Experiment: no phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF6645 and GFF6646 are separated by 45 nucleotides GFF6646 and GFF6647 are separated by 42 nucleotides GFF6647 and GFF6648 are separated by 86 nucleotides
GFF6645 - no description, at 19,489 to 19,869
GFF6645
GFF6646 - no description, at 19,915 to 20,541
GFF6646
GFF6647 - Two-component transcriptional response regulator, LuxR family, at 20,584 to 21,288
GFF6647
GFF6648 - hypothetical protein, at 21,375 to 23,114
GFF6648
Position (kb) 20
21
22 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 19.732 kb on + strand, within GFF6645 at 19.732 kb on + strand, within GFF6645 at 19.732 kb on + strand, within GFF6645 at 19.732 kb on + strand, within GFF6645 at 19.732 kb on + strand, within GFF6645 at 19.732 kb on + strand, within GFF6645 at 19.733 kb on - strand, within GFF6645 at 19.733 kb on - strand, within GFF6645 at 19.733 kb on - strand, within GFF6645 at 19.733 kb on - strand, within GFF6645 at 19.733 kb on - strand, within GFF6645 at 19.733 kb on - strand, within GFF6645 at 19.733 kb on - strand, within GFF6645 at 19.733 kb on - strand, within GFF6645 at 19.811 kb on + strand, within GFF6645 at 19.811 kb on + strand, within GFF6645 at 19.812 kb on - strand, within GFF6645 at 19.812 kb on - strand, within GFF6645 at 19.899 kb on + strand at 19.899 kb on + strand at 19.899 kb on + strand at 19.900 kb on - strand at 19.900 kb on - strand at 19.900 kb on - strand at 19.978 kb on + strand, within GFF6646 at 19.978 kb on + strand, within GFF6646 at 19.979 kb on - strand, within GFF6646 at 19.979 kb on - strand, within GFF6646 at 19.979 kb on - strand, within GFF6646 at 20.030 kb on + strand, within GFF6646 at 20.030 kb on + strand, within GFF6646 at 20.030 kb on + strand, within GFF6646 at 20.031 kb on - strand, within GFF6646 at 20.031 kb on - strand, within GFF6646 at 20.031 kb on - strand, within GFF6646 at 20.031 kb on - strand, within GFF6646 at 20.041 kb on + strand, within GFF6646 at 20.041 kb on + strand, within GFF6646 at 20.041 kb on + strand, within GFF6646 at 20.041 kb on + strand, within GFF6646 at 20.041 kb on + strand, within GFF6646 at 20.041 kb on + strand, within GFF6646 at 20.042 kb on - strand, within GFF6646 at 20.042 kb on - strand, within GFF6646 at 20.042 kb on - strand, within GFF6646 at 20.042 kb on - strand, within GFF6646 at 20.042 kb on - strand, within GFF6646 at 20.042 kb on - strand, within GFF6646 at 20.042 kb on - strand, within GFF6646 at 20.042 kb on - strand, within GFF6646 at 20.042 kb on - strand, within GFF6646 at 20.042 kb on - strand, within GFF6646 at 20.050 kb on + strand, within GFF6646 at 20.050 kb on + strand, within GFF6646 at 20.218 kb on + strand, within GFF6646 at 20.218 kb on + strand, within GFF6646 at 20.219 kb on - strand, within GFF6646 at 20.219 kb on - strand, within GFF6646 at 20.281 kb on + strand, within GFF6646 at 20.281 kb on + strand, within GFF6646 at 20.281 kb on + strand, within GFF6646 at 20.281 kb on + strand, within