Experiment: no phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4946 and GFF4947 overlap by 4 nucleotides GFF4947 and GFF4948 are separated by 180 nucleotides
GFF4946 - Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3), at 40,412 to 42,181
GFF4946
GFF4947 - Erythritol kinase EryA (EC 2.7.1.27), at 42,178 to 43,665
GFF4947
GFF4948 - ABC transporter, substrate-binding protein (cluster 2, ribose/xylose/arabinose/galactose), at 43,846 to 44,892
GFF4948
Position (kb) 42
43
44 Strain fitness (log2 ratio) -1
0
1 at 41.202 kb on + strand, within GFF4946 at 41.203 kb on - strand, within GFF4946 at 41.292 kb on + strand, within GFF4946 at 41.328 kb on + strand, within GFF4946 at 41.328 kb on + strand, within GFF4946 at 41.528 kb on - strand, within GFF4946 at 41.556 kb on + strand, within GFF4946 at 41.557 kb on - strand, within GFF4946 at 41.557 kb on - strand, within GFF4946 at 41.557 kb on - strand, within GFF4946 at 41.557 kb on - strand, within GFF4946 at 41.557 kb on - strand, within GFF4946 at 41.758 kb on - strand, within GFF4946 at 41.758 kb on - strand, within GFF4946 at 41.758 kb on - strand, within GFF4946 at 41.758 kb on - strand, within GFF4946 at 41.758 kb on - strand, within GFF4946 at 41.758 kb on - strand, within GFF4946 at 41.974 kb on - strand, within GFF4946 at 42.359 kb on + strand, within GFF4947 at 42.360 kb on - strand, within GFF4947 at 42.770 kb on + strand, within GFF4947 at 42.770 kb on + strand, within GFF4947 at 42.770 kb on + strand, within GFF4947 at 42.771 kb on - strand, within GFF4947 at 42.771 kb on - strand, within GFF4947 at 42.771 kb on - strand, within GFF4947 at 43.175 kb on + strand, within GFF4947 at 43.175 kb on + strand, within GFF4947 at 43.175 kb on + strand, within GFF4947 at 43.175 kb on + strand, within GFF4947 at 43.176 kb on - strand, within GFF4947 at 43.403 kb on + strand, within GFF4947 at 43.403 kb on + strand, within GFF4947 at 43.403 kb on + strand, within GFF4947 at 43.403 kb on + strand, within GFF4947 at 43.403 kb on + strand, within GFF4947 at 43.404 kb on - strand, within GFF4947 at 43.720 kb on + strand at 43.720 kb on + strand at 43.720 kb on + strand at 43.720 kb on + strand at 43.720 kb on + strand at 43.720 kb on + strand at 43.720 kb on + strand at 43.720 kb on + strand at 43.720 kb on + strand at 43.720 kb on + strand at 43.721 kb on - strand at 43.721 kb on - strand at 43.721 kb on - strand at 43.721 kb on - strand at 43.721 kb on - strand at 43.721 kb on - strand at 43.721 kb on - strand at 43.721 kb on - strand at 43.721 kb on - strand at 43.721 kb on - strand at 43.721 kb on - strand at 43.721 kb on - strand at 43.721 kb on - strand at 43.743 kb on + strand at 43.743 kb on + strand at 43.744 kb on - strand at 43.855 kb on - strand at 43.975 kb on + strand, within GFF4948 at 43.976 kb on - strand, within GFF4948 at 43.976 kb on - strand, within GFF4948 at 44.008 kb on + strand, within GFF4948 at 44.009 kb on - strand, within GFF4948 at 44.009 kb on - strand, within GFF4948 at 44.023 kb on + strand, within GFF4948 at 44.024 kb on - strand, within GFF4948 at 44.090 kb on - strand, within GFF4948 at 44.479 kb on + strand, within GFF4948 at 44.480 kb on - strand, within GFF4948
Per-strain Table
Position Strand Gene LocusTag Fraction no phage control remove 41,202 + GFF4946 0.45 +1.2 41,203 - GFF4946 0.45 -0.7 41,292 + GFF4946 0.50 -0.3 41,328 + GFF4946 0.52 +0.5 41,328 + GFF4946 0.52 -0.7 41,528 - GFF4946 0.63 -0.1 41,556 + GFF4946 0.65 +1.7 41,557 - GFF4946 0.65 -0.3 41,557 - GFF4946 0.65 -0.7 41,557 - GFF4946 0.65 +0.5 41,557 - GFF4946 0.65 +0.0 41,557 - GFF4946 0.65 +0.0 41,758 - GFF4946 0.76 +0.2 41,758 - GFF4946 0.76 -0.1 41,758 - GFF4946 0.76 +0.1 41,758 - GFF4946 0.76 -0.3 41,758 - GFF4946 0.76 +1.0 41,758 - GFF4946 0.76 +0.2 41,974 - GFF4946 0.88 +1.1 42,359 + GFF4947 0.12 +0.7 42,360 - GFF4947 0.12 +0.0 42,770 + GFF4947 0.40 +0.5 42,770 + GFF4947 0.40 -0.9 42,770 + GFF4947 0.40 -0.2 42,771 - GFF4947 0.40 -0.5 42,771 - GFF4947 0.40 -0.3 42,771 - GFF4947 0.40 -1.2 43,175 + GFF4947 0.67 +0.2 43,175 + GFF4947 0.67 -0.4 43,175 + GFF4947 0.67 -0.5 43,175 + GFF4947 0.67 -0.3 43,176 - GFF4947 0.67 -0.8 43,403 + GFF4947 0.82 +0.1 43,403 + GFF4947 0.82 -0.1 43,403 + GFF4947 0.82 -1.3 43,403 + GFF4947 0.82 +0.0 43,403 + GFF4947 0.82 +0.4 43,404 - GFF4947 0.82 -0.6 43,720 + -0.7 43,720 + -0.1 43,720 + -0.3 43,720 + -0.2 43,720 + -1.1 43,720 + +0.2 43,720 + +0.2 43,720 + +0.4 43,720 + -1.6 43,720 + +0.3 43,721 - +0.0 43,721 - +0.2 43,721 - -1.1 43,721 - +0.2 43,721 - -1.4 43,721 - +0.5 43,721 - -0.5 43,721 - -0.4 43,721 - -0.7 43,721 - +0.1 43,721 - +0.6 43,721 - -0.5 43,721 - -0.2 43,743 + -0.4 43,743 + +0.4 43,744 - +0.5 43,855 - -0.8 43,975 + GFF4948 0.12 +0.9 43,976 - GFF4948 0.12 -1.5 43,976 - GFF4948 0.12 -0.6 44,008 + GFF4948 0.15 -0.1 44,009 - GFF4948 0.16 +0.6 44,009 - GFF4948 0.16 -0.2 44,023 + GFF4948 0.17 -1.5 44,024 - GFF4948 0.17 -0.3 44,090 - GFF4948 0.23 -0.0 44,479 + GFF4948 0.60 -0.3 44,480 - GFF4948 0.61 +0.4
Or see this region's nucleotide sequence