kb on + strand at 30.295 kb on + strand at 30.296 kb on - strand at 30.296 kb on - strand at 30.296 kb on - strand at 30.296 kb on - strand at 30.296 kb on - strand at 30.296 kb on - strand at 30.296 kb on - strand at 30.296 kb on - strand at 30.298 kb on - strand at 30.298 kb on - strand at 30.315 kb on + strand at 30.315 kb on + strand at 30.315 kb on + strand at 30.315 kb on + strand at 30.315 kb on + strand at 30.316 kb on - strand at 30.316 kb on - strand at 30.338 kb on - strand at 30.339 kb on + strand at 30.339 kb on + strand at 30.339 kb on + strand at 30.339 kb on + strand at 30.340 kb on - strand at 30.340 kb on - strand at 30.340 kb on - strand at 30.340 kb on - strand at 30.340 kb on - strand at 30.340 kb on - strand at 30.340 kb on - strand at 30.340 kb on - strand at 30.343 kb on + strand at 30.343 kb on + strand at 30.343 kb on + strand at 30.344 kb on - strand at 30.344 kb on - strand at 30.344 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction no phage control remove 27,390 + GFF6894 0.52 +0.3 27,390 + GFF6894 0.52 -0.7 27,390 + GFF6894 0.52 +0.2 27,390 + GFF6894 0.52 -0.4 27,390 + GFF6894 0.52 +0.1 27,391 - GFF6894 0.52 +0.4 27,391 - GFF6894 0.52 -0.2 27,487 + GFF6894 0.66 -0.2 27,487 + GFF6894 0.66 -0.2 27,488 - GFF6894 0.66 -0.1 27,488 - GFF6894 0.66 -0.6 27,488 - GFF6894 0.66 -0.0 27,488 - GFF6894 0.66 +0.3 27,807 + GFF6895 0.12 -1.1 27,807 + GFF6895 0.12 -0.4 27,807 + GFF6895 0.12 +0.1 27,807 + GFF6895 0.12 -1.0 27,807 + GFF6895 0.12 -0.1 27,807 + GFF6895 0.12 +0.4 27,807 + GFF6895 0.12 +0.9 27,807 + GFF6895 0.12 -1.6 27,807 + GFF6895 0.12 -0.0 27,807 + GFF6895 0.12 +0.2 27,807 + GFF6895 0.12 -0.9 27,807 + GFF6895 0.12 +1.3 27,807 + GFF6895 0.12 -0.3 27,807 + GFF6895 0.12 -0.6 27,807 + GFF6895 0.12 +2.2 27,807 + GFF6895 0.12 +0.3 27,807 + GFF6895 0.12 +0.9 27,808 - GFF6895 0.12 +0.2 27,808 - GFF6895 0.12 +0.5 27,808 - GFF6895 0.12 -1.2 27,808 - GFF6895 0.12 -0.3 27,808 - GFF6895 0.12 -1.1 27,808 - GFF6895 0.12 -0.3 27,808 - GFF6895 0.12 -0.2 27,808 - GFF6895 0.12 -1.1 27,808 - GFF6895 0.12 -0.1 27,808 - GFF6895 0.12 +0.7 27,808 - GFF6895 0.12 +0.4 27,808 - GFF6895 0.12 +0.9 27,808 - GFF6895 0.12 +0.5 27,808 - GFF6895 0.12 +0.1 27,808 - GFF6895 0.12 -0.8 27,808 - GFF6895 0.12 +0.4 27,975 + GFF6895 0.39 -0.6 27,975 + GFF6895 0.39 -0.4 27,975 + GFF6895 0.39 -0.4 27,975 + GFF6895 0.39 +0.9 27,976 - GFF6895 0.39 -0.2 27,976 - GFF6895 0.39 +1.1 28,119 + GFF6895 0.62 -0.1 28,119 + GFF6895 0.62 -0.0 28,119 + GFF6895 0.62 -0.7 28,119 + GFF6895 0.62 +0.6 28,119 + GFF6895 0.62 +0.0 28,119 + GFF6895 0.62 -0.2 28,119 + GFF6895 0.62 +0.2 28,119 + GFF6895 0.62 +0.2 28,119 + GFF6895 0.62 -0.3 28,119 + GFF6895 0.62 -0.1 28,120 - GFF6895 0.62 +0.2 28,120 - GFF6895 0.62 -0.3 28,120 - GFF6895 0.62 -1.3 28,120 - GFF6895 0.62 +0.2 28,120 - GFF6895 0.62 -0.0 28,120 - GFF6895 0.62 +0.2 28,299 + -0.3 28,299 + +0.3 28,299 + +0.1 28,299 + +1.7 28,300 - -0.3 28,359 + -0.9 28,359 + -0.7 28,359 + +0.5 28,359 + -1.2 28,359 + +0.2 28,359 + +0.1 28,359 + -0.5 28,360 - -0.1 28,360 - +0.7 28,360 - +0.3 28,360 - -0.4 28,360 - +0.1 28,360 - -0.9 28,360 - +0.2 28,360 - -0.0 28,360 - +0.7 28,360 - +0.0 28,360 - -0.0 28,360 - -0.8 28,360 - +0.8 28,360 - -0.8 28,455 + +1.7 28,455 + -0.5 28,455 + +0.4 28,455 + -1.1 28,456 - +0.1 28,456 - -0.8 28,456 - -0.0 28,456 - -0.1 28,456 - -0.1 28,557 + GFF6896 0.18 -0.4 28,558 + GFF6896 0.18 -0.4 28,558 - GFF6896 0.18 +0.7 28,860 + GFF6896 0.49 +1.2 28,860 + GFF6896 0.49 -0.9 28,860 + GFF6896 0.49 +0.0 28,860 + GFF6896 0.49 +0.0 28,860 + GFF6896 0.49 -0.3 28,861 - GFF6896 0.49 -0.0 28,861 - GFF6896 0.49 +0.2 28,861 - GFF6896 0.49 +0.2 28,861 - GFF6896 0.49 -0.2 28,861 - GFF6896 0.49 +0.1 28,861 - GFF6896 0.49 +0.9 29,369 + -0.6 29,370 - +0.1 29,370 - -0.1 29,370 - -0.4 29,370 - -0.7 30,209 + -0.7 30,209 + +0.1 30,209 + -1.2 30,209 + +0.9 30,210 - +0.1 30,210 - -1.9 30,210 - -0.1 30,285 + -1.7 30,286 - -1.0 30,286 - +0.4 30,286 - -0.3 30,295 + -0.8 30,295 + -1.1 30,295 + -1.5 30,296 - +0.1 30,296 - +0.5 30,296 - +0.7 30,296 - -0.3 30,296 - +0.5 30,296 - +0.7 30,296 - +0.5 30,296 - +0.1 30,298 - +0.7 30,298 - -1.0 30,315 + -0.5 30,315 + -1.3 30,315 + -1.9 30,315 + -2.0 30,315 + -0.2 30,316 - -0.1 30,316 - -0.6 30,338 - -0.3 30,339 + -0.4 30,339 + -0.0 30,339 + -0.1 30,339 + -0.3 30,340 - -0.0 30,340 - +0.2 30,340 - -0.6 30,340 - -0.3 30,340 - -0.8 30,340 - +0.1 30,340 - -0.9 30,340 - -1.1 30,343 + -0.0 30,343 + -1.5 30,343 + -0.5 30,344 - +0.1 30,344 - -0.7 30,344 - +0.7
Or see this region's nucleotide sequence