GFF6646 at 20.281 kb on + strand, within GFF6646 at 20.281 kb on + strand, within GFF6646 at 20.281 kb on + strand, within GFF6646 at 20.281 kb on + strand, within GFF6646 at 20.281 kb on + strand, within GFF6646 at 20.281 kb on + strand, within GFF6646 at 20.281 kb on + strand, within GFF6646 at 20.282 kb on - strand, within GFF6646 at 20.282 kb on - strand, within GFF6646 at 20.282 kb on - strand, within GFF6646 at 20.282 kb on - strand, within GFF6646 at 20.282 kb on - strand, within GFF6646 at 20.282 kb on - strand, within GFF6646 at 20.282 kb on - strand, within GFF6646 at 20.422 kb on + strand, within GFF6646 at 20.422 kb on + strand, within GFF6646 at 20.422 kb on + strand, within GFF6646 at 20.422 kb on + strand, within GFF6646 at 20.422 kb on + strand, within GFF6646 at 20.423 kb on - strand, within GFF6646 at 20.423 kb on - strand, within GFF6646 at 20.423 kb on - strand, within GFF6646 at 20.456 kb on - strand, within GFF6646 at 20.456 kb on - strand, within GFF6646 at 20.456 kb on - strand, within GFF6646 at 20.482 kb on + strand at 20.512 kb on + strand at 20.512 kb on + strand at 20.512 kb on + strand at 20.512 kb on + strand at 20.512 kb on + strand at 20.512 kb on + strand at 20.512 kb on + strand at 20.512 kb on + strand at 20.512 kb on + strand at 20.512 kb on + strand at 20.512 kb on + strand at 20.512 kb on + strand at 20.512 kb on + strand at 20.512 kb on + strand at 20.512 kb on + strand at 20.512 kb on + strand at 20.512 kb on + strand at 20.512 kb on + strand at 20.512 kb on + strand at 20.513 kb on - strand at 20.513 kb on - strand at 20.513 kb on - strand at 20.513 kb on - strand at 20.513 kb on - strand at 20.513 kb on - strand at 20.513 kb on - strand at 20.513 kb on - strand at 20.513 kb on - strand at 20.513 kb on - strand at 20.513 kb on - strand at 20.513 kb on - strand at 20.513 kb on - strand at 20.513 kb on - strand at 20.513 kb on - strand at 20.513 kb on - strand at 20.513 kb on - strand at 20.513 kb on - strand at 20.513 kb on - strand at 20.513 kb on - strand at 20.513 kb on - strand at 20.513 kb on - strand at 20.539 kb on + strand at 20.539 kb on + strand at 20.677 kb on + strand, within GFF6647 at 20.677 kb on + strand, within GFF6647 at 20.677 kb on + strand, within GFF6647 at 20.678 kb on - strand, within GFF6647 at 20.767 kb on + strand, within GFF6647 at 20.767 kb on + strand, within GFF6647 at 20.768 kb on - strand, within GFF6647 at 20.926 kb on + strand, within GFF6647 at 20.926 kb on + strand, within GFF6647 at 20.927 kb on - strand, within GFF6647 at 21.204 kb on + strand, within GFF6647 at 21.204 kb on + strand, within GFF6647 at 21.205 kb on - strand, within GFF6647 at 21.217 kb on + strand, within GFF6647 at 21.217 kb on + strand, within GFF6647 at 21.217 kb on + strand, within GFF6647 at 21.217 kb on + strand, within GFF6647 at 21.217 kb on + strand, within GFF6647 at 21.217 kb on + strand, within GFF6647 at 21.217 kb on + strand, within GFF6647 at 21.218 kb on - strand at 21.218 kb on - strand