Experiment: no phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2695 and GFF2696 are separated by 19 nucleotides GFF2696 and GFF2697 overlap by 1 nucleotides GFF2697 and GFF2698 are separated by 49 nucleotides GFF2698 and GFF2699 are separated by 27 nucleotides
GFF2695 - no description, at 123,533 to 124,543
GFF2695
GFF2696 - L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43), at 124,563 to 125,501
GFF2696
GFF2697 - Oxidoreductase, short-chain dehydrogenase/reductase family, at 125,501 to 126,262
GFF2697
GFF2698 - Transcriptional regulator, LysR family, at 126,312 to 127,226
GFF2698
GFF2699 - 4Fe-4S ferredoxin, iron-sulfur binding, at 127,254 to 127,589
GFF2699
Position (kb) 125
126
127 Strain fitness (log2 ratio) -1
0
1 at 125.108 kb on - strand, within GFF2696 at 125.108 kb on - strand, within GFF2696 at 125.791 kb on - strand, within GFF2697 at 125.791 kb on - strand, within GFF2697 at 125.940 kb on + strand, within GFF2697 at 125.940 kb on + strand, within GFF2697 at 125.941 kb on - strand, within GFF2697 at 126.862 kb on + strand, within GFF2698 at 126.862 kb on + strand, within GFF2698 at 126.862 kb on + strand, within GFF2698 at 126.863 kb on - strand, within GFF2698 at 126.863 kb on - strand, within GFF2698 at 127.204 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction no phage control remove 125,108 - GFF2696 0.58 -1.5 125,108 - GFF2696 0.58 +0.1 125,791 - GFF2697 0.38 -0.1 125,791 - GFF2697 0.38 -0.1 125,940 + GFF2697 0.58 -0.8 125,940 + GFF2697 0.58 -0.7 125,941 - GFF2697 0.58 -0.5 126,862 + GFF2698 0.60 +0.8 126,862 + GFF2698 0.60 +1.5 126,862 + GFF2698 0.60 -0.3 126,863 - GFF2698 0.60 +1.1 126,863 - GFF2698 0.60 -0.4 127,204 + -1.4
Or see this region's nucleotide sequence