at 21.486 kb on + strand at 21.487 kb on - strand at 21.487 kb on - strand at 21.487 kb on - strand at 21.543 kb on + strand at 21.543 kb on + strand at 21.543 kb on + strand at 21.543 kb on + strand at 21.543 kb on + strand at 21.544 kb on - strand at 21.717 kb on + strand, within GFF6648 at 21.865 kb on + strand, within GFF6648 at 21.866 kb on - strand, within GFF6648 at 21.933 kb on + strand, within GFF6648 at 21.934 kb on - strand, within GFF6648 at 21.934 kb on - strand, within GFF6648 at 21.934 kb on - strand, within GFF6648 at 21.934 kb on - strand, within GFF6648 at 22.026 kb on + strand, within GFF6648 at 22.026 kb on + strand, within GFF6648 at 22.026 kb on + strand, within GFF6648 at 22.026 kb on + strand, within GFF6648 at 22.026 kb on + strand, within GFF6648 at 22.026 kb on + strand, within GFF6648 at 22.026 kb on + strand, within GFF6648 at 22.026 kb on + strand, within GFF6648 at 22.026 kb on + strand, within GFF6648 at 22.026 kb on + strand, within GFF6648 at 22.026 kb on + strand, within GFF6648 at 22.026 kb on + strand, within GFF6648 at 22.026 kb on + strand, within GFF6648 at 22.026 kb on + strand, within GFF6648 at 22.027 kb on - strand, within GFF6648 at 22.027 kb on - strand, within GFF6648 at 22.027 kb on - strand, within GFF6648 at 22.027 kb on - strand, within GFF6648 at 22.027 kb on - strand, within GFF6648 at 22.027 kb on - strand, within GFF6648 at 22.027 kb on - strand, within GFF6648 at 22.027 kb on - strand, within GFF6648
Per-strain Table
Position Strand Gene LocusTag Fraction no phage control remove 19,732 + GFF6645 0.64 +0.5 19,732 + GFF6645 0.64 -0.4 19,732 + GFF6645 0.64 +0.4 19,732 + GFF6645 0.64 -0.0 19,732 + GFF6645 0.64 +0.2 19,732 + GFF6645 0.64 +0.2 19,733 - GFF6645 0.64 +0.0 19,733 - GFF6645 0.64 -0.6 19,733 - GFF6645 0.64 +1.0 19,733 - GFF6645 0.64 -1.6 19,733 - GFF6645 0.64 +0.4 19,733 - GFF6645 0.64 -0.0 19,733 - GFF6645 0.64 -1.2 19,733 - GFF6645 0.64 -0.6 19,811 + GFF6645 0.85 -0.3 19,811 + GFF6645 0.85 +0.5 19,812 - GFF6645 0.85 -0.3 19,812 - GFF6645 0.85 +0.9 19,899 + +0.2 19,899 + -1.2 19,899 + -1.0 19,900 - -0.6 19,900 - +0.8 19,900 - +0.2 19,978 + GFF6646 0.10 -0.4 19,978 + GFF6646 0.10 -0.9 19,979 - GFF6646 0.10 +0.1 19,979 - GFF6646 0.10 +0.4 19,979 - GFF6646 0.10 -0.4 20,030 + GFF6646 0.18 +3.0 20,030 + GFF6646 0.18 -0.5 20,030 + GFF6646 0.18 -0.6 20,031 - GFF6646 0.19 -0.1 20,031 - GFF6646 0.19 -0.9 20,031 - GFF6646 0.19 -0.1 20,031 - GFF6646 0.19 -1.9 20,041 + GFF6646 0.20 +0.2 20,041 + GFF6646 0.20 -1.8 20,041 + GFF6646 0.20 +0.8 20,041 + GFF6646 0.20 +0.4 20,041 + GFF6646 0.20 -1.8 20,041 + GFF6646 0.20 -0.4 20,042 - GFF6646 0.20 -1.1 20,042 - GFF6646 0.20 -0.2 20,042 - GFF6646 0.20 -0.9 20,042 - GFF6646 0.20 +0.1 20,042 - GFF6646 0.20 +1.4 20,042 - GFF6646 0.20 -0.6 20,042 - GFF6646 0.20 +0.2 20,042 - GFF6646 0.20 -0.6 20,042 - GFF6646 0.20 -0.1 20,042 - GFF6646 0.20 +0.2 20,050 + GFF6646 0.22 -0.1 20,050 + GFF6646 0.22 -1.0 20,218 + GFF6646 0.48 -0.6 20,218 + GFF6646 0.48 +0.5 20,219 - GFF6646 0.48 +0.4 20,219 - GFF6646 0.48 -0.3 20,281 + GFF6646 0.58 -0.7 20,281 + GFF6646 0.58 -0.6 20,281 + GFF6646 0.58 -0.3 20,281 + GFF6646 0.58 +0.1 20,281 + GFF6646 0.58 +0.4 20,281 + GFF6646 0.58 -1.4 20,281 + GFF6646 0.58 -0.7 20,281 + GFF6646 0.58 +0.8 20,281 + GFF6646 0.58 -0.4 20,281 + GFF6646 0.58 -0.8 20,281 + GFF6646 0.58 -0.3 20,282 - GFF6646 0.59 -0.2 20,282 - GFF6646 0.59 +0.2 20,282 - GFF6646 0.59 -0.7 20,282 - GFF6646 0.59 -0.4 20,282 - GFF6646 0.59 -0.9 20,282 - GFF6646 0.59 -0.2 20,282 - GFF6646 0.59 -1.2 20,422 + GFF6646 0.81 -0.4 20,422 + GFF6646 0.81 -0.3 20,422 + GFF6646 0.81 -0.0 20,422 + GFF6646 0.81 -0.6 20,422 + GFF6646 0.81 -0.4 20,423 - GFF6646 0.81 +0.5 20,423 - GFF6646 0.81 -0.4 20,423 - GFF6646 0.81 -0.4 20,456 - GFF6646 0.86 -0.0 20,456 - GFF6646 0.86 +0.1 20,456 - GFF6646 0.86 +0.4 20,482 + -0.2 20,512 + -0.8 20,512 + -3.1 20,512 + +0.4 20,512 + -0.1 20,512 + -0.3 20,512 + +0.7 20,512 + +0.8 20,512 + -0.1 20,512 + +0.4 20,512 + +0.9 20,512 + -0.5 20,512 + -0.2 20,512 + -0.8 20,512 + -0.9 20,512 + +0.2 20,512 + -0.1 20,512 + +0.6 20,512 + -0.5 20,512 + -1.3 20,513 - -0.2 20,513 - -0.4 20,513 - +0.6 20,513 - -0.2 20,513 - +1.4 20,513 - -0.0 20,513 - +0.1 20,513 - +1.6 20,513 - -0.6 20,513 - +1.1 20,513 - -1.3 20,513 - -0.4 20,513 - -0.3 20,513 - +0.4 20,513 - -0.2 20,513 - -0.1 20,513 - +0.1 20,513 - -0.5 20,513 - +0.8 20,513 - -0.3 20,513 - +0.2 20,513 - +0.1 20,539 + -1.2 20,539 + +0.1 20,677 + GFF6647 0.13 -0.3 20,677 + GFF6647 0.13 +0.8 20,677 + GFF6647 0.13 -0.2 20,678 - GFF6647 0.13 -0.1 20,767 + GFF6647 0.26 -0.9 20,767 + GFF6647 0.26 -0.2 20,768 - GFF6647 0.26 -0.4 20,926 + GFF6647 0.49 -0.9 20,926 + GFF6647 0.49 -0.7 20,927 - GFF6647 0.49 -0.5 21,204 + GFF6647 0.88 +0.1 21,204 + GFF6647 0.88 -0.8 21,205 - GFF6647 0.88 +0.1 21,217 + GFF6647 0.90 -0.4 21,217 + GFF6647 0.90 -0.1 21,217 + GFF6647 0.90 -0.3 21,217 + GFF6647 0.90 +0.0 21,217 + GFF6647 0.90 -1.3 21,217 + GFF6647 0.90 -0.8 21,217 + GFF6647 0.90 -0.7 21,218 - +0.4 21,218 - +0.4 21,486 + -0.2 21,487 - +0.6 21,487 - -0.4 21,487 - -2.6 21,543 + +0.9 21,543 + -0.1 21,543 + -1.9 21,543 + -0.7 21,543 + -1.8 21,544 - -1.1 21,717 + GFF6648 0.20 +0.8 21,865 + GFF6648 0.28 -0.4 21,866 - GFF6648 0.28 +0.8 21,933 + GFF6648 0.32 -0.4 21,934 - GFF6648 0.32 -1.7 21,934 - GFF6648 0.32 -1.8 21,934 - GFF6648 0.32 -1.2 21,934 - GFF6648 0.32 -0.5 22,026 + GFF6648 0.37 +0.5 22,026 + GFF6648 0.37 -0.6 22,026 + GFF6648 0.37 +0.6 22,026 + GFF6648 0.37 +0.4 22,026 + GFF6648 0.37 +0.2 22,026 + GFF6648 0.37 +0.1 22,026 + GFF6648 0.37 -1.0 22,026 + GFF6648 0.37 +0.6 22,026 + GFF6648 0.37 -0.3 22,026 + GFF6648 0.37 +0.1 22,026 + GFF6648 0.37 +0.7 22,026 + GFF6648 0.37 -0.9 22,026 + GFF6648 0.37 +0.6 22,026 + GFF6648 0.37 -0.3 22,027 - GFF6648 0.37 -0.2 22,027 - GFF6648 0.37 -0.5 22,027 - GFF6648 0.37 +0.6 22,027 - GFF6648 0.37 -0.3 22,027 - GFF6648 0.37 +0.1 22,027 - GFF6648 0.37 -0.3 22,027 - GFF6648 0.37 -0.8 22,027 - GFF6648 0.37 -0.4
Or see this region's nucleotide sequence